Class org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomyIntegrationTest
Tests
Test |
Duration |
Result |
testBadCatalog |
0.065s |
passed |
testBadTaxdump |
0.066s |
passed |
test[0](catalog.txt.gz, null, 0, tax.db) |
0.079s |
passed |
test[1](catalog.txt.gz, null, 50, tax_min50.db) |
0.067s |
passed |
test[2](null, genbank.txt.gz, 0, tax_genbank.db) |
0.067s |
passed |
Standard error
[March 28, 2025 at 10:44:22 PM UTC] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:44:23 PM UTC] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:44:23 PM UTC] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:44:23 PM UTC] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:44:23 PM UTC] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000