Class org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotatorIntegrationTest
Tests
| Test |
Duration |
Result |
| addQdToGvsVcf |
0.115s |
passed |
| testAgainstMutect2 |
2.844s |
passed |
| testComp |
0.146s |
passed |
| testDBSNP |
0.079s |
passed |
| testDeNovo |
0.133s |
passed |
| testNoReads |
0.079s |
passed |
| testResource |
0.219s |
passed |
| testValidationReadsDontMatch |
0.070s |
passed |
Standard error
[March 28, 2025 at 10:47:44 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:47 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:48 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:48 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008
[March 28, 2025 at 10:47:48 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1214251008