Class org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupCodecUnitTest

39

tests

0

failures

0

ignored

0.002s

duration

100%

successful

Tests

Test Duration Result
testCanDecode 0.001s passed
testDecodeLoc[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@22ccd80f) 0s passed
testDecode[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@58a01e47) 0.001s passed
testParseOneBaseAndQuality[0](A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4b7feb38) 0s passed
testParseOneBaseAndQuality[10](., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6a4859fc) 0s passed
testParseOneBaseAndQuality[11](,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6d49bd08) 0s passed
testParseOneBaseAndQuality[12](^~A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@31475919) 0s passed
testParseOneBaseAndQuality[13](^@a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@33e7ece5) 0s passed
testParseOneBaseAndQuality[14](^~., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@62f25e32) 0s passed
testParseOneBaseAndQuality[15](^@,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@48adb967) 0s passed
testParseOneBaseAndQuality[16](A$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@d181ca3) 0s passed
testParseOneBaseAndQuality[17](a$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@63f95ac1) 0s passed
testParseOneBaseAndQuality[18](.$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@59171a5d) 0s passed
testParseOneBaseAndQuality[19](,$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@46ae1e6b) 0s passed
testParseOneBaseAndQuality[1](a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@700f356b) 0s passed
testParseOneBaseAndQuality[20](+11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@c0d114b) 0s passed
testParseOneBaseAndQuality[21](+11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1692d173) 0s passed
testParseOneBaseAndQuality[22](+11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5626cb89) 0s passed
testParseOneBaseAndQuality[23](+11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@38dacb78) 0s passed
testParseOneBaseAndQuality[24](-11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@42017162) 0s passed
testParseOneBaseAndQuality[25](-11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@8eb1297) 0s passed
testParseOneBaseAndQuality[26](-11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3f2cc8ab) 0s passed
testParseOneBaseAndQuality[27](-11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2de4045a) 0s passed
testParseOneBaseAndQuality[28](A+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7b5ffde0) 0s passed
testParseOneBaseAndQuality[29](a+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@550a78ed) 0s passed
testParseOneBaseAndQuality[2](C, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@712ce4f1) 0s passed
testParseOneBaseAndQuality[30](.+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@b8f6500) 0s passed
testParseOneBaseAndQuality[31](,+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5e5d41dc) 0s passed
testParseOneBaseAndQuality[32](A-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@78a894fe) 0s passed
testParseOneBaseAndQuality[33](a-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@200cdb37) 0s passed
testParseOneBaseAndQuality[34](.-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6e8e1a98) 0s passed
testParseOneBaseAndQuality[35](,-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@65e503a7) 0s passed
testParseOneBaseAndQuality[3](c, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3770dd80) 0s passed
testParseOneBaseAndQuality[4](T, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@136bd1d1) 0s passed
testParseOneBaseAndQuality[5](t, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@74d736f8) 0s passed
testParseOneBaseAndQuality[6](G, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@90efbba) 0s passed
testParseOneBaseAndQuality[7](g, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@52b7d2d3) 0s passed
testParseOneBaseAndQuality[8](N, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5ab780ce) 0s passed
testParseOneBaseAndQuality[9](n, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7b1466e3) 0s passed