Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.761s |
passed |
| testAllosome |
0.603s |
passed |
| testCleanedVcf |
1.012s |
passed |
| testClusterMaxClique[0](true) |
1.102s |
passed |
| testClusterMaxClique[1](false) |
1.042s |
passed |
| testClusterSampleOverlap |
0.887s |
passed |
| testClusterSingleLinkage |
1.016s |
passed |
| testDefragmentation |
0.383s |
passed |
| testMergeHelper[0](true) |
0.549s |
passed |
| testMergeHelper[1](false) |
0.550s |
passed |
Standard error
[May 19, 2025 at 7:22:54 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:22:55 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:22:56 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:22:57 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:22:59 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:22:59 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:23:00 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:23:01 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:23:01 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1589641216
[May 19, 2025 at 7:23:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1589641216