Class org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest

1

tests

0

failures

0

ignored

0.021s

duration

100%

successful

Tests

Test Duration Result
testGetDefaultToolVCFHeaderLines 0.021s passed

Standard error

19:01:58.657 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
19:01:58.657 INFO  TestGATKSparkToolWithVariants - The Genome Analysis Toolkit (GATK) v4.6.2.0-5-g0192957-SNAPSHOT
19:01:58.657 INFO  TestGATKSparkToolWithVariants - For support and documentation go to https://software.broadinstitute.org/gatk/
19:01:58.657 INFO  TestGATKSparkToolWithVariants - Executing as root@41e59f58627b on Linux v6.11.0-1014-azure amd64
19:01:58.657 INFO  TestGATKSparkToolWithVariants - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
19:01:58.657 INFO  TestGATKSparkToolWithVariants - Start Date/Time: May 19, 2025 at 7:01:58 PM GMT
19:01:58.657 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
19:01:58.657 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
19:01:58.657 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.COMPRESSION_LEVEL : 2
19:01:58.658 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
19:01:58.658 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
19:01:58.658 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
19:01:58.658 INFO  TestGATKSparkToolWithVariants - Deflater: IntelDeflater
19:01:58.658 INFO  TestGATKSparkToolWithVariants - Inflater: IntelInflater
19:01:58.658 INFO  TestGATKSparkToolWithVariants - GCS max retries/reopens: 20
19:01:58.658 INFO  TestGATKSparkToolWithVariants - Requester pays: disabled
19:01:58.658 INFO  TestGATKSparkToolWithVariants - Initializing engine
19:01:58.658 INFO  TestGATKSparkToolWithVariants - Done initializing engine
19:01:58.658 INFO  TestGATKSparkToolWithVariants - Spark verbosity set to INFO (see --spark-verbosity argument)
19:01:58.659 INFO  TestGATKSparkToolWithVariants - Shutting down engine
[May 19, 2025 at 7:01:58 PM GMT] org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest$TestGATKSparkToolWithVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1115684864