| Test |
Duration |
Result |
| testEmptyPileup |
0.003s |
passed |
| testFixOverlappingQualitiesDeletedElements |
0s |
passed |
| testFixPairOverlappingQualitiesCap |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0.002s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0s |
passed |
| testFixPairOverlappingQualities[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualities[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testGetPileup |
0.004s |
passed |
| testGetPileupForSample |
0.003s |
passed |
| testInvalidConstructorParametersReadsAndOffsetsLists |
0s |
passed |
| testOverlappingFragmentFilter |
0s |
passed |
| testReadPileupCountingTestSinglePileup[0](ReadPileupCountTest{sample='sample75395b8f-3f83-4b02-8139-a9c7e7a47656', nReads=10, nMapq0=0, nDeletions=0}) |
0.004s |
passed |
| testReadPileupCountingTestSinglePileup[10](ReadPileupCountTest{sample='sample46ab0aa4-dab4-4709-803b-36587d263ea5', nReads=30, nMapq0=10, nDeletions=0}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[11](ReadPileupCountTest{sample='sampled78c4e80-e693-4d02-993d-bf7e8246fd7b', nReads=20, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[12](ReadPileupCountTest{sample='sample357aa54c-6a8d-4bc9-a24e-6e5340663195', nReads=30, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[13](ReadPileupCountTest{sample='sampleeca2e38a-3020-4b8e-be4b-6cfe97c43a87', nReads=40, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[14](ReadPileupCountTest{sample='sample2f8ebada-44c7-4bc3-b301-fea4199f9bdb', nReads=30, nMapq0=10, nDeletions=20}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[15](ReadPileupCountTest{sample='sampled0b3a0b7-cc4e-41d8-95a0-539b0d6827c6', nReads=40, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[16](ReadPileupCountTest{sample='samplee1d5f0ca-c9ea-46a2-8265-0536b7ad4f1c', nReads=50, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[17](ReadPileupCountTest{sample='sample573e432a-4523-4771-9162-a7578dafd24b', nReads=20, nMapq0=20, nDeletions=0}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[18](ReadPileupCountTest{sample='sample409b3fb1-924f-4024-ad78-b7388658ec57', nReads=30, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[19](ReadPileupCountTest{sample='samplec5c0e93c-c5ad-4e6c-b20f-28aa8ba9f07d', nReads=40, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[1](ReadPileupCountTest{sample='samplebd8f92fd-7db7-4f1a-95bb-4b5ec09fdbda', nReads=20, nMapq0=0, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[20](ReadPileupCountTest{sample='sample1bf4a965-a4e3-4cff-9301-0e0c47de921e', nReads=30, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[21](ReadPileupCountTest{sample='sample03fd3d08-3a48-40d1-a231-e971234bc453', nReads=40, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[22](ReadPileupCountTest{sample='samplef23618f3-562d-4f23-83d2-2d39ed3b18b1', nReads=50, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[23](ReadPileupCountTest{sample='samplee6c4837f-8549-46e8-b9df-daf12a0f29d5', nReads=40, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[24](ReadPileupCountTest{sample='sample47c705eb-2bd2-4a4d-b5bf-dfbf11a24612', nReads=50, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[25](ReadPileupCountTest{sample='sample12ef1ffb-d131-4b40-85ab-13a7b4b5bf6e', nReads=60, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[2](ReadPileupCountTest{sample='sample311d4ee3-424f-4f22-995f-8b55f37bc7dc', nReads=10, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[3](ReadPileupCountTest{sample='sample98816880-280c-43ae-984c-a0d1eec0ac8c', nReads=20, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[4](ReadPileupCountTest{sample='sample71fe0df6-6ac0-4d77-8893-b7b8c67b2bd2', nReads=30, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[5](ReadPileupCountTest{sample='sample06dd1f06-024f-4a15-964f-cde93e336783', nReads=20, nMapq0=0, nDeletions=20}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[6](ReadPileupCountTest{sample='sampleaad1080f-670d-4864-86ca-eb0c31c8bc9f', nReads=30, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[7](ReadPileupCountTest{sample='sample31305f73-d9b7-4d0f-85d1-fe9f86b8e1d9', nReads=40, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[8](ReadPileupCountTest{sample='samplef7bc80ec-271d-4b94-acd0-8b47b07afb87', nReads=10, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[9](ReadPileupCountTest{sample='sample25e47e31-a285-4f3b-a570-ed2a0c1fb10d', nReads=20, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupMappingQuals |
0s |
passed |
| testSimplePileup |
0.002s |
passed |
| testSimplePileupWithIndelsOffset |
0.001s |
passed |
| testSimplePileupWithOffset |
0.002s |
passed |
| testSortedIterator |
0s |
passed |
| testSplitByNullReadGroups |
0s |
passed |
| testSplitByReadGroup |
0.001s |
passed |
| testSplitBySampleMissingReadGroupException |
0.001s |
passed |