Class org.broadinstitute.hellbender.utils.spark.SparkUtilsUnitTest

20

tests

0

failures

1

ignored

4.357s

duration

100%

successful

Tests

Test Duration Result
testConvertHeaderlessHadoopBamShardToBam 0.005s passed
testInvalidSort 1.401s passed
testPathExists - ignored
testPutReadsWithSameNameInSamePartition[0](1, 1, 2, [I@5367effe) 0.627s passed
testPutReadsWithSameNameInSamePartition[10](20, 7, 5, [I@4e0b7099) 0.062s passed
testPutReadsWithSameNameInSamePartition[1](2, 2, 2, [I@42d2f4db) 0.081s passed
testPutReadsWithSameNameInSamePartition[2](3, 2, 2, [I@5b22d3e3) 0.084s passed
testPutReadsWithSameNameInSamePartition[3](3, 3, 2, [I@55766e96) 0.074s passed
testPutReadsWithSameNameInSamePartition[4](6, 2, 2, [I@3c9e1b29) 0.058s passed
testPutReadsWithSameNameInSamePartition[5](6, 3, 2, [I@303fe447) 0.064s passed
testPutReadsWithSameNameInSamePartition[6](6, 4, 2, [I@7f0223e3) 0.063s passed
testPutReadsWithSameNameInSamePartition[7](2, 2, 3, [I@1439bce2) 0.050s passed
testPutReadsWithSameNameInSamePartition[8](3, 2, 10, [I@154c79fc) 0.042s passed
testPutReadsWithSameNameInSamePartition[9](6, 4, 3, [I@3589dc82) 0.056s passed
testReadsMustBeQueryGroupedToFixPartitions 0.001s passed
testReadsPairsSpanningMultiplePartitions 0.327s passed
testSortCoordinateSortMatchesHtsjdk 0.439s passed
testSortQuerynameFixesPartitionBoundaries 0.240s passed
testSortQuerynameSortMatchesHtsjdk 0.614s passed
testSortUsingElementsAsKeys 0.069s passed

Standard error

19:14:02.914 WARN  SparkContextFactory - Environment variables HELLBENDER_TEST_PROJECT and HELLBENDER_JSON_SERVICE_ACCOUNT_KEY must be set or the GCS hadoop connector will not be configured properly
19:14:03.357 WARN  NativeCodeLoader - Unable to load native-hadoop library for your platform... using builtin-java classes where applicable