Class org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotatorIntegrationTest
Tests
| Test |
Duration |
Result |
| addQdToGvsVcf |
0.120s |
passed |
| testAgainstMutect2 |
3.539s |
passed |
| testComp |
0.150s |
passed |
| testDBSNP |
0.079s |
passed |
| testDeNovo |
0.116s |
passed |
| testNoReads |
0.071s |
passed |
| testResource |
0.219s |
passed |
| testValidationReadsDontMatch |
0.065s |
passed |
Standard error
[May 19, 2025 at 7:02:25 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:27 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:28 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:28 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:28 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:28 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:28 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:28 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824
[May 19, 2025 at 7:02:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1335885824