Standard error
18:46:04.392 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
18:46:04.392 INFO TestEmitUncoveredLociTool - org.broadinstitute.hellbender.engine vUnavailable
18:46:04.392 INFO TestEmitUncoveredLociTool - For support and documentation go to https://software.broadinstitute.org/gatk/
18:46:04.393 INFO TestEmitUncoveredLociTool - Executing as runner@pkrvmf6wy0o8zjz on Linux v6.11.0-1014-azure amd64
18:46:04.393 INFO TestEmitUncoveredLociTool - Java runtime: OpenJDK 64-Bit Server VM v17.0.6+10
18:46:04.393 INFO TestEmitUncoveredLociTool - Start Date/Time: May 19, 2025 at 6:46:04 PM UTC
18:46:04.393 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
18:46:04.393 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
18:46:04.393 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.COMPRESSION_LEVEL : 2
18:46:04.393 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
18:46:04.393 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
18:46:04.393 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
18:46:04.393 INFO TestEmitUncoveredLociTool - Deflater: IntelDeflater
18:46:04.393 INFO TestEmitUncoveredLociTool - Inflater: IntelInflater
18:46:04.393 INFO TestEmitUncoveredLociTool - GCS max retries/reopens: 20
18:46:04.393 INFO TestEmitUncoveredLociTool - Requester pays: disabled
18:46:04.393 INFO TestEmitUncoveredLociTool - Initializing engine
18:46:04.397 INFO IntervalArgumentCollection - Processing 10 bp from intervals
18:46:04.397 INFO TestEmitUncoveredLociTool - Done initializing engine
18:46:04.397 INFO ProgressMeter - Starting traversal
18:46:04.398 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
18:46:04.400 INFO TestEmitUncoveredLociTool - 0 read(s) filtered by: WellformedReadFilter
0 read(s) filtered by: MappedReadFilter
0 total reads filtered out of 5 reads processed
18:46:04.400 INFO ProgressMeter - unmapped 0.0 10 300000.0
18:46:04.400 INFO ProgressMeter - Traversal complete. Processed 10 total loci in 0.0 minutes.
18:46:04.400 INFO TestEmitUncoveredLociTool - Shutting down engine
[May 19, 2025 at 6:46:04 PM UTC] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestEmitUncoveredLociTool done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=629145600
18:46:04.405 INFO TestTransformedLocusWalker - ------------------------------------------------------------
18:46:04.405 INFO TestTransformedLocusWalker - org.broadinstitute.hellbender.engine vUnavailable
18:46:04.405 INFO TestTransformedLocusWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
18:46:04.405 INFO TestTransformedLocusWalker - Executing as runner@pkrvmf6wy0o8zjz on Linux v6.11.0-1014-azure amd64
18:46:04.405 INFO TestTransformedLocusWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.6+10
18:46:04.406 INFO TestTransformedLocusWalker - Start Date/Time: May 19, 2025 at 6:46:04 PM UTC
18:46:04.406 INFO TestTransformedLocusWalker - ------------------------------------------------------------
18:46:04.406 INFO TestTransformedLocusWalker - ------------------------------------------------------------
18:46:04.406 INFO TestTransformedLocusWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
18:46:04.406 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
18:46:04.406 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
18:46:04.406 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
18:46:04.406 INFO TestTransformedLocusWalker - Deflater: IntelDeflater
18:46:04.406 INFO TestTransformedLocusWalker - Inflater: IntelInflater
18:46:04.406 INFO TestTransformedLocusWalker - GCS max retries/reopens: 20
18:46:04.406 INFO TestTransformedLocusWalker - Requester pays: disabled
18:46:04.406 INFO TestTransformedLocusWalker - Initializing engine
18:46:04.409 INFO IntervalArgumentCollection - Processing 1 bp from intervals
18:46:04.409 INFO TestTransformedLocusWalker - Done initializing engine
18:46:04.409 INFO ProgressMeter - Starting traversal
18:46:04.409 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
18:46:04.411 INFO TestTransformedLocusWalker - 0 read(s) filtered by:
18:46:04.411 INFO ProgressMeter - unmapped 0.0 1 30000.0
18:46:04.411 INFO ProgressMeter - Traversal complete. Processed 1 total loci in 0.0 minutes.
18:46:04.411 INFO TestTransformedLocusWalker - Shutting down engine
[May 19, 2025 at 6:46:04 PM UTC] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestTransformedLocusWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=629145600