Class org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegmentsIntegrationTest
Tests
| Test |
Duration |
Result |
| testAllelicCountsOutOfDictionaryBounds |
0.079s |
passed |
| testAllelicCountsSampleNameMismatch |
0.078s |
passed |
| testDenoisedCopyRatiosOutOfDictionaryBounds |
0.089s |
passed |
| testDenoisedCopyRatiosSampleNameMismatch |
0.077s |
passed |
| testInGatkLiteDocker |
0.072s |
passed |
| testMinimumContigLength |
0.083s |
passed |
| testModeledSegmentsOutOfDictionaryBounds |
0.087s |
passed |
| testModeledSegmentsSampleNameMismatch |
0.081s |
passed |
| testModeledSegmentsWithWrongNumPointsAlleleFraction |
0.079s |
passed |
| testModeledSegmentsWithWrongNumPointsCopyRatio |
0.078s |
passed |
| testNonExistentAllelicCountsFile |
0.085s |
passed |
| testNonExistentDenoisedCopyRatiosFile |
0.073s |
passed |
| testNonExistentModeledSegmentsFile |
0.078s |
passed |
| testNonExistentSequenceDictionaryFile |
0.086s |
passed |
Standard error
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:25 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:26 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
[June 12, 2025 at 8:52:26 PM GMT] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000