Class org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariatesIntegrationTest
Tests
| Test |
Duration |
Result |
| testCsvGeneration |
0.792s |
passed |
| testInGatkLiteDocker |
0.076s |
passed |
| testInOutAbsenceException[0](true, false, false, false, false) |
0.071s |
passed |
| testParameterChangeException[0](after-noDp.table.gz, Unset the default platform) |
0.482s |
passed |
| testParameterChangeException[1](after-mcs4.table.gz, Changed -mcs parameter from 2 to 4) |
0.517s |
passed |
Standard output
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[21:02:47] Executing test AnalyzeCovariatesIntegrationTest:testCsvGeneration
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[21:02:48] Executing test AnalyzeCovariatesIntegrationTest:testInGatkLiteDocker
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[21:02:48] Executing test AnalyzeCovariatesIntegrationTest:testInOutAbsencePresenceException
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[21:02:48] Executing test AnalyzeCovariatesIntegrationTest:testParameterChangeException - Unset the default platform
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[21:02:49] Executing test AnalyzeCovariatesIntegrationTest:testParameterChangeException - Changed -mcs parameter from 2 to 4
Standard error
[June 12, 2025 at 9:02:48 PM GMT] org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariates done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1382023168
[June 12, 2025 at 9:02:48 PM GMT] org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariates done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1382023168
[June 12, 2025 at 9:02:48 PM GMT] org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariates done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1382023168
[June 12, 2025 at 9:02:49 PM GMT] org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariates done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1382023168
[June 12, 2025 at 9:02:49 PM GMT] org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariates done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1382023168