Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.700s |
passed |
| testAllosome |
0.621s |
passed |
| testCleanedVcf |
1.012s |
passed |
| testClusterMaxClique[0](true) |
1.219s |
passed |
| testClusterMaxClique[1](false) |
1.040s |
passed |
| testClusterSampleOverlap |
0.986s |
passed |
| testClusterSingleLinkage |
1.008s |
passed |
| testDefragmentation |
0.393s |
passed |
| testMergeHelper[0](true) |
0.560s |
passed |
| testMergeHelper[1](false) |
0.561s |
passed |
Standard error
[June 12, 2025 at 9:09:39 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:40 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:41 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:42 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:44 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:45 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:46 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:46 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:46 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1300234240
[June 12, 2025 at 9:09:47 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1300234240