Class org.broadinstitute.hellbender.tools.spark.PileupSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| testFeaturesPileupHdfs[0](false) |
2.266s |
passed |
| testFeaturesPileupHdfs[1](true) |
2.033s |
passed |
| testFeaturesPileup[0](false) |
0.918s |
passed |
| testFeaturesPileup[1](true) |
0.594s |
passed |
| testInsertLengthPileup[0](false) |
0.467s |
passed |
| testInsertLengthPileup[1](true) |
0.387s |
passed |
| testSimplePileup[0](false) |
0.493s |
passed |
| testSimplePileup[1](true) |
0.359s |
passed |
| testVerbosePileup[0](false) |
0.430s |
passed |
| testVerbosePileup[1](true) |
0.368s |
passed |
Standard error
[June 12, 2025 at 8:44:34 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:35 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:37 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
20:44:37.352 ERROR DataNode - Command processor encountered interrupt and exit.
[June 12, 2025 at 8:44:39 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
20:44:39.391 ERROR DataNode - Command processor encountered interrupt and exit.
[June 12, 2025 at 8:44:39 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:40 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:40 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1069547520
[June 12, 2025 at 8:44:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1069547520