Class org.broadinstitute.hellbender.tools.spark.sv.integration.SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest

all > org.broadinstitute.hellbender.tools.spark.sv.integration > SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest
2

tests
0

failures
0

ignored
5.543s

duration
100%

successful

Tests

Test Duration Result
testDiscoverVariantsRunnableLocal[0](org.broadinstitute.hellbender.tools.spark.sv.integration.SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest$TestArgs@3a59d21e, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_NonComplex.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_Complex.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_cpx_reinterpreted_simple_1_seg.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_cpx_reinterpreted_simple_multi_seg.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_merged_simple.vcf) 2.916s passed
testDiscoverVariantsRunnableLocal[1](org.broadinstitute.hellbender.tools.spark.sv.integration.SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest$TestArgs@3857660, /home/runner/work/gatk/gatk/src/test/resources/large//sv/forBND_SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_NonComplex.vcf, null, null, null, /home/runner/work/gatk/gatk/src/test/resources/large//sv/forBND_SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_merged_simple.vcf) 2.627s passed

Standard error

[June 12, 2025 at 8:47:10 PM UTC] org.broadinstitute.hellbender.tools.spark.sv.discovery.SvDiscoverFromLocalAssemblyContigAlignmentsSpark done. Elapsed time: 0.05 minutes.
Runtime.totalMemory()=847249408
[June 12, 2025 at 8:47:13 PM UTC] org.broadinstitute.hellbender.tools.spark.sv.discovery.SvDiscoverFromLocalAssemblyContigAlignmentsSpark done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=817889280