Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.670s |
passed |
| testAllosome |
0.587s |
passed |
| testCleanedVcf |
1.047s |
passed |
| testClusterMaxClique[0](true) |
1.123s |
passed |
| testClusterMaxClique[1](false) |
1.103s |
passed |
| testClusterSampleOverlap |
0.998s |
passed |
| testClusterSingleLinkage |
0.968s |
passed |
| testDefragmentation |
0.382s |
passed |
| testMergeHelper[0](true) |
0.523s |
passed |
| testMergeHelper[1](false) |
0.529s |
passed |
Standard error
[June 12, 2025 at 8:54:39 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=910163968
[June 12, 2025 at 8:54:40 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=910163968
[June 12, 2025 at 8:54:41 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=910163968
[June 12, 2025 at 8:54:42 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1384120320
[June 12, 2025 at 8:54:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1384120320
[June 12, 2025 at 8:54:44 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1384120320
[June 12, 2025 at 8:54:45 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1384120320
[June 12, 2025 at 8:54:45 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1384120320
[June 12, 2025 at 8:54:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1384120320
[June 12, 2025 at 8:54:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1384120320