Package org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode
|
99%
successful |
Failed tests
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[24](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@65589d76, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@dbea0065, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@b2eafe0a, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[25](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@4d484961, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@dbea0065, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@b2eafe0a, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[28](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@7d1f906b, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@dbea0065, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@c669cb10, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[29](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@72933ccb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e039d4ca, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@c219f6ab, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[30](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@71b38b11, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@8a2411b1, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[31](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@17fd9fbb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a3f41b6b, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[32](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@6eec092, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@dbea0065, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@d148ef4c, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[33](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@75f2a654, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@eb18f906, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@c219f6ab, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[34](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@20e43235, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@dbea0065, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@b2eafe0a, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[35](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@5c190662, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@ccbb07c4, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@c219f6ab, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[36](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@796eeafb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@27e6cb2f, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[37](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@d374c01, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@41b6d4e9, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[38](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@5e9355a6, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@fd49d9ef, -8)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[39](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@34788780, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@1719e3a9, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, 8)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[40](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@65669def, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@d7fe5f47, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[41](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@2889d997, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f1ce6901, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[42](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@5f7cc6fd, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7474b7d3, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[43](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@62ee32c6, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@8e44c18d, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[46](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@51f714d1, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, -8)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[47](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@4f355321, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f49dd4bf, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@e6dde79, 8)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[0]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7392614c, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@14aaaceb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a9d430af], [ENST0000002.3], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[10]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a2fae84e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@fe083fd6], [ENST0000003.8], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[1]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7392614c, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@14aaaceb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a9d430af], [ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[2]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@4dc0fb96, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@14aaaceb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a9d430af], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[3]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@4dc0fb96, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@14aaaceb, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a9d430af], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[4]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@4dc0fb96, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@14aaaceb], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[5]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@4dc0fb96, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@eed94735], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[6]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@3e9202f5, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@fe083fd6], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[7]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@da582c94, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@fe083fd6], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[8]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@566d00c6, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@fe083fd6], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[9]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@a2fae84e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@fe083fd6], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
Classes
| Class | Tests | Failures | Ignored | Duration | Success rate |
|---|---|---|---|---|---|
| GencodeFuncotationFactoryUnitTest | 5143 | 31 | 1 | 6m1.84s | 99% |
| GencodeFuncotationUnitTest | 50 | 0 | 0 | 0.003s | 100% |
| SegmentExonUtilsUnitTest | 50 | 0 | 0 | 0.006s | 100% |