Standard error
20:47:49.679 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
20:47:49.679 INFO TestEmitUncoveredLociTool - The Genome Analysis Toolkit (GATK) v4.6.2.0-13-g9eb1b78-SNAPSHOT
20:47:49.679 INFO TestEmitUncoveredLociTool - For support and documentation go to https://software.broadinstitute.org/gatk/
20:47:49.679 INFO TestEmitUncoveredLociTool - Executing as root@b6fedaba0a37 on Linux v6.11.0-1018-azure amd64
20:47:49.679 INFO TestEmitUncoveredLociTool - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
20:47:49.679 INFO TestEmitUncoveredLociTool - Start Date/Time: July 15, 2025 at 8:47:49 PM GMT
20:47:49.679 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
20:47:49.679 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
20:47:49.680 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.COMPRESSION_LEVEL : 2
20:47:49.680 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
20:47:49.680 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
20:47:49.680 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
20:47:49.680 INFO TestEmitUncoveredLociTool - Deflater: IntelDeflater
20:47:49.680 INFO TestEmitUncoveredLociTool - Inflater: IntelInflater
20:47:49.680 INFO TestEmitUncoveredLociTool - GCS max retries/reopens: 20
20:47:49.680 INFO TestEmitUncoveredLociTool - Requester pays: disabled
20:47:49.680 INFO TestEmitUncoveredLociTool - Initializing engine
20:47:49.685 INFO IntervalArgumentCollection - Processing 10 bp from intervals
20:47:49.685 INFO TestEmitUncoveredLociTool - Done initializing engine
20:47:49.685 INFO ProgressMeter - Starting traversal
20:47:49.685 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
20:47:49.687 INFO TestEmitUncoveredLociTool - 0 read(s) filtered by: WellformedReadFilter
0 read(s) filtered by: MappedReadFilter
0 total reads filtered out of 5 reads processed
20:47:49.687 INFO ProgressMeter - unmapped 0.0 10 300000.0
20:47:49.687 INFO ProgressMeter - Traversal complete. Processed 10 total loci in 0.0 minutes.
20:47:49.687 INFO TestEmitUncoveredLociTool - Shutting down engine
[July 15, 2025 at 8:47:49 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestEmitUncoveredLociTool done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=799014912
20:47:49.709 INFO TestTransformedLocusWalker - ------------------------------------------------------------
20:47:49.709 INFO TestTransformedLocusWalker - The Genome Analysis Toolkit (GATK) v4.6.2.0-13-g9eb1b78-SNAPSHOT
20:47:49.709 INFO TestTransformedLocusWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
20:47:49.709 INFO TestTransformedLocusWalker - Executing as root@b6fedaba0a37 on Linux v6.11.0-1018-azure amd64
20:47:49.709 INFO TestTransformedLocusWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
20:47:49.709 INFO TestTransformedLocusWalker - Start Date/Time: July 15, 2025 at 8:47:49 PM GMT
20:47:49.709 INFO TestTransformedLocusWalker - ------------------------------------------------------------
20:47:49.709 INFO TestTransformedLocusWalker - ------------------------------------------------------------
20:47:49.709 INFO TestTransformedLocusWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
20:47:49.709 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
20:47:49.709 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
20:47:49.709 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
20:47:49.709 INFO TestTransformedLocusWalker - Deflater: IntelDeflater
20:47:49.709 INFO TestTransformedLocusWalker - Inflater: IntelInflater
20:47:49.709 INFO TestTransformedLocusWalker - GCS max retries/reopens: 20
20:47:49.709 INFO TestTransformedLocusWalker - Requester pays: disabled
20:47:49.709 INFO TestTransformedLocusWalker - Initializing engine
20:47:49.714 INFO IntervalArgumentCollection - Processing 1 bp from intervals
20:47:49.714 INFO TestTransformedLocusWalker - Done initializing engine
20:47:49.714 INFO ProgressMeter - Starting traversal
20:47:49.714 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
20:47:49.716 INFO TestTransformedLocusWalker - 0 read(s) filtered by:
20:47:49.716 INFO ProgressMeter - unmapped 0.0 1 30000.0
20:47:49.716 INFO ProgressMeter - Traversal complete. Processed 1 total loci in 0.0 minutes.
20:47:49.716 INFO TestTransformedLocusWalker - Shutting down engine
[July 15, 2025 at 8:47:49 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestTransformedLocusWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=799014912