Class org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest

20:47:50.407 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
20:47:50.407 INFO  DummyMultiplePassVariantWalker - The Genome Analysis Toolkit (GATK) v4.6.2.0-13-g9eb1b78-SNAPSHOT
20:47:50.407 INFO  DummyMultiplePassVariantWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Executing as root@b6fedaba0a37 on Linux v6.11.0-1018-azure amd64
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Start Date/Time: July 15, 2025 at 8:47:50 PM GMT
20:47:50.407 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
20:47:50.407 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
20:47:50.407 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
20:47:50.407 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
20:47:50.407 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
20:47:50.407 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Deflater: IntelDeflater
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Inflater: IntelInflater
20:47:50.407 INFO  DummyMultiplePassVariantWalker - GCS max retries/reopens: 20
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Requester pays: disabled
20:47:50.407 INFO  DummyMultiplePassVariantWalker - Initializing engine
20:47:50.409 INFO  FeatureManager - Using codec VCFCodec to read file file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf
20:47:50.410 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
20:47:50.410 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
20:47:50.410 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
20:47:50.410 INFO  DummyMultiplePassVariantWalker - Done initializing engine
20:47:50.410 INFO  ProgressMeter - Starting traversal
20:47:50.410 INFO  ProgressMeter -        Current Locus  Elapsed Minutes    Variants Processed  Variants/Minute
20:47:50.410 INFO  DummyMultiplePassVariantWalker - Starting pass 0 through the variants
20:47:50.412 INFO  DummyMultiplePassVariantWalker - Finished pass 0 through the variants
20:47:50.412 INFO  DummyMultiplePassVariantWalker - Starting pass 1 through the variants
20:47:50.413 INFO  DummyMultiplePassVariantWalker - Finished pass 1 through the variants
20:47:50.413 INFO  DummyMultiplePassVariantWalker - No variants filtered by: AllowAllVariantsVariantFilter
20:47:50.413 INFO  DummyMultiplePassVariantWalker - 0 read(s) filtered by: AllowAllReadsReadFilter 

20:47:50.413 INFO  ProgressMeter -             unmapped              0.0                   104        2080000.0
20:47:50.413 INFO  ProgressMeter - Traversal complete. Processed 104 total variants in 0.0 minutes.
20:47:50.413 INFO  DummyMultiplePassVariantWalker - Shutting down engine
[July 15, 2025 at 8:47:50 PM GMT] org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest$DummyMultiplePassVariantWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=799014912