Test |
Duration |
Result |
testCreate[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp5028301420629407090.tar.gz, true, MODERATE) |
0.001s |
passed |
testCreate[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp26511562200357286201.fasta, false, MODERATE) |
0s |
passed |
testCreate[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp314624696541739714911.vcf, true, MINIMAL) |
0.001s |
passed |
testCreate[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp417208134096550437178.fasta, false, MINIMAL) |
0s |
passed |
testCreate[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp514086986569089258032.vcf, null, MINIMAL) |
0s |
passed |
testCreate[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp617414958717536381954.xsv, false, null) |
0s |
passed |
testCreate[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp716682432052640951145.vcf, null, null) |
0s |
passed |
testGetDest[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp3900724858383238978.tar.gz, true, MODERATE) |
0s |
passed |
testGetDest[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp212214090310089409432.fasta, false, MODERATE) |
0s |
passed |
testGetDest[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp312793136880516050458.vcf, true, MINIMAL) |
0.001s |
passed |
testGetDest[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp46572566248018690382.fasta, false, MINIMAL) |
0s |
passed |
testGetDest[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp517659260175593366213.vcf, null, MINIMAL) |
0s |
passed |
testGetDest[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp611194152891895937768.xsv, false, null) |
0.001s |
passed |
testGetDest[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp7661326601802810475.vcf, null, null) |
0s |
passed |
testGetSource[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp15182302849359435190.tar.gz, true, MODERATE) |
0s |
passed |
testGetSource[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp24571663763768512391.fasta, false, MODERATE) |
0s |
passed |
testGetSource[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp310704000516411781752.vcf, true, MINIMAL) |
0.001s |
passed |
testGetSource[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp44858498749689717901.fasta, false, MINIMAL) |
0s |
passed |
testGetSource[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp58249839908774332629.vcf, null, MINIMAL) |
0s |
passed |
testGetSource[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp615797930173508860419.xsv, false, null) |
0.001s |
passed |
testGetSource[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp74951076651305483480.vcf, null, null) |
0s |
passed |
testIsDoLogProgress[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp10901206391600128070.tar.gz, true, MODERATE) |
0s |
passed |
testIsDoLogProgress[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp23312293383415151937.fasta, false, MODERATE) |
0.001s |
passed |
testIsDoLogProgress[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp33455713675121723688.vcf, true, MINIMAL) |
0s |
passed |
testIsDoLogProgress[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp416765455353594685406.fasta, false, MINIMAL) |
0s |
passed |
testIsDoLogProgress[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp53205735760250619850.vcf, null, MINIMAL) |
0.001s |
passed |
testIsDoLogProgress[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp66797205733758114008.xsv, false, null) |
0s |
passed |
testIsDoLogProgress[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp712514443169081525899.vcf, null, null) |
0s |
passed |
testIsOverwriteExisting[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp10754923305882774017.tar.gz, true, MODERATE) |
0.001s |
passed |
testIsOverwriteExisting[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp21137112358210022688.fasta, false, MODERATE) |
0s |
passed |
testIsOverwriteExisting[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp31998085279001041909.vcf, true, MINIMAL) |
0s |
passed |
testIsOverwriteExisting[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp43995086435821631925.fasta, false, MINIMAL) |
0.001s |
passed |
testIsOverwriteExisting[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp53572570624654005704.vcf, null, MINIMAL) |
0s |
passed |
testIsOverwriteExisting[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp67117087360238884650.xsv, false, null) |
0s |
passed |
testIsOverwriteExisting[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp73200375822895358670.vcf, null, null) |
0.001s |
passed |
testSetOverwriteExisting[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp8677551467726767042.tar.gz, false, MODERATE, false) |
0s |
passed |
testSetOverwriteExisting[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp4415473101864005168.tar.gz, true, MODERATE, true) |
0s |
passed |
testSetVerbosity[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp18246366654072415343.tar.gz, true, MODERATE, MODERATE) |
0s |
passed |
testSetVerbosity[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp17574572783403247604.tar.gz, true, MINIMAL, MINIMAL) |
0s |
passed |
testSetVerbosity[2](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp14974182689943723713.tar.gz, true, SILENT, SILENT) |
0.001s |
passed |
testSetVerbosity[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp12402209804622482210.tar.gz, true, VERBOSE, VERBOSE) |
0s |
passed |
testSetVerbosity[4](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp5679847341456562966.tar.gz, true, null, MODERATE) |
0s |
passed |