| Test |
Duration |
Result |
| testEmptyPileup |
0.003s |
passed |
| testFixOverlappingQualitiesDeletedElements |
0s |
passed |
| testFixPairOverlappingQualitiesCap |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0.001s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0s |
passed |
| testFixPairOverlappingQualities[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualities[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testGetPileup |
0.004s |
passed |
| testGetPileupForSample |
0.002s |
passed |
| testInvalidConstructorParametersReadsAndOffsetsLists |
0s |
passed |
| testOverlappingFragmentFilter |
0s |
passed |
| testReadPileupCountingTestSinglePileup[0](ReadPileupCountTest{sample='sample6135f6c4-0b29-4953-a312-cd1f343ed4c0', nReads=10, nMapq0=0, nDeletions=0}) |
0.002s |
passed |
| testReadPileupCountingTestSinglePileup[10](ReadPileupCountTest{sample='sample4ed4c29f-017c-49b9-ab79-8a6ac296b8dc', nReads=30, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[11](ReadPileupCountTest{sample='sample228b6d90-3e50-478e-bf25-d616d29f746a', nReads=20, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[12](ReadPileupCountTest{sample='sample21eafc4d-af97-4903-bd3d-5baa7ffb4f23', nReads=30, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[13](ReadPileupCountTest{sample='sample762792b7-9f2a-4c6b-8527-dd4d6bc9eab2', nReads=40, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[14](ReadPileupCountTest{sample='sampledaa26750-36ae-4c96-9814-31d312a3f177', nReads=30, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[15](ReadPileupCountTest{sample='sample7429043b-ef4b-40ec-969e-471ab0fc7667', nReads=40, nMapq0=10, nDeletions=20}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[16](ReadPileupCountTest{sample='sample19cdb9e7-1ab7-431f-8734-8d46a37aa0cc', nReads=50, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[17](ReadPileupCountTest{sample='sampleae01b45d-6161-4a83-928a-4e9558552ce5', nReads=20, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[18](ReadPileupCountTest{sample='samplea927dd4c-e84c-4659-889d-c8d10dd0dbce', nReads=30, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[19](ReadPileupCountTest{sample='sample01b4d080-3f99-4e4c-857f-75f02ef7cc55', nReads=40, nMapq0=20, nDeletions=0}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[1](ReadPileupCountTest{sample='sample12fa75ff-adf7-4751-b5a3-b431be9ec9a4', nReads=20, nMapq0=0, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[20](ReadPileupCountTest{sample='sampledb966652-e82c-4f11-9768-ecd24581dff2', nReads=30, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[21](ReadPileupCountTest{sample='sampledb8ee01d-6a61-4e3f-b412-ec13e453f676', nReads=40, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[22](ReadPileupCountTest{sample='sample58ec3c88-4bdc-43b3-872b-fe9b1489d34b', nReads=50, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[23](ReadPileupCountTest{sample='sample014a0820-81ca-42a7-a280-756bb909f589', nReads=40, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[24](ReadPileupCountTest{sample='sample6ff61e7e-73ef-4015-ae29-0ae9f99b79fa', nReads=50, nMapq0=20, nDeletions=20}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[25](ReadPileupCountTest{sample='sample1ea0a788-d04c-4ae8-8ba1-0553510d5ad3', nReads=60, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[2](ReadPileupCountTest{sample='sampled709779d-6a2d-401e-9dd2-065cfe83f6b0', nReads=10, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[3](ReadPileupCountTest{sample='samplef6f4840c-b351-49c7-9fb1-03f0fd2b8dc0', nReads=20, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[4](ReadPileupCountTest{sample='sample08405894-ff3b-4b1b-bb7d-7682ade45eb1', nReads=30, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[5](ReadPileupCountTest{sample='sampled4cbb948-6493-4089-8b36-e37645ab41d1', nReads=20, nMapq0=0, nDeletions=20}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[6](ReadPileupCountTest{sample='samplebd86d3ec-e19e-43c0-94fa-680fd8ef078c', nReads=30, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[7](ReadPileupCountTest{sample='sample57b3afce-ec1e-4750-8c04-b83067d3ec38', nReads=40, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[8](ReadPileupCountTest{sample='sampleb5fe8b45-321f-433d-97d3-9ede9060b69f', nReads=10, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[9](ReadPileupCountTest{sample='sampleef59eb2d-b45a-40f7-9caf-dff561137a9e', nReads=20, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupMappingQuals |
0s |
passed |
| testSimplePileup |
0.002s |
passed |
| testSimplePileupWithIndelsOffset |
0.002s |
passed |
| testSimplePileupWithOffset |
0.002s |
passed |
| testSortedIterator |
0s |
passed |
| testSplitByNullReadGroups |
0.001s |
passed |
| testSplitByReadGroup |
0s |
passed |
| testSplitBySampleMissingReadGroupException |
0.001s |
passed |