Class org.broadinstitute.hellbender.utils.spark.SparkUtilsUnitTest

20

tests

0

failures

1

ignored

3.846s

duration

100%

successful

Tests

Test Duration Result
testConvertHeaderlessHadoopBamShardToBam 0.004s passed
testInvalidSort 1.269s passed
testPathExists - ignored
testPutReadsWithSameNameInSamePartition[0](1, 1, 2, [I@149ef180) 0.546s passed
testPutReadsWithSameNameInSamePartition[10](20, 7, 5, [I@3a7e6d4a) 0.063s passed
testPutReadsWithSameNameInSamePartition[1](2, 2, 2, [I@17605545) 0.062s passed
testPutReadsWithSameNameInSamePartition[2](3, 2, 2, [I@22af6f71) 0.060s passed
testPutReadsWithSameNameInSamePartition[3](3, 3, 2, [I@e2fad11) 0.056s passed
testPutReadsWithSameNameInSamePartition[4](6, 2, 2, [I@2fc4e8e4) 0.046s passed
testPutReadsWithSameNameInSamePartition[5](6, 3, 2, [I@5928f74d) 0.049s passed
testPutReadsWithSameNameInSamePartition[6](6, 4, 2, [I@afbd1a6) 0.052s passed
testPutReadsWithSameNameInSamePartition[7](2, 2, 3, [I@55a69984) 0.041s passed
testPutReadsWithSameNameInSamePartition[8](3, 2, 10, [I@48a2f2ed) 0.039s passed
testPutReadsWithSameNameInSamePartition[9](6, 4, 3, [I@1ee5e214) 0.050s passed
testReadsMustBeQueryGroupedToFixPartitions 0.002s passed
testReadsPairsSpanningMultiplePartitions 0.296s passed
testSortCoordinateSortMatchesHtsjdk 0.367s passed
testSortQuerynameFixesPartitionBoundaries 0.229s passed
testSortQuerynameSortMatchesHtsjdk 0.548s passed
testSortUsingElementsAsKeys 0.067s passed

Standard error

20:59:32.729 WARN  SparkContextFactory - Environment variables HELLBENDER_TEST_PROJECT and HELLBENDER_JSON_SERVICE_ACCOUNT_KEY must be set or the GCS hadoop connector will not be configured properly
20:59:33.072 WARN  NativeCodeLoader - Unable to load native-hadoop library for your platform... using builtin-java classes where applicable