Class org.broadinstitute.hellbender.tools.walkers.annotator.FragmentDepthPerAlleleBySampleUnitTest
Tests
Test |
Duration |
Result |
testDescription |
0.001s |
passed |
testUsingReads[0](10, 10, 10, 10, 10, 10) |
0.006s |
passed |
testUsingReads[1](0, 0, 0, 0, 0, 0) |
0.001s |
passed |
testUsingReads[2](1, 2, 3, 4, 5, 6) |
0.001s |
passed |
testUsingReads[3](1, 2, 3, 1, 2, 3) |
0s |
passed |
testUsingReads[4](1, 1, 2, 3, 5, 8) |
0.001s |
passed |
testUsingReads[5](2, 3, 5, 7, 11, 13) |
0.002s |
passed |
Standard error
20:41:58.408 DEBUG GenomeLocParser - Prepared reference sequence contig dictionary
20:41:58.408 DEBUG GenomeLocParser - 1 (16000 bp)
20:41:58.408 DEBUG GenomeLocParser - 2 (16000 bp)
20:41:58.408 DEBUG GenomeLocParser - 3 (16000 bp)
20:41:58.408 DEBUG GenomeLocParser - 4 (16000 bp)
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.413 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.416 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.416 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.416 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.417 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.417 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.417 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.418 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.418 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.419 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.419 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.419 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.419 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
20:41:58.419 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.