Class org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupCodecUnitTest

39

tests

0

failures

0

ignored

0.002s

duration

100%

successful

Tests

Test Duration Result
testCanDecode 0s passed
testDecodeLoc[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@78a894fe) 0s passed
testDecode[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@550a78ed) 0.001s passed
testParseOneBaseAndQuality[0](A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6e8e1a98) 0s passed
testParseOneBaseAndQuality[10](., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1926a40f) 0s passed
testParseOneBaseAndQuality[11](,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@68fac558) 0s passed
testParseOneBaseAndQuality[12](^~A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@34883fa2) 0.001s passed
testParseOneBaseAndQuality[13](^@a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1ecf19e8) 0s passed
testParseOneBaseAndQuality[14](^~., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@64d19dad) 0s passed
testParseOneBaseAndQuality[15](^@,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2cfde5a4) 0s passed
testParseOneBaseAndQuality[16](A$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@ffa60c9) 0s passed
testParseOneBaseAndQuality[17](a$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@41194707) 0s passed
testParseOneBaseAndQuality[18](.$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1ab64f66) 0s passed
testParseOneBaseAndQuality[19](,$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@28f307ca) 0s passed
testParseOneBaseAndQuality[1](a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@65e503a7) 0s passed
testParseOneBaseAndQuality[20](+11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@72e89ce2) 0s passed
testParseOneBaseAndQuality[21](+11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2b4b3918) 0s passed
testParseOneBaseAndQuality[22](+11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2e61695b) 0s passed
testParseOneBaseAndQuality[23](+11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@720f0fa2) 0s passed
testParseOneBaseAndQuality[24](-11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@84f0686) 0s passed
testParseOneBaseAndQuality[25](-11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@71103416) 0s passed
testParseOneBaseAndQuality[26](-11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@20b54b6e) 0s passed
testParseOneBaseAndQuality[27](-11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@69924070) 0s passed
testParseOneBaseAndQuality[28](A+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@430e9d37) 0s passed
testParseOneBaseAndQuality[29](a+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@32828624) 0s passed
testParseOneBaseAndQuality[2](C, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@42ffa0c8) 0s passed
testParseOneBaseAndQuality[30](.+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1e299e3f) 0s passed
testParseOneBaseAndQuality[31](,+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@372e01e0) 0s passed
testParseOneBaseAndQuality[32](A-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6f6db08) 0s passed
testParseOneBaseAndQuality[33](a-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@8d0d52a) 0s passed
testParseOneBaseAndQuality[34](.-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@f7b6b9e) 0s passed
testParseOneBaseAndQuality[35](,-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7923cb8d) 0s passed
testParseOneBaseAndQuality[3](c, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@19a652cd) 0s passed
testParseOneBaseAndQuality[4](T, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@23867b97) 0s passed
testParseOneBaseAndQuality[5](t, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4098a6b0) 0s passed
testParseOneBaseAndQuality[6](G, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4f042c70) 0s passed
testParseOneBaseAndQuality[7](g, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3c50ba07) 0s passed
testParseOneBaseAndQuality[8](N, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@78cb1a92) 0s passed
testParseOneBaseAndQuality[9](n, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@39c78cf9) 0s passed