Test |
Duration |
Result |
testCachingIndexedFastaReaderSequential1[0](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 1) |
0.188s |
passed |
testCachingIndexedFastaReaderSequential1[10](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 10) |
0.086s |
passed |
testCachingIndexedFastaReaderSequential1[11](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 100) |
0.098s |
passed |
testCachingIndexedFastaReaderSequential1[12](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 1) |
0.189s |
passed |
testCachingIndexedFastaReaderSequential1[13](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 10) |
0.219s |
passed |
testCachingIndexedFastaReaderSequential1[14](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 100) |
9.694s |
passed |
testCachingIndexedFastaReaderSequential1[15](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 1) |
0.094s |
passed |
testCachingIndexedFastaReaderSequential1[16](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 10) |
0.095s |
passed |
testCachingIndexedFastaReaderSequential1[17](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 100) |
0.108s |
passed |
testCachingIndexedFastaReaderSequential1[1](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 10) |
0.106s |
passed |
testCachingIndexedFastaReaderSequential1[2](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 100) |
0.092s |
passed |
testCachingIndexedFastaReaderSequential1[3](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 1) |
0.095s |
passed |
testCachingIndexedFastaReaderSequential1[4](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 10) |
0.082s |
passed |
testCachingIndexedFastaReaderSequential1[5](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 100) |
0.176s |
passed |
testCachingIndexedFastaReaderSequential1[6](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 1) |
0.082s |
passed |
testCachingIndexedFastaReaderSequential1[7](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 10) |
0.082s |
passed |
testCachingIndexedFastaReaderSequential1[8](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 100) |
0.092s |
passed |
testCachingIndexedFastaReaderSequential1[9](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 1) |
0.154s |
passed |
testCachingIndexedFastaReaderTwoStage[0](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 1) |
0.023s |
passed |
testCachingIndexedFastaReaderTwoStage[10](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 10) |
0.015s |
passed |
testCachingIndexedFastaReaderTwoStage[11](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 100) |
0.013s |
passed |
testCachingIndexedFastaReaderTwoStage[12](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 1) |
0.985s |
passed |
testCachingIndexedFastaReaderTwoStage[13](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 10) |
0.985s |
passed |
testCachingIndexedFastaReaderTwoStage[14](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 100) |
0.955s |
passed |
testCachingIndexedFastaReaderTwoStage[15](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 1) |
1.021s |
passed |
testCachingIndexedFastaReaderTwoStage[16](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 10) |
0.990s |
passed |
testCachingIndexedFastaReaderTwoStage[17](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 100) |
1.020s |
passed |
testCachingIndexedFastaReaderTwoStage[1](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 10) |
0.016s |
passed |
testCachingIndexedFastaReaderTwoStage[2](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 100) |
0.016s |
passed |
testCachingIndexedFastaReaderTwoStage[3](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 1) |
0.032s |
passed |
testCachingIndexedFastaReaderTwoStage[4](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 10) |
0.034s |
passed |
testCachingIndexedFastaReaderTwoStage[5](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 100, 100) |
0.033s |
passed |
testCachingIndexedFastaReaderTwoStage[6](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 1) |
0.045s |
passed |
testCachingIndexedFastaReaderTwoStage[7](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 10) |
0.040s |
passed |
testCachingIndexedFastaReaderTwoStage[8](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, 1000, 100) |
0.041s |
passed |
testCachingIndexedFastaReaderTwoStage[9](/home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta.gz, /home/runner/work/gatk/gatk/src/test/resources/exampleFASTA.fasta, -1, 1) |
0.012s |
passed |
testFailOnBadBase |
0.005s |
passed |
testIupacChanges |
0.003s |
passed |
testMixedCasesInExample |
0.008s |
passed |
testNonexistentReference |
0s |
passed |