Class org.broadinstitute.hellbender.tools.spark.PileupSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| testFeaturesPileupHdfs[0](false) |
1.741s |
passed |
| testFeaturesPileupHdfs[1](true) |
1.514s |
passed |
| testFeaturesPileup[0](false) |
0.846s |
passed |
| testFeaturesPileup[1](true) |
0.386s |
passed |
| testInsertLengthPileup[0](false) |
0.421s |
passed |
| testInsertLengthPileup[1](true) |
0.354s |
passed |
| testSimplePileup[0](false) |
0.401s |
passed |
| testSimplePileup[1](true) |
0.349s |
passed |
| testVerbosePileup[0](false) |
0.396s |
passed |
| testVerbosePileup[1](true) |
0.343s |
passed |
Standard error
[October 27, 2025 at 5:46:22 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:22 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:24 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
17:46:24.456 ERROR DataNode - Command processor encountered interrupt and exit.
[October 27, 2025 at 5:46:25 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
17:46:25.972 ERROR DataNode - Command processor encountered interrupt and exit.
[October 27, 2025 at 5:46:26 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:26 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:27 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:27 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:27 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=935329792
[October 27, 2025 at 5:46:28 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=935329792