Class org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContaminationIntegrationTest

all > org.broadinstitute.hellbender.tools.walkers.contamination > CalculateContaminationIntegrationTest
11

tests
0

failures
0

ignored
6.923s

duration
100%

successful

Tests

Test Duration Result
testArtificialData[0](true) 0.329s passed
testArtificialData[1](false) 0.278s passed
testMatchedNormal 1.598s passed
testSmallGenePanelErrorBars[0](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/small-panel-pileups1.tsv) 0.073s passed
testSmallGenePanelErrorBars[1](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/small-panel-pileups2.tsv) 0.071s passed
testSmallGenePanelErrorBars[2](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/small-panel-pileups3.tsv) 0.070s passed
testSmallGenePanelWithNoHomAlts 0.070s passed
testSpikeIn[0](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/NA12891_0.01_NA12892_0.99.table, 0.01, 0.001) 1.195s passed
testSpikeIn[1](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/NA12891_0.03_NA12892_0.97.table, 0.03, 0.001) 1.108s passed
testSpikeIn[2](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/NA12891_0.05_NA12892_0.95.table, 0.05, 0.001) 1.018s passed
testSpikeIn[3](src/test/resources/org/broadinstitute/hellbender/tools/calculatecontamination/NA12891_0.08_NA12892_0.92.table, 0.08, 0.001) 1.113s passed

Standard error

[October 27, 2025 at 5:52:12 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:12 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:15 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1797259264
[October 27, 2025 at 5:52:19 PM UTC] org.broadinstitute.hellbender.tools.walkers.contamination.CalculateContamination done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1797259264