Class org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSRIntegrationTest
Tests
| Test |
Duration |
Result |
| testApplyIndelRecalibration |
0.592s |
passed |
| testApplySNPRecalibration |
1.989s |
passed |
| testApplyVQSRAlleleSpecificINDELmode |
0.093s |
passed |
| testApplyVQSRAlleleSpecificINDELmodeGZIPIndex |
0.133s |
passed |
| testApplyVQSRAlleleSpecificSNPmode |
0.091s |
passed |
| testApplyVQSRSnpAndIndelTogether |
0.080s |
passed |
| testApplyVQSRSnpAndIndelTogetherExcludeFiltered |
0.078s |
passed |
Standard output
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[17:58:43] Executing test ApplyVQSRIntegrationTest:testApplyVQSRIndel
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[17:58:44] Executing test ApplyVQSRIntegrationTest:testApplyVQSRSNP
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[17:58:46] Executing test ApplyVQSRIntegrationTest:testApplyVQSRAlleleSpecificINDELmode
--------------------------------------------------------------------------------
[17:58:46] Executing test ApplyVQSRIntegrationTest:testApplyVQSRAlleleSpecificINDELmodeGZIP
--------------------------------------------------------------------------------
[17:58:46] Executing test ApplyVQSRIntegrationTest:testApplyVQSRAlleleSpecificSNPmode
--------------------------------------------------------------------------------
[17:58:46] Executing test ApplyVQSRIntegrationTest:testApplyVQSRSnpAndIndelTogether
Standard error
[October 27, 2025 at 5:58:44 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=769654784
[October 27, 2025 at 5:58:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=769654784
[October 27, 2025 at 5:58:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=769654784
[October 27, 2025 at 5:58:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=769654784
[October 27, 2025 at 5:58:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=769654784
[October 27, 2025 at 5:58:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=769654784
[October 27, 2025 at 5:58:46 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=769654784