Class org.broadinstitute.hellbender.tools.walkers.readorientation.LearnReadOrientationModelEngineUnitTest
Tests
| Test |
Duration |
Result |
| testComputeResponsibilities[0](15, 5, 5, [(HOM_REF,0.999), (F1R2_T,0.0010000000000000009)], [(HOM_REF,0.0), (F1R2_T,1.0)], 0.001) |
0s |
passed |
| testComputeResponsibilities[1](15, 5, 5, [], [(HOM_REF,0.0), (F1R2_T,0.7)], 0.2) |
0s |
passed |
| testComputeResponsibilities[2](50, 10, 10, [], [(F1R2_T,1.0)], 0.01) |
0s |
passed |
| testComputeResponsibilities[3](50, 10, 5, [], [(SOMATIC_HET,1.0)], 0.2) |
0s |
passed |
| testComputeResponsibilities[4](50, 25, 12, [], [(GERMLINE_HET,0.5)], 0.2) |
0s |
passed |
| testMergeDesignMatrices |
0.005s |
passed |
| testMergeHistograms |
0.004s |
passed |
| testMoreComplicatedCase |
0.121s |
passed |
| testReverseComplement |
0.261s |
passed |
| testSimpleCase |
0.048s |
passed |
Standard error
[October 27, 2025 at 5:46:41 PM UTC] org.broadinstitute.hellbender.tools.walkers.readorientation.LearnReadOrientationModel done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=629145600