Class org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| test[0](first5000a.bam, null) |
1.784s |
passed |
| test[1](first5000a.cram, /gatkCloneMountPoint/src/test/resources/large/human_g1k_v37.20.21.fasta) |
0.719s |
passed |
Standard error
14:18:38.928 INFO BlockManagerInfo - Removed broadcast_37_piece0 on localhost:43069 in memory (size: 50.1 KiB, free: 1919.4 MiB)
14:18:38.931 INFO BlockManagerInfo - Removed broadcast_26_piece0 on localhost:43069 in memory (size: 2.7 KiB, free: 1919.4 MiB)
14:18:38.934 INFO BlockManagerInfo - Removed broadcast_35_piece0 on localhost:43069 in memory (size: 10.2 KiB, free: 1919.5 MiB)
14:18:38.936 INFO BlockManagerInfo - Removed broadcast_41_piece0 on localhost:43069 in memory (size: 8.1 KiB, free: 1919.5 MiB)
14:18:38.938 INFO BlockManagerInfo - Removed broadcast_39_piece0 on localhost:43069 in memory (size: 50.1 KiB, free: 1919.5 MiB)
14:18:38.940 INFO BlockManagerInfo - Removed broadcast_40_piece0 on localhost:43069 in memory (size: 104.1 KiB, free: 1919.6 MiB)
14:18:38.943 INFO BlockManagerInfo - Removed broadcast_36_piece0 on localhost:43069 in memory (size: 239.0 B, free: 1919.6 MiB)
14:18:38.946 INFO BlockManagerInfo - Removed broadcast_38_piece0 on localhost:43069 in memory (size: 239.0 B, free: 1919.6 MiB)
14:18:38.950 INFO BlockManagerInfo - Removed broadcast_32_piece0 on localhost:43069 in memory (size: 50.1 KiB, free: 1919.7 MiB)
14:18:38.953 INFO BlockManagerInfo - Removed broadcast_30_piece0 on localhost:43069 in memory (size: 10.2 KiB, free: 1919.7 MiB)
14:18:38.955 INFO BlockManagerInfo - Removed broadcast_33_piece0 on localhost:43069 in memory (size: 153.7 KiB, free: 1919.8 MiB)
14:18:38.956 INFO BlockManagerInfo - Removed broadcast_31_piece0 on localhost:43069 in memory (size: 50.1 KiB, free: 1919.9 MiB)
14:18:38.958 INFO BlockManagerInfo - Removed broadcast_34_piece0 on localhost:43069 in memory (size: 8.1 KiB, free: 1919.9 MiB)
14:18:38.959 INFO BlockManagerInfo - Removed broadcast_28_piece0 on localhost:43069 in memory (size: 4.7 KiB, free: 1919.9 MiB)
14:18:38.960 INFO BlockManagerInfo - Removed broadcast_42_piece0 on localhost:43069 in memory (size: 10.2 KiB, free: 1919.9 MiB)
14:18:38.962 INFO BlockManagerInfo - Removed broadcast_29_piece0 on localhost:43069 in memory (size: 8.1 KiB, free: 1919.9 MiB)
14:18:38.963 INFO BlockManagerInfo - Removed broadcast_27_piece0 on localhost:43069 in memory (size: 50.1 KiB, free: 1919.9 MiB)
[January 22, 2026 at 2:18:40 PM GMT] org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=524288000
[January 22, 2026 at 2:18:40 PM GMT] org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=524288000