Class org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| test[0](first5000a.bam, null) |
1.894s |
passed |
| test[1](first5000a.cram, /gatkCloneMountPoint/src/test/resources/large/human_g1k_v37.20.21.fasta) |
0.842s |
passed |
Standard error
17:20:51.624 INFO BlockManagerInfo - Removed broadcast_28_piece0 on localhost:34551 in memory (size: 4.7 KiB, free: 1919.4 MiB)
17:20:51.628 INFO BlockManagerInfo - Removed broadcast_41_piece0 on localhost:34551 in memory (size: 8.1 KiB, free: 1919.4 MiB)
17:20:51.633 INFO BlockManagerInfo - Removed broadcast_33_piece0 on localhost:34551 in memory (size: 153.7 KiB, free: 1919.6 MiB)
17:20:51.639 INFO BlockManagerInfo - Removed broadcast_30_piece0 on localhost:34551 in memory (size: 10.2 KiB, free: 1919.6 MiB)
17:20:51.642 INFO BlockManagerInfo - Removed broadcast_29_piece0 on localhost:34551 in memory (size: 8.1 KiB, free: 1919.6 MiB)
17:20:51.644 INFO BlockManagerInfo - Removed broadcast_34_piece0 on localhost:34551 in memory (size: 8.1 KiB, free: 1919.6 MiB)
17:20:51.646 INFO BlockManagerInfo - Removed broadcast_38_piece0 on localhost:34551 in memory (size: 239.0 B, free: 1919.6 MiB)
17:20:51.649 INFO BlockManagerInfo - Removed broadcast_39_piece0 on localhost:34551 in memory (size: 50.1 KiB, free: 1919.6 MiB)
17:20:51.652 INFO BlockManagerInfo - Removed broadcast_40_piece0 on localhost:34551 in memory (size: 104.1 KiB, free: 1919.7 MiB)
17:20:51.657 INFO BlockManagerInfo - Removed broadcast_36_piece0 on localhost:34551 in memory (size: 239.0 B, free: 1919.7 MiB)
17:20:51.660 INFO BlockManagerInfo - Removed broadcast_37_piece0 on localhost:34551 in memory (size: 50.1 KiB, free: 1919.8 MiB)
17:20:51.661 INFO BlockManagerInfo - Removed broadcast_26_piece0 on localhost:34551 in memory (size: 2.7 KiB, free: 1919.8 MiB)
17:20:51.662 INFO BlockManagerInfo - Removed broadcast_35_piece0 on localhost:34551 in memory (size: 10.2 KiB, free: 1919.8 MiB)
17:20:51.665 INFO BlockManagerInfo - Removed broadcast_31_piece0 on localhost:34551 in memory (size: 50.1 KiB, free: 1919.8 MiB)
17:20:51.667 INFO BlockManagerInfo - Removed broadcast_42_piece0 on localhost:34551 in memory (size: 10.2 KiB, free: 1919.9 MiB)
17:20:51.669 INFO BlockManagerInfo - Removed broadcast_32_piece0 on localhost:34551 in memory (size: 50.1 KiB, free: 1919.9 MiB)
17:20:51.670 INFO BlockManagerInfo - Removed broadcast_27_piece0 on localhost:34551 in memory (size: 50.1 KiB, free: 1919.9 MiB)
[January 23, 2026 at 5:20:52 PM GMT] org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=524288000
[January 23, 2026 at 5:20:53 PM GMT] org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=524288000