| Test |
Duration |
Result |
| testBadAutosomalContigs |
2.824s |
passed |
| testDifferentInvalidInput[0](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
2.849s |
passed |
| testDifferentInvalidInput[10](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.741s |
passed |
| testDifferentInvalidInput[11](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.806s |
passed |
| testDifferentInvalidInput[1](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
2.803s |
passed |
| testDifferentInvalidInput[2](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
2.755s |
passed |
| testDifferentInvalidInput[3](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.697s |
passed |
| testDifferentInvalidInput[4](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.807s |
passed |
| testDifferentInvalidInput[5](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.692s |
passed |
| testDifferentInvalidInput[6](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.693s |
passed |
| testDifferentInvalidInput[7](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.704s |
passed |
| testDifferentInvalidInput[8](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.809s |
passed |
| testDifferentInvalidInput[9](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.734s |
passed |
| testDifferentValidInput[0](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
19.876s |
passed |
| testDifferentValidInput[1](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.376s |
passed |
| testDifferentValidInput[2](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.280s |
passed |
| testDifferentValidInput[3](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
8.324s |
passed |
| testDifferentValidInput[4](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
8.176s |
passed |
| testDifferentValidInput[5](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
8.301s |
passed |
| testDifferentValidInput[6](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.184s |
passed |
| testDifferentValidInput[7](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
7.994s |
passed |
| testDifferentValidInput[8](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.373s |
passed |
| testQualScoreCalculationWithBreakpoints |
24.999s |
passed |