Class org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCallerIntegrationTest
Tests
| Test |
Duration |
Result |
| testCase |
20.078s |
passed |
| testCaseWithHiddenArguments |
2.408s |
passed |
| testCaseWithoutModel |
2.425s |
passed |
| testCohortWithAnnotatedIntervals |
2m53.85s |
passed |
| testCohortWithInputModel |
29.105s |
passed |
| testCohortWithTwoIntervals |
27.076s |
passed |
| testCohortWithoutIntervalAnnotations |
31.184s |
passed |
| testNumericalAccuracy |
38.248s |
passed |
Standard error
[February 2, 2026 at 1:04:35 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:04:37 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:07:31 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 2.90 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:07:58 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.45 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:08:30 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.52 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:09:08 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.63 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:13:23 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.33 minutes.
Runtime.totalMemory()=524288000
[February 2, 2026 at 1:13:52 PM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.48 minutes.
Runtime.totalMemory()=524288000