Class org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCallerIntegrationTest
Tests
| Test |
Duration |
Result |
| testCase |
20.044s |
passed |
| testCaseWithHiddenArguments |
2.448s |
passed |
| testCaseWithoutModel |
2.451s |
passed |
| testCohortWithAnnotatedIntervals |
2m53.76s |
passed |
| testCohortWithInputModel |
29.507s |
passed |
| testCohortWithTwoIntervals |
27.689s |
passed |
| testCohortWithoutIntervalAnnotations |
30.814s |
passed |
| testNumericalAccuracy |
38.289s |
passed |
Standard error
[February 6, 2026 at 12:03:35 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:03:37 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:06:31 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 2.89 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:06:59 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.46 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:07:30 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.51 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:08:08 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.64 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:12:21 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.33 minutes.
Runtime.totalMemory()=524288000
[February 6, 2026 at 12:12:51 AM GMT] org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCaller done. Elapsed time: 0.49 minutes.
Runtime.totalMemory()=524288000