Standard error
15:09:17.759 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
15:09:17.759 INFO TestEmitUncoveredLociTool - The Genome Analysis Toolkit (GATK) vafter_master_merge-284-g4157897-SNAPSHOT
15:09:17.759 INFO TestEmitUncoveredLociTool - For support and documentation go to https://software.broadinstitute.org/gatk/
15:09:17.759 INFO TestEmitUncoveredLociTool - Executing as root@265a0ba1256d on Linux v6.14.0-1017-azure amd64
15:09:17.759 INFO TestEmitUncoveredLociTool - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
15:09:17.760 INFO TestEmitUncoveredLociTool - Start Date/Time: March 4, 2026 at 3:09:17 PM GMT
15:09:17.760 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
15:09:17.760 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
15:09:17.760 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.COMPRESSION_LEVEL : 2
15:09:17.760 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
15:09:17.760 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
15:09:17.760 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
15:09:17.760 INFO TestEmitUncoveredLociTool - Deflater: IntelDeflater
15:09:17.760 INFO TestEmitUncoveredLociTool - Inflater: IntelInflater
15:09:17.760 INFO TestEmitUncoveredLociTool - GCS max retries/reopens: 20
15:09:17.760 INFO TestEmitUncoveredLociTool - Requester pays: disabled
15:09:17.760 INFO TestEmitUncoveredLociTool - Initializing engine
15:09:17.765 INFO IntervalArgumentCollection - Processing 10 bp from intervals
15:09:17.765 INFO TestEmitUncoveredLociTool - Done initializing engine
15:09:17.765 INFO ProgressMeter - Starting traversal
15:09:17.765 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
15:09:17.767 INFO TestEmitUncoveredLociTool - 0 read(s) filtered by: WellformedReadFilter
0 read(s) filtered by: MappedReadFilter
0 total reads filtered out of 5 reads processed
15:09:17.767 INFO ProgressMeter - unmapped 0.0 10 300000.0
15:09:17.767 INFO ProgressMeter - Traversal complete. Processed 10 total loci in 0.0 minutes.
15:09:17.767 INFO TestEmitUncoveredLociTool - Shutting down engine
[March 4, 2026 at 3:09:17 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestEmitUncoveredLociTool done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=813694976
15:09:17.787 INFO TestTransformedLocusWalker - ------------------------------------------------------------
15:09:17.788 INFO TestTransformedLocusWalker - The Genome Analysis Toolkit (GATK) vafter_master_merge-284-g4157897-SNAPSHOT
15:09:17.788 INFO TestTransformedLocusWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
15:09:17.788 INFO TestTransformedLocusWalker - Executing as root@265a0ba1256d on Linux v6.14.0-1017-azure amd64
15:09:17.788 INFO TestTransformedLocusWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
15:09:17.788 INFO TestTransformedLocusWalker - Start Date/Time: March 4, 2026 at 3:09:17 PM GMT
15:09:17.788 INFO TestTransformedLocusWalker - ------------------------------------------------------------
15:09:17.788 INFO TestTransformedLocusWalker - ------------------------------------------------------------
15:09:17.788 INFO TestTransformedLocusWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
15:09:17.788 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
15:09:17.788 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
15:09:17.788 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
15:09:17.788 INFO TestTransformedLocusWalker - Deflater: IntelDeflater
15:09:17.788 INFO TestTransformedLocusWalker - Inflater: IntelInflater
15:09:17.788 INFO TestTransformedLocusWalker - GCS max retries/reopens: 20
15:09:17.788 INFO TestTransformedLocusWalker - Requester pays: disabled
15:09:17.788 INFO TestTransformedLocusWalker - Initializing engine
15:09:17.791 INFO IntervalArgumentCollection - Processing 1 bp from intervals
15:09:17.791 INFO TestTransformedLocusWalker - Done initializing engine
15:09:17.791 INFO ProgressMeter - Starting traversal
15:09:17.792 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
15:09:17.793 INFO TestTransformedLocusWalker - 0 read(s) filtered by:
15:09:17.793 INFO ProgressMeter - unmapped 0.0 1 60000.0
15:09:17.793 INFO ProgressMeter - Traversal complete. Processed 1 total loci in 0.0 minutes.
15:09:17.793 INFO TestTransformedLocusWalker - Shutting down engine
[March 4, 2026 at 3:09:17 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestTransformedLocusWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=813694976