Class org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest

15:09:18.390 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
15:09:18.390 INFO  DummyMultiplePassVariantWalker - The Genome Analysis Toolkit (GATK) vafter_master_merge-284-g4157897-SNAPSHOT
15:09:18.390 INFO  DummyMultiplePassVariantWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Executing as root@265a0ba1256d on Linux v6.14.0-1017-azure amd64
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Start Date/Time: March 4, 2026 at 3:09:18 PM GMT
15:09:18.390 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
15:09:18.390 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
15:09:18.390 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
15:09:18.390 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
15:09:18.390 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
15:09:18.390 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Deflater: IntelDeflater
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Inflater: IntelInflater
15:09:18.390 INFO  DummyMultiplePassVariantWalker - GCS max retries/reopens: 20
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Requester pays: disabled
15:09:18.390 INFO  DummyMultiplePassVariantWalker - Initializing engine
15:09:18.391 INFO  FeatureManager - Using codec VCFCodec to read file file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf
15:09:18.392 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
15:09:18.393 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
15:09:18.393 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
15:09:18.393 INFO  DummyMultiplePassVariantWalker - Done initializing engine
15:09:18.393 INFO  ProgressMeter - Starting traversal
15:09:18.393 INFO  ProgressMeter -        Current Locus  Elapsed Minutes    Variants Processed  Variants/Minute
15:09:18.394 INFO  DummyMultiplePassVariantWalker - Starting pass 0 through the variants
15:09:18.396 INFO  DummyMultiplePassVariantWalker - Finished pass 0 through the variants
15:09:18.396 INFO  DummyMultiplePassVariantWalker - Starting pass 1 through the variants
15:09:18.397 INFO  DummyMultiplePassVariantWalker - Finished pass 1 through the variants
15:09:18.397 INFO  DummyMultiplePassVariantWalker - No variants filtered by: AllowAllVariantsVariantFilter
15:09:18.397 INFO  DummyMultiplePassVariantWalker - 0 read(s) filtered by: AllowAllReadsReadFilter 

15:09:18.397 INFO  ProgressMeter -             unmapped              0.0                   104        1560000.0
15:09:18.397 INFO  ProgressMeter - Traversal complete. Processed 104 total variants in 0.0 minutes.
15:09:18.397 INFO  DummyMultiplePassVariantWalker - Shutting down engine
[March 4, 2026 at 3:09:18 PM GMT] org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest$DummyMultiplePassVariantWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=813694976