Class org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest

1

tests

0

failures

0

ignored

0.020s

duration

100%

successful

Tests

Test Duration Result
testGetDefaultToolVCFHeaderLines 0.020s passed

Standard error

15:09:19.473 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
15:09:19.473 INFO  TestGATKSparkToolWithVariants - The Genome Analysis Toolkit (GATK) vafter_master_merge-284-g4157897-SNAPSHOT
15:09:19.473 INFO  TestGATKSparkToolWithVariants - For support and documentation go to https://software.broadinstitute.org/gatk/
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Executing as root@265a0ba1256d on Linux v6.14.0-1017-azure amd64
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Start Date/Time: March 4, 2026 at 3:09:19 PM GMT
15:09:19.473 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
15:09:19.473 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
15:09:19.473 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.COMPRESSION_LEVEL : 2
15:09:19.473 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
15:09:19.473 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
15:09:19.473 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Deflater: IntelDeflater
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Inflater: IntelInflater
15:09:19.473 INFO  TestGATKSparkToolWithVariants - GCS max retries/reopens: 20
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Requester pays: disabled
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Initializing engine
15:09:19.473 INFO  TestGATKSparkToolWithVariants - Done initializing engine
15:09:19.474 INFO  TestGATKSparkToolWithVariants - Spark verbosity set to INFO (see --spark-verbosity argument)
15:09:19.474 INFO  TestGATKSparkToolWithVariants - Shutting down engine
[March 4, 2026 at 3:09:19 PM GMT] org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest$TestGATKSparkToolWithVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=813694976