Class org.broadinstitute.hellbender.tools.spark.sv.utils.GATKSVVCFUtilsUnitTest

all > org.broadinstitute.hellbender.tools.spark.sv.utils > GATKSVVCFUtilsUnitTest

tests

failures

ignored

0.010s

duration

100%

successful

Tests
Standard error

Tests

Test	Duration	Result
checkTestVcfFiles[0](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/spark/sv/integration/outputs/cpx_reinterpreted_simple_1_seg.vcf)	0.002s	passed
checkTestVcfFiles[1](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/spark/sv/integration/outputs/hg19_DEL.vcf)	0.001s	passed
checkTestVcfFiles[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/spark/sv/integration/outputs/cpx_reinterpreted_simple_multi_seg.vcf)	0.002s	passed
checkTestVcfFiles[3](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/spark/sv/integration/outputs/hg19_INV.vcf)	0.001s	passed
checkTestVcfFiles[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/spark/sv/utils/SVContext.vcf.gz)	0.003s	passed
testHeaderLines	0s	passed
testVCFConstants	0.001s	passed

Standard error

15:17:26.803 DEBUG GenomeLocParser - Prepared reference sequence contig dictionary
15:17:26.803 DEBUG GenomeLocParser -  1 (16000 bp)
15:17:26.803 DEBUG GenomeLocParser -  2 (16000 bp)
15:17:26.803 DEBUG GenomeLocParser -  3 (16000 bp)
15:17:26.803 DEBUG GenomeLocParser -  4 (16000 bp)