Class org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupCodecUnitTest

39

tests

0

failures

0

ignored

0.002s

duration

100%

successful

Tests

Test Duration Result
testCanDecode 0s passed
testDecodeLoc[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@1eb16e4b) 0s passed
testDecode[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@384edc3b) 0.001s passed
testParseOneBaseAndQuality[0](A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@742af13a) 0s passed
testParseOneBaseAndQuality[10](., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5fcf9bff) 0s passed
testParseOneBaseAndQuality[11](,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@70143ee4) 0s passed
testParseOneBaseAndQuality[12](^~A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5742a4bb) 0s passed
testParseOneBaseAndQuality[13](^@a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@460306ab) 0s passed
testParseOneBaseAndQuality[14](^~., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7ee0af8c) 0s passed
testParseOneBaseAndQuality[15](^@,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@386c6903) 0.001s passed
testParseOneBaseAndQuality[16](A$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4f1545bd) 0s passed
testParseOneBaseAndQuality[17](a$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@e80fc9d) 0s passed
testParseOneBaseAndQuality[18](.$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2fe19bda) 0s passed
testParseOneBaseAndQuality[19](,$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1df2b230) 0s passed
testParseOneBaseAndQuality[1](a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@566bea82) 0s passed
testParseOneBaseAndQuality[20](+11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@14443c86) 0s passed
testParseOneBaseAndQuality[21](+11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@76db7ef0) 0s passed
testParseOneBaseAndQuality[22](+11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3614cd03) 0s passed
testParseOneBaseAndQuality[23](+11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@645b31d0) 0s passed
testParseOneBaseAndQuality[24](-11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7cb13e56) 0s passed
testParseOneBaseAndQuality[25](-11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5fca8642) 0s passed
testParseOneBaseAndQuality[26](-11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2af114d2) 0s passed
testParseOneBaseAndQuality[27](-11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5426f313) 0s passed
testParseOneBaseAndQuality[28](A+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1762be43) 0s passed
testParseOneBaseAndQuality[29](a+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7286f0a) 0s passed
testParseOneBaseAndQuality[2](C, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@68284cf9) 0s passed
testParseOneBaseAndQuality[30](.+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@bfe51c3) 0s passed
testParseOneBaseAndQuality[31](,+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6e133ed) 0s passed
testParseOneBaseAndQuality[32](A-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@15dee504) 0s passed
testParseOneBaseAndQuality[33](a-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@729668d7) 0s passed
testParseOneBaseAndQuality[34](.-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@428fef32) 0s passed
testParseOneBaseAndQuality[35](,-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@44a83ca4) 0s passed
testParseOneBaseAndQuality[3](c, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6035396c) 0s passed
testParseOneBaseAndQuality[4](T, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@474998da) 0s passed
testParseOneBaseAndQuality[5](t, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@78026a45) 0s passed
testParseOneBaseAndQuality[6](G, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7c553e61) 0s passed
testParseOneBaseAndQuality[7](g, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@89eab25) 0s passed
testParseOneBaseAndQuality[8](N, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@25fc72c6) 0s passed
testParseOneBaseAndQuality[9](n, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1607b56b) 0s passed