Class org.broadinstitute.hellbender.tools.walkers.annotator.FragmentDepthPerAlleleBySampleUnitTest
Tests
| Test |
Duration |
Result |
| testDescription |
0s |
passed |
| testUsingReads[0](10, 10, 10, 10, 10, 10) |
0.008s |
passed |
| testUsingReads[1](0, 0, 0, 0, 0, 0) |
0s |
passed |
| testUsingReads[2](1, 2, 3, 4, 5, 6) |
0.001s |
passed |
| testUsingReads[3](1, 2, 3, 1, 2, 3) |
0s |
passed |
| testUsingReads[4](1, 1, 2, 3, 5, 8) |
0.001s |
passed |
| testUsingReads[5](2, 3, 5, 7, 11, 13) |
0.002s |
passed |
Standard error
15:00:13.773 DEBUG GenomeLocParser - Prepared reference sequence contig dictionary
15:00:13.773 DEBUG GenomeLocParser - 1 (16000 bp)
15:00:13.773 DEBUG GenomeLocParser - 2 (16000 bp)
15:00:13.773 DEBUG GenomeLocParser - 3 (16000 bp)
15:00:13.773 DEBUG GenomeLocParser - 4 (16000 bp)
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.779 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.783 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.783 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.783 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.784 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.784 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.784 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.785 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.785 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.786 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.786 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.786 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.786 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.
15:00:13.786 WARN Fragment - More than two reads with the same name found. Using two reads randomly to combine as a fragment.