Class org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupCodecUnitTest

39

tests

0

failures

0

ignored

0.002s

duration

100%

successful

Tests

Test Duration Result
testCanDecode 0.001s passed
testDecodeLoc[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@4cbeae45) 0s passed
testDecode[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@afcfc63) 0.001s passed
testParseOneBaseAndQuality[0](A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@44c66c7b) 0s passed
testParseOneBaseAndQuality[10](., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5c3fb4e6) 0s passed
testParseOneBaseAndQuality[11](,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2a4cf2d1) 0s passed
testParseOneBaseAndQuality[12](^~A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@48f359e4) 0s passed
testParseOneBaseAndQuality[13](^@a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4feb7abb) 0s passed
testParseOneBaseAndQuality[14](^~., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2631075f) 0s passed
testParseOneBaseAndQuality[15](^@,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@56510bb2) 0s passed
testParseOneBaseAndQuality[16](A$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@360fe828) 0s passed
testParseOneBaseAndQuality[17](a$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@37d6a6b6) 0s passed
testParseOneBaseAndQuality[18](.$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7d1f3f67) 0s passed
testParseOneBaseAndQuality[19](,$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2ea0e29d) 0s passed
testParseOneBaseAndQuality[1](a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@582679fd) 0s passed
testParseOneBaseAndQuality[20](+11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@58d103a4) 0s passed
testParseOneBaseAndQuality[21](+11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@55bcd722) 0s passed
testParseOneBaseAndQuality[22](+11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5618b26b) 0s passed
testParseOneBaseAndQuality[23](+11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@12c9803d) 0s passed
testParseOneBaseAndQuality[24](-11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@25983534) 0s passed
testParseOneBaseAndQuality[25](-11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@209db88a) 0s passed
testParseOneBaseAndQuality[26](-11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@706ff320) 0s passed
testParseOneBaseAndQuality[27](-11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1bee92f9) 0s passed
testParseOneBaseAndQuality[28](A+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@52c3f893) 0s passed
testParseOneBaseAndQuality[29](a+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3ae2721b) 0s passed
testParseOneBaseAndQuality[2](C, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1db33525) 0s passed
testParseOneBaseAndQuality[30](.+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7d2fc711) 0s passed
testParseOneBaseAndQuality[31](,+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@232fc6a6) 0s passed
testParseOneBaseAndQuality[32](A-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3d741969) 0s passed
testParseOneBaseAndQuality[33](a-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4a17b9f3) 0s passed
testParseOneBaseAndQuality[34](.-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6b5e9923) 0s passed
testParseOneBaseAndQuality[35](,-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@98e0718) 0s passed
testParseOneBaseAndQuality[3](c, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@12973dd3) 0s passed
testParseOneBaseAndQuality[4](T, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7546033d) 0s passed
testParseOneBaseAndQuality[5](t, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@d86a616) 0s passed
testParseOneBaseAndQuality[6](G, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@79a4f733) 0s passed
testParseOneBaseAndQuality[7](g, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@448ec893) 0s passed
testParseOneBaseAndQuality[8](N, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@549eeaa3) 0s passed
testParseOneBaseAndQuality[9](n, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@19a13874) 0s passed