| Test |
Duration |
Result |
| testBadAutosomalContigs |
2.948s |
passed |
| testDifferentInvalidInput[0](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
2.909s |
passed |
| testDifferentInvalidInput[10](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.812s |
passed |
| testDifferentInvalidInput[11](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.858s |
passed |
| testDifferentInvalidInput[1](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
2.806s |
passed |
| testDifferentInvalidInput[2](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
2.845s |
passed |
| testDifferentInvalidInput[3](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.809s |
passed |
| testDifferentInvalidInput[4](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.776s |
passed |
| testDifferentInvalidInput[5](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.775s |
passed |
| testDifferentInvalidInput[6](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.828s |
passed |
| testDifferentInvalidInput[7](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.831s |
passed |
| testDifferentInvalidInput[8](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.826s |
passed |
| testDifferentInvalidInput[9](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
2.771s |
passed |
| testDifferentValidInput[0](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
19.459s |
passed |
| testDifferentValidInput[1](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.327s |
passed |
| testDifferentValidInput[2](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.384s |
passed |
| testDifferentValidInput[3](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
8.389s |
passed |
| testDifferentValidInput[4](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
8.445s |
passed |
| testDifferentValidInput[5](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model]) |
8.481s |
passed |
| testDifferentValidInput[6](0, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.357s |
passed |
| testDifferentValidInput[7](1, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.389s |
passed |
| testDifferentValidInput[8](2, [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-calls, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-calls], [/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_1-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_0-model, /gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/copynumber/gcnv-postprocess/shard_2-model]) |
8.320s |
passed |
| testQualScoreCalculationWithBreakpoints |
25.329s |
passed |