Mouse embryo time series, nuclei (BBBC050 Emb01, 11 time points, 18 MB)

Early mouse embryo with fluorescent histone-labelled nuclei (H2B-mRFP1), 3D confocal stacks: every 50th time point of training embryo Emb01 (Emb01_t001 to Emb01_t501, one stack per file, files unchanged). Voxels 0.8 x 0.8 x 1.75 um, 10 minutes between the original time points (the files carry no calibration; type it or use the movie). File > Open on any file opens all 11 as a time series.

Attribution: Image set BBBC050 (Tokuoka Y, Yamada TG, Mashiko D, Ikeda Z, Hiroi NF, Kobayashi TJ, Yamagata K, Funahashi A (2020) 3D convolutional neural networks-based segmentation to acquire quantitative criteria of the nucleus during mouse embryogenesis, npj Syst Biol Appl 6:32), Broad Bioimage Benchmark Collection (Ljosa V, Sokolnicki KL, Carpenter AE (2012) Nature Methods 9:637). Licence: CC BY 3.0. Eleven files of Emb01 redistributed unchanged.
Licence: CC BY 3.0 (https://creativecommons.org/licenses/by/3.0/; commercial use allowed)
Licence URL: https://creativecommons.org/licenses/by/3.0/
Original source: https://bbbc.broadinstitute.org/BBBC050

Redistributed unchanged (or as described above) by Maddisys Limited as demo data for FiRender and FiAlign.
Please credit the original authors as shown when you publish results made with this dataset.
