/src/gdal/frmts/netcdf/netcdflayersg.cpp
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1 | | /****************************************************************************** |
2 | | * |
3 | | * Project: netCDF read/write Driver |
4 | | * Purpose: GDAL bindings over netCDF library. |
5 | | * Author: Winor Chen <wchen329 at wisc.edu> |
6 | | * |
7 | | ****************************************************************************** |
8 | | * Copyright (c) 2019, Winor Chen <wchen329 at wisc.edu> |
9 | | * |
10 | | * SPDX-License-Identifier: MIT |
11 | | ****************************************************************************/ |
12 | | #include "netcdfsg.h" |
13 | | #include "netcdfdataset.h" |
14 | | #include "ogr_core.h" |
15 | | |
16 | | namespace nccfdriver |
17 | | { |
18 | | OGRwkbGeometryType RawToOGR(geom_t type, int axis_count) |
19 | 0 | { |
20 | 0 | OGRwkbGeometryType ret = wkbNone; |
21 | |
|
22 | 0 | switch (type) |
23 | 0 | { |
24 | 0 | case NONE: |
25 | 0 | break; |
26 | 0 | case LINE: |
27 | 0 | ret = axis_count == 2 ? wkbLineString |
28 | 0 | : axis_count == 3 ? wkbLineString25D |
29 | 0 | : wkbNone; |
30 | 0 | break; |
31 | 0 | case MULTILINE: |
32 | 0 | ret = axis_count == 2 ? wkbMultiLineString |
33 | 0 | : axis_count == 3 ? wkbMultiLineString25D |
34 | 0 | : wkbNone; |
35 | 0 | break; |
36 | 0 | case POLYGON: |
37 | 0 | ret = axis_count == 2 ? wkbPolygon |
38 | 0 | : axis_count == 3 ? wkbPolygon25D |
39 | 0 | : wkbNone; |
40 | 0 | break; |
41 | 0 | case MULTIPOLYGON: |
42 | 0 | ret = axis_count == 2 ? wkbMultiPolygon |
43 | 0 | : axis_count == 3 ? wkbMultiPolygon25D |
44 | 0 | : wkbNone; |
45 | 0 | break; |
46 | 0 | case POINT: |
47 | 0 | ret = axis_count == 2 ? wkbPoint |
48 | 0 | : axis_count == 3 ? wkbPoint25D |
49 | 0 | : wkbNone; |
50 | 0 | break; |
51 | 0 | case MULTIPOINT: |
52 | 0 | ret = axis_count == 2 ? wkbMultiPoint |
53 | 0 | : axis_count == 3 ? wkbMultiPoint25D |
54 | 0 | : wkbNone; |
55 | 0 | break; |
56 | 0 | case UNSUPPORTED: |
57 | 0 | break; |
58 | 0 | } |
59 | | |
60 | 0 | return ret; |
61 | 0 | } |
62 | | |
63 | | geom_t OGRtoRaw(OGRwkbGeometryType type) |
64 | 2.94k | { |
65 | 2.94k | geom_t ret = NONE; |
66 | 2.94k | auto eFlatType = wkbFlatten(type); |
67 | | |
68 | 2.94k | if (eFlatType == wkbPoint) |
69 | 0 | { |
70 | 0 | ret = POINT; |
71 | 0 | } |
72 | | |
73 | 2.94k | else if (eFlatType == wkbLineString) |
74 | 0 | { |
75 | 0 | ret = LINE; |
76 | 0 | } |
77 | | |
78 | 2.94k | else if (eFlatType == wkbPolygon) |
79 | 0 | { |
80 | 0 | ret = POLYGON; |
81 | 0 | } |
82 | | |
83 | 2.94k | else if (eFlatType == wkbMultiPoint) |
84 | 0 | { |
85 | 0 | ret = MULTIPOINT; |
86 | 0 | } |
87 | | |
88 | 2.94k | else if (eFlatType == wkbMultiLineString) |
89 | 0 | { |
90 | 0 | ret = MULTILINE; |
91 | 0 | } |
92 | | |
93 | 2.94k | else if (eFlatType == wkbMultiPolygon) |
94 | 0 | { |
95 | 0 | ret = MULTIPOLYGON; |
96 | 0 | } |
97 | | |
98 | | // if the feature type isn't NONE potentially give a warning about measures |
99 | 2.94k | if (ret != NONE && wkbHasM(type)) |
100 | 0 | { |
101 | 0 | CPLError(CE_Warning, CPLE_NotSupported, |
102 | 0 | "A partially supported measured feature type was detected. X, " |
103 | 0 | "Y, Z Geometry will be preserved but the measure axis and " |
104 | 0 | "related information will be removed."); |
105 | 0 | } |
106 | | |
107 | 2.94k | return ret; |
108 | 2.94k | } |
109 | | |
110 | | bool OGRHasZandSupported(OGRwkbGeometryType type) |
111 | 0 | { |
112 | 0 | return type == wkbPoint25D || type == wkbLineString25D || |
113 | 0 | type == wkbPolygon25D || type == wkbMultiPoint25D || |
114 | 0 | type == wkbMultiLineString25D || type == wkbMultiPolygon25D; |
115 | 0 | } |
116 | | |
117 | | } // namespace nccfdriver |
118 | | |
119 | | bool netCDFDataset::DetectAndFillSGLayers(int ncid) |
120 | 35 | { |
121 | | // Discover simple geometry variables |
122 | 35 | int var_count; |
123 | 35 | nc_inq_nvars(ncid, &var_count); |
124 | 35 | std::set<int> vidList; |
125 | | |
126 | 35 | nccfdriver::scanForGeometryContainers(ncid, vidList); |
127 | | |
128 | 35 | if (!vidList.empty()) |
129 | 0 | { |
130 | 0 | for (auto vid : vidList) |
131 | 0 | { |
132 | 0 | try |
133 | 0 | { |
134 | 0 | LoadSGVarIntoLayer(ncid, vid); |
135 | 0 | } |
136 | |
|
137 | 0 | catch (nccfdriver::SG_Exception &e) |
138 | 0 | { |
139 | 0 | CPLError(CE_Warning, CPLE_AppDefined, |
140 | 0 | "Translation of a simple geometry layer has been " |
141 | 0 | "terminated prematurely due to an error.\n%s", |
142 | 0 | e.get_err_msg()); |
143 | 0 | } |
144 | 0 | } |
145 | 0 | } |
146 | | |
147 | 35 | return !vidList.empty(); |
148 | 35 | } |
149 | | |
150 | | CPLErr netCDFDataset::LoadSGVarIntoLayer(int ncid, int nc_basevarId) |
151 | 0 | { |
152 | 0 | std::shared_ptr<nccfdriver::SGeometry_Reader> sg( |
153 | 0 | new nccfdriver::SGeometry_Reader(ncid, nc_basevarId)); |
154 | 0 | int cont_id = sg->getContainerId(); |
155 | 0 | nccfdriver::SGeometry_PropertyScanner pr(ncid, cont_id); |
156 | 0 | OGRwkbGeometryType owgt = |
157 | 0 | nccfdriver::RawToOGR(sg->getGeometryType(), sg->get_axisCount()); |
158 | |
|
159 | 0 | std::string return_gm = ""; |
160 | |
|
161 | 0 | if (sg->getGridMappingVarID() != nccfdriver::INVALID_VAR_ID) |
162 | 0 | SetProjectionFromVar(ncid, nc_basevarId, true, |
163 | 0 | sg->getGridMappingName().c_str(), &return_gm, |
164 | 0 | sg.get(), /*paosRemovedMDItems=*/nullptr); |
165 | | |
166 | | // Geometry Type invalid, avoid further processing |
167 | 0 | if (owgt == wkbNone) |
168 | 0 | { |
169 | 0 | throw nccfdriver::SG_Exception_BadFeature(); |
170 | 0 | } |
171 | | |
172 | 0 | char baseName[NC_MAX_CHAR + 1]; |
173 | 0 | memset(baseName, 0, NC_MAX_CHAR + 1); |
174 | 0 | nc_inq_varname(ncid, nc_basevarId, baseName); |
175 | |
|
176 | 0 | OGRSpatialReference *poSRS = nullptr; |
177 | 0 | if (return_gm != "") |
178 | 0 | { |
179 | 0 | poSRS = new OGRSpatialReference(); |
180 | 0 | if (poSRS->importFromWkt(return_gm.c_str()) != OGRERR_NONE) |
181 | 0 | { |
182 | 0 | delete poSRS; |
183 | 0 | throw nccfdriver::SG_Exception_General_Malformed("SRS settings"); |
184 | 0 | } |
185 | | |
186 | 0 | poSRS->SetAxisMappingStrategy(OAMS_TRADITIONAL_GIS_ORDER); |
187 | 0 | } |
188 | | |
189 | 0 | std::shared_ptr<netCDFLayer> poL( |
190 | 0 | new netCDFLayer(this, ncid, baseName, owgt, poSRS)); |
191 | |
|
192 | 0 | if (poSRS != nullptr) |
193 | 0 | { |
194 | 0 | poSRS->Release(); |
195 | 0 | } |
196 | |
|
197 | 0 | poL->EnableSGBypass(); |
198 | 0 | OGRFeatureDefn *defn = poL->GetLayerDefn(); |
199 | 0 | defn->SetGeomType(owgt); |
200 | | |
201 | | // Add properties |
202 | 0 | std::vector<int> props = pr.ids(); |
203 | 0 | for (size_t itr = 0; itr < props.size(); itr++) |
204 | 0 | { |
205 | 0 | poL->AddField(props[itr]); |
206 | 0 | } |
207 | | |
208 | | // Set simple geometry object |
209 | 0 | poL->SetSGeometryRepresentation(sg); |
210 | | |
211 | | // Create layer |
212 | 0 | papoLayers.push_back(poL); |
213 | |
|
214 | 0 | return CE_None; |
215 | 0 | } |
216 | | |
217 | | /* Creates and fills any needed variables that haven't already been created |
218 | | */ |
219 | | bool netCDFDataset::SGCommitPendingTransaction() |
220 | 0 | { |
221 | 0 | try |
222 | 0 | { |
223 | 0 | if (bSGSupport) |
224 | 0 | { |
225 | | // Go through all the layers and resize dimensions accordingly |
226 | 0 | for (size_t layerInd = 0; layerInd < papoLayers.size(); layerInd++) |
227 | 0 | { |
228 | 0 | auto poLayer = |
229 | 0 | dynamic_cast<netCDFLayer *>(papoLayers[layerInd].get()); |
230 | 0 | if (!poLayer) |
231 | 0 | continue; |
232 | 0 | nccfdriver::ncLayer_SG_Metadata &layerMD = |
233 | 0 | poLayer->getLayerSGMetadata(); |
234 | 0 | nccfdriver::geom_t wType = layerMD.getWritableType(); |
235 | | |
236 | | // Resize node coordinates |
237 | 0 | int ncoord_did = layerMD.get_node_coord_dimID(); |
238 | 0 | if (ncoord_did != nccfdriver::INVALID_DIM_ID) |
239 | 0 | { |
240 | 0 | vcdf.nc_resize_vdim( |
241 | 0 | ncoord_did, layerMD.get_next_write_pos_node_coord()); |
242 | 0 | } |
243 | | |
244 | | // Resize node count (for all except POINT) |
245 | 0 | if (wType != nccfdriver::POINT) |
246 | 0 | { |
247 | 0 | int ncount_did = layerMD.get_node_count_dimID(); |
248 | 0 | if (ncount_did != nccfdriver::INVALID_DIM_ID) |
249 | 0 | { |
250 | 0 | vcdf.nc_resize_vdim( |
251 | 0 | ncount_did, |
252 | 0 | layerMD.get_next_write_pos_node_count()); |
253 | 0 | } |
254 | 0 | } |
255 | | |
256 | | // Resize part node count (for MULTILINE, POLYGON, MULTIPOLYGON) |
257 | 0 | if (wType == nccfdriver::MULTILINE || |
258 | 0 | wType == nccfdriver::POLYGON || |
259 | 0 | wType == nccfdriver::MULTIPOLYGON) |
260 | 0 | { |
261 | 0 | int pnc_did = layerMD.get_pnc_dimID(); |
262 | 0 | if (pnc_did != nccfdriver::INVALID_DIM_ID) |
263 | 0 | { |
264 | 0 | vcdf.nc_resize_vdim(pnc_did, |
265 | 0 | layerMD.get_next_write_pos_pnc()); |
266 | 0 | } |
267 | 0 | } |
268 | |
|
269 | 0 | nccfdriver::geom_t geometry_type = layerMD.getWritableType(); |
270 | | |
271 | | /* Delete interior ring stuff if not detected |
272 | | */ |
273 | |
|
274 | 0 | if (!layerMD.getInteriorRingDetected() && |
275 | 0 | (geometry_type == nccfdriver::MULTIPOLYGON || |
276 | 0 | geometry_type == nccfdriver::POLYGON) && |
277 | 0 | layerMD.get_containerRealID() != nccfdriver::INVALID_VAR_ID) |
278 | 0 | { |
279 | 0 | SetDefineMode(true); |
280 | |
|
281 | 0 | int err_code = |
282 | 0 | nc_del_att(cdfid, layerMD.get_containerRealID(), |
283 | 0 | CF_SG_INTERIOR_RING); |
284 | 0 | NCDF_ERR(err_code); |
285 | 0 | if (err_code != NC_NOERR) |
286 | 0 | { |
287 | 0 | std::string frmt = std::string("attribute: ") + |
288 | 0 | std::string(CF_SG_INTERIOR_RING); |
289 | 0 | throw nccfdriver::SGWriter_Exception_NCDelFailure( |
290 | 0 | layerMD.get_containerName().c_str(), frmt.c_str()); |
291 | 0 | } |
292 | | |
293 | | // Invalidate variable writes as well - Interior Ring |
294 | 0 | vcdf.nc_del_vvar(layerMD.get_intring_varID()); |
295 | |
|
296 | 0 | if (geometry_type == nccfdriver::POLYGON) |
297 | 0 | { |
298 | 0 | err_code = |
299 | 0 | nc_del_att(cdfid, layerMD.get_containerRealID(), |
300 | 0 | CF_SG_PART_NODE_COUNT); |
301 | 0 | NCDF_ERR(err_code); |
302 | 0 | if (err_code != NC_NOERR) |
303 | 0 | { |
304 | 0 | std::string frmt = |
305 | 0 | std::string("attribute: ") + |
306 | 0 | std::string(CF_SG_PART_NODE_COUNT); |
307 | 0 | throw nccfdriver::SGWriter_Exception_NCDelFailure( |
308 | 0 | layerMD.get_containerName().c_str(), |
309 | 0 | frmt.c_str()); |
310 | 0 | } |
311 | | |
312 | | // Invalidate variable writes as well - Part Node Count |
313 | 0 | vcdf.nc_del_vvar(layerMD.get_pnc_varID()); |
314 | | |
315 | | // Invalidate dimension as well - Part Node Count |
316 | 0 | vcdf.nc_del_vdim(layerMD.get_pnc_dimID()); |
317 | 0 | } |
318 | | |
319 | 0 | SetDefineMode(false); |
320 | 0 | } |
321 | 0 | } |
322 | | |
323 | 0 | vcdf.nc_vmap(); |
324 | 0 | this->FieldScribe.commit_transaction(); |
325 | 0 | this->GeometryScribe.commit_transaction(); |
326 | 0 | } |
327 | 0 | } |
328 | |
|
329 | 0 | catch (nccfdriver::SG_Exception &sge) |
330 | 0 | { |
331 | 0 | CPLError(CE_Fatal, CPLE_FileIO, |
332 | 0 | "An error occurred while writing the target netCDF File. " |
333 | 0 | "Translation will be terminated.\n%s", |
334 | 0 | sge.get_err_msg()); |
335 | 0 | return false; |
336 | 0 | } |
337 | 0 | return true; |
338 | 0 | } |
339 | | |
340 | | void netCDFDataset::SGLogPendingTransaction() |
341 | 0 | { |
342 | 0 | GeometryScribe.log_transaction(); |
343 | 0 | FieldScribe.log_transaction(); |
344 | 0 | } |
345 | | |
346 | | /* Takes an index and using the layer geometry builds the equivalent |
347 | | * OGRFeature. |
348 | | */ |
349 | | OGRFeature *netCDFLayer::buildSGeometryFeature(size_t featureInd) |
350 | 0 | { |
351 | 0 | OGRGeometry *geometry; |
352 | |
|
353 | 0 | switch (m_simpleGeometryReader->getGeometryType()) |
354 | 0 | { |
355 | 0 | case nccfdriver::POINT: |
356 | 0 | geometry = new OGRPoint; |
357 | 0 | break; |
358 | 0 | case nccfdriver::LINE: |
359 | 0 | geometry = new OGRLineString; |
360 | 0 | break; |
361 | 0 | case nccfdriver::POLYGON: |
362 | 0 | geometry = new OGRPolygon; |
363 | 0 | break; |
364 | 0 | case nccfdriver::MULTIPOINT: |
365 | 0 | geometry = new OGRMultiPoint; |
366 | 0 | break; |
367 | 0 | case nccfdriver::MULTILINE: |
368 | 0 | geometry = new OGRMultiLineString; |
369 | 0 | break; |
370 | 0 | case nccfdriver::MULTIPOLYGON: |
371 | 0 | geometry = new OGRMultiPolygon; |
372 | 0 | break; |
373 | 0 | default: |
374 | 0 | throw nccfdriver::SG_Exception_BadFeature(); |
375 | 0 | break; |
376 | 0 | } |
377 | | |
378 | 0 | const auto wkb = m_simpleGeometryReader->serializeToWKB(featureInd); |
379 | 0 | geometry->importFromWkb(wkb.data(), wkb.size(), wkbVariantIso); |
380 | 0 | geometry->assignSpatialReference(this->GetSpatialRef()); |
381 | |
|
382 | 0 | OGRFeatureDefn *defn = this->GetLayerDefn(); |
383 | 0 | OGRFeature *feat = new OGRFeature(defn); |
384 | 0 | feat->SetGeometryDirectly(geometry); |
385 | |
|
386 | 0 | int dimId = m_simpleGeometryReader->getInstDim(); |
387 | |
|
388 | 0 | this->FillFeatureFromVar(feat, dimId, featureInd); |
389 | |
|
390 | 0 | feat->SetFID(featureInd); |
391 | 0 | return feat; |
392 | 0 | } |
393 | | |
394 | | std::string netCDFDataset::generateLogName() |
395 | 46.7k | { |
396 | 46.7k | return std::string(CPLGenerateTempFilenameSafe(nullptr)); |
397 | 46.7k | } |