Coverage Report

Created: 2026-03-16 06:30

next uncovered line (L), next uncovered region (R), next uncovered branch (B)
/src/hdf5/src/H5EAsblock.c
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Source
1
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
2
 * Copyright by The HDF Group.                                               *
3
 * All rights reserved.                                                      *
4
 *                                                                           *
5
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
6
 * terms governing use, modification, and redistribution, is contained in    *
7
 * the LICENSE file, which can be found at the root of the source code       *
8
 * distribution tree, or in https://www.hdfgroup.org/licenses.               *
9
 * If you do not have access to either file, you may request a copy from     *
10
 * help@hdfgroup.org.                                                        *
11
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
12
13
/*-------------------------------------------------------------------------
14
 *
15
 * Created:   H5EAsblock.c
16
 *
17
 * Purpose:   Super block routines for extensible arrays.
18
 *
19
 *-------------------------------------------------------------------------
20
 */
21
22
/**********************/
23
/* Module Declaration */
24
/**********************/
25
26
#include "H5EAmodule.h" /* This source code file is part of the H5EA module */
27
28
/***********************/
29
/* Other Packages Used */
30
/***********************/
31
32
/***********/
33
/* Headers */
34
/***********/
35
#include "H5private.h"   /* Generic Functions     */
36
#include "H5Eprivate.h"  /* Error handling        */
37
#include "H5EApkg.h"     /* Extensible Arrays     */
38
#include "H5FLprivate.h" /* Free Lists                           */
39
#include "H5MFprivate.h" /* File memory management    */
40
#include "H5VMprivate.h" /* Vectors and arrays      */
41
42
/****************/
43
/* Local Macros */
44
/****************/
45
46
/******************/
47
/* Local Typedefs */
48
/******************/
49
50
/********************/
51
/* Package Typedefs */
52
/********************/
53
54
/********************/
55
/* Local Prototypes */
56
/********************/
57
58
/*********************/
59
/* Package Variables */
60
/*********************/
61
62
/*****************************/
63
/* Library Private Variables */
64
/*****************************/
65
66
/*******************/
67
/* Local Variables */
68
/*******************/
69
70
/* Declare a free list to manage the H5EA_iblock_t struct */
71
H5FL_DEFINE_STATIC(H5EA_sblock_t);
72
73
/* Declare a free list to manage the haddr_t sequence information */
74
H5FL_SEQ_DEFINE_STATIC(haddr_t);
75
76
/* Declare a free list to manage blocks of 'page init' bitmasks */
77
H5FL_BLK_DEFINE(page_init);
78
79
/*-------------------------------------------------------------------------
80
 * Function:  H5EA__sblock_alloc
81
 *
82
 * Purpose: Allocate extensible array super block
83
 *
84
 * Return:  Non-NULL pointer to super block on success/NULL on failure
85
 *
86
 *-------------------------------------------------------------------------
87
 */
88
H5EA_sblock_t *
89
H5EA__sblock_alloc(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, unsigned sblk_idx)
90
0
{
91
0
    H5EA_sblock_t *sblock    = NULL; /* Extensible array super block */
92
0
    H5EA_sblock_t *ret_value = NULL;
93
94
0
    FUNC_ENTER_PACKAGE
95
96
    /* Check arguments */
97
0
    assert(hdr);
98
99
    /* Allocate memory for the index block */
100
0
    if (NULL == (sblock = H5FL_CALLOC(H5EA_sblock_t)))
101
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, NULL,
102
0
                    "memory allocation failed for extensible array super block");
103
104
    /* Share common array information */
105
0
    if (H5EA__hdr_incr(hdr) < 0)
106
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTINC, NULL, "can't increment reference count on shared array header");
107
0
    sblock->hdr = hdr;
108
109
    /* Set non-zero internal fields */
110
0
    sblock->parent = parent;
111
0
    sblock->addr   = HADDR_UNDEF;
112
113
    /* Compute/cache information */
114
0
    sblock->idx    = sblk_idx;
115
0
    sblock->ndblks = hdr->sblk_info[sblk_idx].ndblks;
116
0
    assert(sblock->ndblks);
117
0
    sblock->dblk_nelmts = hdr->sblk_info[sblk_idx].dblk_nelmts;
118
119
    /* Allocate buffer for data block addresses in super block */
120
0
    if (NULL == (sblock->dblk_addrs = H5FL_SEQ_MALLOC(haddr_t, sblock->ndblks)))
121
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, NULL,
122
0
                    "memory allocation failed for super block data block addresses");
123
124
    /* Check if # of elements in data blocks requires paging */
125
0
    if (sblock->dblk_nelmts > hdr->dblk_page_nelmts) {
126
        /* Compute # of pages in each data block from this super block */
127
0
        sblock->dblk_npages = sblock->dblk_nelmts / hdr->dblk_page_nelmts;
128
129
        /* Sanity check that we have at least 2 pages in data block */
130
0
        assert(sblock->dblk_npages > 1);
131
132
        /* Sanity check for integer truncation */
133
0
        assert((sblock->dblk_npages * hdr->dblk_page_nelmts) == sblock->dblk_nelmts);
134
135
        /* Compute size of buffer for each data block's 'page init' bitmask */
136
0
        sblock->dblk_page_init_size = ((sblock->dblk_npages) + 7) / 8;
137
0
        assert(sblock->dblk_page_init_size > 0);
138
139
        /* Allocate buffer for all 'page init' bitmasks in super block */
140
0
        if (NULL ==
141
0
            (sblock->page_init = H5FL_BLK_CALLOC(page_init, sblock->ndblks * sblock->dblk_page_init_size)))
142
0
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, NULL,
143
0
                        "memory allocation failed for super block page init bitmask");
144
145
        /* Compute data block page size */
146
0
        sblock->dblk_page_size = (hdr->dblk_page_nelmts * hdr->cparam.raw_elmt_size) + H5EA_SIZEOF_CHKSUM;
147
0
    } /* end if */
148
149
    /* Set the return value */
150
0
    ret_value = sblock;
151
152
0
done:
153
0
    if (!ret_value)
154
0
        if (sblock && H5EA__sblock_dest(sblock) < 0)
155
0
            HDONE_ERROR(H5E_EARRAY, H5E_CANTFREE, NULL, "unable to destroy extensible array super block");
156
157
0
    FUNC_LEAVE_NOAPI(ret_value)
158
0
} /* end H5EA__sblock_alloc() */
159
160
/*-------------------------------------------------------------------------
161
 * Function:  H5EA__sblock_create
162
 *
163
 * Purpose: Creates a new extensible array super block in the file
164
 *
165
 * Return:  Valid file address on success/HADDR_UNDEF on failure
166
 *
167
 *-------------------------------------------------------------------------
168
 */
169
haddr_t
170
H5EA__sblock_create(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, bool *stats_changed, unsigned sblk_idx)
171
0
{
172
0
    H5EA_sblock_t *sblock = NULL;           /* Extensible array super block */
173
0
    haddr_t        sblock_addr;             /* Extensible array super block address */
174
0
    haddr_t        tmp_addr  = HADDR_UNDEF; /* Address value to fill data block addresses with */
175
0
    bool           inserted  = false;       /* Whether the header was inserted into cache */
176
0
    haddr_t        ret_value = HADDR_UNDEF;
177
178
0
    FUNC_ENTER_PACKAGE
179
180
    /* Sanity check */
181
0
    assert(hdr);
182
0
    assert(stats_changed);
183
184
    /* Allocate the super block */
185
0
    if (NULL == (sblock = H5EA__sblock_alloc(hdr, parent, sblk_idx)))
186
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, HADDR_UNDEF,
187
0
                    "memory allocation failed for extensible array super block");
188
189
    /* Set size of super block on disk */
190
0
    sblock->size = H5EA_SBLOCK_SIZE(sblock);
191
192
    /* Set offset of block in array's address space */
193
0
    sblock->block_off = hdr->sblk_info[sblk_idx].start_idx;
194
195
    /* Allocate space for the super block on disk */
196
0
    if (HADDR_UNDEF == (sblock_addr = H5MF_alloc(hdr->f, H5FD_MEM_EARRAY_SBLOCK, (hsize_t)sblock->size)))
197
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, HADDR_UNDEF,
198
0
                    "file allocation failed for extensible array super block");
199
0
    sblock->addr = sblock_addr;
200
201
    /* Reset data block addresses to "undefined" address value */
202
0
    H5VM_array_fill(sblock->dblk_addrs, &tmp_addr, sizeof(haddr_t), sblock->ndblks);
203
204
    /* Cache the new extensible array super block */
205
0
    if (H5AC_insert_entry(hdr->f, H5AC_EARRAY_SBLOCK, sblock_addr, sblock, H5AC__NO_FLAGS_SET) < 0)
206
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTINSERT, HADDR_UNDEF,
207
0
                    "can't add extensible array super block to cache");
208
0
    inserted = true;
209
210
    /* Add super block as child of 'top' proxy */
211
0
    if (hdr->top_proxy) {
212
0
        if (H5AC_proxy_entry_add_child(hdr->top_proxy, hdr->f, sblock) < 0)
213
0
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTSET, HADDR_UNDEF,
214
0
                        "unable to add extensible array entry as child of array proxy");
215
0
        sblock->top_proxy = hdr->top_proxy;
216
0
    } /* end if */
217
218
    /* Update extensible array super block statistics */
219
0
    hdr->stats.stored.nsuper_blks++;
220
0
    hdr->stats.stored.super_blk_size += sblock->size;
221
222
    /* Mark the statistics as changed */
223
0
    *stats_changed = true;
224
225
    /* Set address of super block to return */
226
0
    ret_value = sblock_addr;
227
228
0
done:
229
0
    if (!H5_addr_defined(ret_value))
230
0
        if (sblock) {
231
            /* Remove from cache, if inserted */
232
0
            if (inserted)
233
0
                if (H5AC_remove_entry(sblock) < 0)
234
0
                    HDONE_ERROR(H5E_EARRAY, H5E_CANTREMOVE, HADDR_UNDEF,
235
0
                                "unable to remove extensible array super block from cache");
236
237
            /* Release super block's disk space */
238
0
            if (H5_addr_defined(sblock->addr) &&
239
0
                H5MF_xfree(hdr->f, H5FD_MEM_EARRAY_SBLOCK, sblock->addr, (hsize_t)sblock->size) < 0)
240
0
                HDONE_ERROR(H5E_EARRAY, H5E_CANTFREE, HADDR_UNDEF,
241
0
                            "unable to release extensible array super block");
242
243
            /* Destroy super block */
244
0
            if (H5EA__sblock_dest(sblock) < 0)
245
0
                HDONE_ERROR(H5E_EARRAY, H5E_CANTFREE, HADDR_UNDEF,
246
0
                            "unable to destroy extensible array super block");
247
0
        } /* end if */
248
249
0
    FUNC_LEAVE_NOAPI(ret_value)
250
0
} /* end H5EA__sblock_create() */
251
252
/*-------------------------------------------------------------------------
253
 * Function:  H5EA__sblock_protect
254
 *
255
 * Purpose: Convenience wrapper around protecting extensible array super block
256
 *
257
 * Return:  Non-NULL pointer to data block on success/NULL on failure
258
 *
259
 *-------------------------------------------------------------------------
260
 */
261
H5EA_sblock_t *
262
H5EA__sblock_protect(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, haddr_t sblk_addr, unsigned sblk_idx,
263
                     unsigned flags)
264
0
{
265
0
    H5EA_sblock_t         *sblock = NULL; /* Pointer to super block */
266
0
    H5EA_sblock_cache_ud_t udata;         /* Information needed for loading super block */
267
0
    H5EA_sblock_t         *ret_value = NULL;
268
269
0
    FUNC_ENTER_PACKAGE
270
271
    /* Sanity check */
272
0
    assert(hdr);
273
0
    assert(H5_addr_defined(sblk_addr));
274
275
    /* only the H5AC__READ_ONLY_FLAG may be set */
276
0
    assert((flags & (unsigned)(~H5AC__READ_ONLY_FLAG)) == 0);
277
278
    /* Set up user data */
279
0
    udata.hdr       = hdr;
280
0
    udata.parent    = parent;
281
0
    udata.sblk_idx  = sblk_idx;
282
0
    udata.sblk_addr = sblk_addr;
283
284
    /* Protect the super block */
285
0
    if (NULL ==
286
0
        (sblock = (H5EA_sblock_t *)H5AC_protect(hdr->f, H5AC_EARRAY_SBLOCK, sblk_addr, &udata, flags)))
287
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTPROTECT, NULL,
288
0
                    "unable to protect extensible array super block, address = %llu",
289
0
                    (unsigned long long)sblk_addr);
290
291
    /* Create top proxy, if it doesn't exist */
292
0
    if (hdr->top_proxy && NULL == sblock->top_proxy) {
293
        /* Add super block as child of 'top' proxy */
294
0
        if (H5AC_proxy_entry_add_child(hdr->top_proxy, hdr->f, sblock) < 0)
295
0
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTSET, NULL,
296
0
                        "unable to add extensible array entry as child of array proxy");
297
0
        sblock->top_proxy = hdr->top_proxy;
298
0
    }
299
300
    /* Set return value */
301
0
    ret_value = sblock;
302
303
0
done:
304
    /* Clean up on error */
305
0
    if (!ret_value) {
306
        /* Release the super block, if it was protected */
307
0
        if (sblock &&
308
0
            H5AC_unprotect(hdr->f, H5AC_EARRAY_SBLOCK, sblock->addr, sblock, H5AC__NO_FLAGS_SET) < 0)
309
0
            HDONE_ERROR(H5E_EARRAY, H5E_CANTUNPROTECT, NULL,
310
0
                        "unable to unprotect extensible array super block, address = %llu",
311
0
                        (unsigned long long)sblock->addr);
312
0
    }
313
314
0
    FUNC_LEAVE_NOAPI(ret_value)
315
0
} /* end H5EA__sblock_protect() */
316
317
/*-------------------------------------------------------------------------
318
 * Function:  H5EA__sblock_unprotect
319
 *
320
 * Purpose: Convenience wrapper around unprotecting extensible array super block
321
 *
322
 * Return:  Non-negative on success/Negative on failure
323
 *
324
 *-------------------------------------------------------------------------
325
 */
326
herr_t
327
H5EA__sblock_unprotect(H5EA_sblock_t *sblock, unsigned cache_flags)
328
0
{
329
0
    herr_t ret_value = SUCCEED;
330
331
0
    FUNC_ENTER_PACKAGE
332
333
    /* Sanity check */
334
0
    assert(sblock);
335
336
    /* Unprotect the super block */
337
0
    if (H5AC_unprotect(sblock->hdr->f, H5AC_EARRAY_SBLOCK, sblock->addr, sblock, cache_flags) < 0)
338
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTUNPROTECT, FAIL,
339
0
                    "unable to unprotect extensible array super block, address = %llu",
340
0
                    (unsigned long long)sblock->addr);
341
342
0
done:
343
0
    FUNC_LEAVE_NOAPI(ret_value)
344
0
} /* end H5EA__sblock_unprotect() */
345
346
/*-------------------------------------------------------------------------
347
 * Function:  H5EA__sblock_delete
348
 *
349
 * Purpose: Delete a super block
350
 *
351
 * Return:  SUCCEED/FAIL
352
 *
353
 *-------------------------------------------------------------------------
354
 */
355
herr_t
356
H5EA__sblock_delete(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, haddr_t sblk_addr, unsigned sblk_idx)
357
0
{
358
0
    H5EA_sblock_t *sblock = NULL; /* Pointer to super block */
359
0
    size_t         u;             /* Local index variable */
360
0
    herr_t         ret_value = SUCCEED;
361
362
0
    FUNC_ENTER_PACKAGE
363
364
    /* Sanity check */
365
0
    assert(hdr);
366
0
    assert(H5_addr_defined(sblk_addr));
367
368
    /* Protect super block */
369
0
    if (NULL == (sblock = H5EA__sblock_protect(hdr, parent, sblk_addr, sblk_idx, H5AC__NO_FLAGS_SET)))
370
0
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTPROTECT, FAIL,
371
0
                    "unable to protect extensible array super block, address = %llu",
372
0
                    (unsigned long long)sblk_addr);
373
374
    /* Iterate over data blocks */
375
0
    for (u = 0; u < sblock->ndblks; u++) {
376
        /* Check for data block existing */
377
0
        if (H5_addr_defined(sblock->dblk_addrs[u])) {
378
            /* Delete data block */
379
0
            if (H5EA__dblock_delete(hdr, sblock, sblock->dblk_addrs[u], sblock->dblk_nelmts) < 0)
380
0
                HGOTO_ERROR(H5E_EARRAY, H5E_CANTDELETE, FAIL, "unable to delete extensible array data block");
381
0
            sblock->dblk_addrs[u] = HADDR_UNDEF;
382
0
        } /* end if */
383
0
    }     /* end for */
384
385
0
done:
386
    /* Finished deleting super block in metadata cache */
387
0
    if (sblock && H5EA__sblock_unprotect(sblock, H5AC__DIRTIED_FLAG | H5AC__DELETED_FLAG |
388
0
                                                     H5AC__FREE_FILE_SPACE_FLAG) < 0)
389
0
        HDONE_ERROR(H5E_EARRAY, H5E_CANTUNPROTECT, FAIL, "unable to release extensible array super block");
390
391
0
    FUNC_LEAVE_NOAPI(ret_value)
392
0
} /* end H5EA__sblock_delete() */
393
394
/*-------------------------------------------------------------------------
395
 * Function:  H5EA__sblock_dest
396
 *
397
 * Purpose: Destroys an extensible array super block in memory.
398
 *
399
 * Return:  Non-negative on success/Negative on failure
400
 *
401
 *-------------------------------------------------------------------------
402
 */
403
herr_t
404
H5EA__sblock_dest(H5EA_sblock_t *sblock)
405
0
{
406
0
    herr_t ret_value = SUCCEED;
407
408
0
    FUNC_ENTER_PACKAGE
409
410
    /* Sanity check */
411
0
    assert(sblock);
412
0
    assert(!sblock->has_hdr_depend);
413
414
    /* Check if shared header field has been initialized */
415
0
    if (sblock->hdr) {
416
        /* Free buffer for super block data block addresses, if there are any */
417
0
        if (sblock->dblk_addrs)
418
0
            sblock->dblk_addrs = H5FL_SEQ_FREE(haddr_t, sblock->dblk_addrs);
419
420
        /* Free buffer for super block 'page init' bitmask, if there is one */
421
0
        if (sblock->page_init) {
422
0
            assert(sblock->dblk_npages > 0);
423
0
            sblock->page_init = H5FL_BLK_FREE(page_init, sblock->page_init);
424
0
        } /* end if */
425
426
        /* Decrement reference count on shared info */
427
0
        if (H5EA__hdr_decr(sblock->hdr) < 0)
428
0
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTDEC, FAIL,
429
0
                        "can't decrement reference count on shared array header");
430
0
        sblock->hdr = NULL;
431
0
    } /* end if */
432
433
    /* Sanity check */
434
0
    assert(NULL == sblock->top_proxy);
435
436
    /* Free the super block itself */
437
0
    sblock = H5FL_FREE(H5EA_sblock_t, sblock);
438
439
0
done:
440
0
    FUNC_LEAVE_NOAPI(ret_value)
441
0
} /* end H5EA__sblock_dest() */