Coverage Report

Created: 2025-09-04 06:20

/src/hdf5/src/H5D.c
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Source (jump to first uncovered line)
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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
2
 * Copyright by The HDF Group.                                               *
3
 * All rights reserved.                                                      *
4
 *                                                                           *
5
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
6
 * terms governing use, modification, and redistribution, is contained in    *
7
 * the LICENSE file, which can be found at the root of the source code       *
8
 * distribution tree, or in https://www.hdfgroup.org/licenses.               *
9
 * If you do not have access to either file, you may request a copy from     *
10
 * help@hdfgroup.org.                                                        *
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 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
12
13
/****************/
14
/* Module Setup */
15
/****************/
16
17
#include "H5Dmodule.h" /* This source code file is part of the H5D module */
18
19
/***********/
20
/* Headers */
21
/***********/
22
#include "H5private.h"   /* Generic Functions                        */
23
#include "H5CXprivate.h" /* API Contexts                             */
24
#include "H5Dpkg.h"      /* Datasets                                 */
25
#include "H5Eprivate.h"  /* Error handling                           */
26
#include "H5ESprivate.h" /* Event Sets                               */
27
#include "H5FLprivate.h" /* Free lists                               */
28
#include "H5Iprivate.h"  /* IDs                                      */
29
#include "H5MMprivate.h" /* Memory management                        */
30
#include "H5VLprivate.h" /* Virtual Object Layer                     */
31
32
#include "H5VLnative_private.h" /* Native VOL connector                     */
33
34
/****************/
35
/* Local Macros */
36
/****************/
37
38
/******************/
39
/* Local Typedefs */
40
/******************/
41
42
/********************/
43
/* Local Prototypes */
44
/********************/
45
46
/* Helper routines for sync/async API calls */
47
static hid_t  H5D__create_api_common(hid_t loc_id, const char *name, hid_t type_id, hid_t space_id,
48
                                     hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id, void **token_ptr,
49
                                     H5VL_object_t **_vol_obj_ptr);
50
static hid_t  H5D__open_api_common(hid_t loc_id, const char *name, hid_t dapl_id, void **token_ptr,
51
                                   H5VL_object_t **_vol_obj_ptr);
52
static hid_t  H5D__get_space_api_common(hid_t dset_id, void **token_ptr, H5VL_object_t **_vol_obj_ptr);
53
static herr_t H5D__read_api_common(size_t count, hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[],
54
                                   hid_t file_space_id[], hid_t dxpl_id, void *buf[], void **token_ptr,
55
                                   H5VL_object_t **_vol_obj_ptr);
56
static herr_t H5D__write_api_common(size_t count, hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[],
57
                                    hid_t file_space_id[], hid_t dxpl_id, const void *buf[], void **token_ptr,
58
                                    H5VL_object_t **_vol_obj_ptr);
59
static herr_t H5D__set_extent_api_common(hid_t dset_id, const hsize_t size[], void **token_ptr,
60
                                         H5VL_object_t **_vol_obj_ptr);
61
62
/*********************/
63
/* Package Variables */
64
/*********************/
65
66
/* Package initialization variable */
67
bool H5_PKG_INIT_VAR = false;
68
69
/*****************************/
70
/* Library Private Variables */
71
/*****************************/
72
73
/* Declare extern free list to manage the H5S_sel_iter_t struct */
74
H5FL_EXTERN(H5S_sel_iter_t);
75
76
/* Declare extern the free list to manage blocks of type conversion data */
77
H5FL_BLK_EXTERN(type_conv);
78
79
/*******************/
80
/* Local Variables */
81
/*******************/
82
83
/*-------------------------------------------------------------------------
84
 * Function:    H5D__create_api_common
85
 *
86
 * Purpose:     This is the common function for creating HDF5 datasets.
87
 *
88
 * Return:      Success:    A dataset ID
89
 *              Failure:    H5I_INVALID_HID
90
 *
91
 *-------------------------------------------------------------------------
92
 */
93
static hid_t
94
H5D__create_api_common(hid_t loc_id, const char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id,
95
                       hid_t dcpl_id, hid_t dapl_id, void **token_ptr, H5VL_object_t **_vol_obj_ptr)
96
0
{
97
0
    void           *dset        = NULL; /* New dataset's info */
98
0
    H5VL_object_t  *tmp_vol_obj = NULL; /* Object for loc_id */
99
0
    H5VL_object_t **vol_obj_ptr =
100
0
        (_vol_obj_ptr ? _vol_obj_ptr : &tmp_vol_obj); /* Ptr to object ptr for loc_id */
101
0
    H5VL_loc_params_t loc_params;                     /* Location parameters for object access */
102
0
    hid_t             ret_value = H5I_INVALID_HID;    /* Return value */
103
104
0
    FUNC_ENTER_PACKAGE
105
106
    /* Check arguments */
107
0
    if (!name)
108
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "name parameter cannot be NULL");
109
0
    if (!*name)
110
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "name parameter cannot be an empty string");
111
112
    /* Set up object access arguments */
113
0
    if (H5VL_setup_acc_args(loc_id, H5P_CLS_DACC, true, &dapl_id, vol_obj_ptr, &loc_params) < 0)
114
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, H5I_INVALID_HID, "can't set object access arguments");
115
116
    /* Get link creation property list */
117
0
    if (H5P_DEFAULT == lcpl_id)
118
0
        lcpl_id = H5P_LINK_CREATE_DEFAULT;
119
0
    else if (true != H5P_isa_class(lcpl_id, H5P_LINK_CREATE))
120
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "lcpl_id is not a link creation property list");
121
122
    /* Get dataset creation property list */
123
0
    if (H5P_DEFAULT == dcpl_id)
124
0
        dcpl_id = H5P_DATASET_CREATE_DEFAULT;
125
0
    else if (true != H5P_isa_class(dcpl_id, H5P_DATASET_CREATE))
126
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID,
127
0
                    "dcpl_id is not a dataset create property list ID");
128
129
    /* Set the DCPL for the API context */
130
0
    H5CX_set_dcpl(dcpl_id);
131
132
    /* Set the LCPL for the API context */
133
0
    H5CX_set_lcpl(lcpl_id);
134
135
    /* Create the dataset */
136
0
    if (NULL == (dset = H5VL_dataset_create(*vol_obj_ptr, &loc_params, name, lcpl_id, type_id, space_id,
137
0
                                            dcpl_id, dapl_id, H5P_DATASET_XFER_DEFAULT, token_ptr)))
138
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, H5I_INVALID_HID, "unable to create dataset");
139
140
    /* Get an ID for the dataset */
141
0
    if ((ret_value = H5VL_register(H5I_DATASET, dset, H5VL_OBJ_CONNECTOR(*vol_obj_ptr), true)) < 0)
142
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to register dataset");
143
144
0
done:
145
0
    if (H5I_INVALID_HID == ret_value)
146
0
        if (dset && H5VL_dataset_close(*vol_obj_ptr, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
147
0
            HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, H5I_INVALID_HID, "unable to release dataset");
148
149
0
    FUNC_LEAVE_NOAPI(ret_value)
150
0
} /* end H5D__create_api_common() */
151
152
/*-------------------------------------------------------------------------
153
 * Function:    H5Dcreate2
154
 *
155
 * Purpose:     Creates a new dataset named NAME at LOC_ID, opens the
156
 *              dataset for access, and associates with that dataset constant
157
 *              and initial persistent properties including the type of each
158
 *              datapoint as stored in the file (TYPE_ID), the size of the
159
 *              dataset (SPACE_ID), and other initial miscellaneous
160
 *              properties (DCPL_ID).
161
 *
162
 *              All arguments are copied into the dataset, so the caller is
163
 *              allowed to derive new types, dataspaces, and creation
164
 *              parameters from the old ones and reuse them in calls to
165
 *              create other datasets.
166
 *
167
 * Return:      Success:    The object ID of the new dataset. At this
168
 *                          point, the dataset is ready to receive its
169
 *                          raw data. Attempting to read raw data from
170
 *                          the dataset will probably return the fill
171
 *                          value. The dataset should be closed when the
172
 *                          caller is no longer interested in it.
173
 *
174
 *              Failure:    H5I_INVALID_HID
175
 *
176
 *-------------------------------------------------------------------------
177
 */
178
hid_t
179
H5Dcreate2(hid_t loc_id, const char *name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id,
180
           hid_t dapl_id)
181
0
{
182
0
    hid_t ret_value = H5I_INVALID_HID; /* Return value */
183
184
0
    FUNC_ENTER_API(H5I_INVALID_HID)
185
186
    /* Create the dataset synchronously */
187
0
    if ((ret_value = H5D__create_api_common(loc_id, name, type_id, space_id, lcpl_id, dcpl_id, dapl_id, NULL,
188
0
                                            NULL)) < 0)
189
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, H5I_INVALID_HID, "unable to synchronously create dataset");
190
191
0
done:
192
0
    FUNC_LEAVE_API(ret_value)
193
0
} /* end H5Dcreate2() */
194
195
/*-------------------------------------------------------------------------
196
 * Function:    H5Dcreate_async
197
 *
198
 * Purpose:     Asynchronous version of H5Dcreate
199
 *
200
 * Return:      Success:    A dataset ID
201
 *              Failure:    H5I_INVALID_HID
202
 *
203
 *-------------------------------------------------------------------------
204
 */
205
hid_t
206
H5Dcreate_async(const char *app_file, const char *app_func, unsigned app_line, hid_t loc_id, const char *name,
207
                hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id, hid_t es_id)
208
0
{
209
0
    H5VL_object_t *vol_obj   = NULL;            /* Object for loc_id */
210
0
    void          *token     = NULL;            /* Request token for async operation        */
211
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
212
0
    hid_t          ret_value = H5I_INVALID_HID; /* Return value */
213
214
0
    FUNC_ENTER_API(H5I_INVALID_HID)
215
216
    /* Set up request token pointer for asynchronous operation */
217
0
    if (H5ES_NONE != es_id)
218
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
219
220
    /* Create the dataset asynchronously */
221
0
    if ((ret_value = H5D__create_api_common(loc_id, name, type_id, space_id, lcpl_id, dcpl_id, dapl_id,
222
0
                                            token_ptr, &vol_obj)) < 0)
223
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, H5I_INVALID_HID, "unable to asynchronously create dataset");
224
225
    /* If a token was created, add the token to the event set */
226
0
    if (NULL != token)
227
        /* clang-format off */
228
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
229
0
                        H5ARG_TRACE11(__func__, "*s*sIui*siiiiii", app_file, app_func, app_line, loc_id, name, type_id, space_id, lcpl_id, dcpl_id, dapl_id, es_id)) < 0) {
230
            /* clang-format on */
231
0
            if (H5I_dec_app_ref_always_close(ret_value) < 0)
232
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTDEC, H5I_INVALID_HID, "can't decrement count on dataset ID");
233
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, H5I_INVALID_HID, "can't insert token into event set");
234
0
        } /* end if */
235
236
0
done:
237
0
    FUNC_LEAVE_API(ret_value)
238
0
} /* end H5Dcreate_async() */
239
240
/*-------------------------------------------------------------------------
241
 * Function:    H5Dcreate_anon
242
 *
243
 * Purpose:     Creates a new dataset named NAME at LOC_ID, opens the
244
 *              dataset for access, and associates with that dataset constant
245
 *              and initial persistent properties including the type of each
246
 *              datapoint as stored in the file (TYPE_ID), the size of the
247
 *              dataset (SPACE_ID), and other initial miscellaneous
248
 *              properties (DCPL_ID).
249
 *
250
 *              All arguments are copied into the dataset, so the caller is
251
 *              allowed to derive new types, dataspaces, and creation
252
 *              parameters from the old ones and reuse them in calls to
253
 *              create other datasets.
254
 *
255
 *              The resulting ID should be linked into the file with
256
 *              H5Olink or it will be deleted when closed.
257
 *
258
 * Return:      Success:    The object ID of the new dataset. At this
259
 *                          point, the dataset is ready to receive its
260
 *                          raw data. Attempting to read raw data from
261
 *                          the dataset will probably return the fill
262
 *                          value. The dataset should be linked into
263
 *                          the group hierarchy before being closed or
264
 *                          it will be deleted. The dataset should be
265
 *                          closed when the caller is no longer interested
266
 *                          in it.
267
 *
268
 *              Failure:    H5I_INVALID_HID
269
 *
270
 *-------------------------------------------------------------------------
271
 */
272
hid_t
273
H5Dcreate_anon(hid_t loc_id, hid_t type_id, hid_t space_id, hid_t dcpl_id, hid_t dapl_id)
274
0
{
275
0
    void             *dset    = NULL;              /* dset object from VOL connector */
276
0
    H5VL_object_t    *vol_obj = NULL;              /* Object for loc_id */
277
0
    H5VL_loc_params_t loc_params;                  /* Location parameters for object access */
278
0
    hid_t             ret_value = H5I_INVALID_HID; /* Return value */
279
280
0
    FUNC_ENTER_API(H5I_INVALID_HID)
281
282
    /* Check arguments */
283
0
    if (H5P_DEFAULT == dcpl_id)
284
0
        dcpl_id = H5P_DATASET_CREATE_DEFAULT;
285
0
    else if (true != H5P_isa_class(dcpl_id, H5P_DATASET_CREATE))
286
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "not dataset create property list ID");
287
288
0
    if (H5P_DEFAULT == dapl_id)
289
0
        dapl_id = H5P_DATASET_ACCESS_DEFAULT;
290
0
    else if (true != H5P_isa_class(dapl_id, H5P_DATASET_ACCESS))
291
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "not dataset access property list ID");
292
293
    /* Set the DCPL for the API context */
294
0
    H5CX_set_dcpl(dcpl_id);
295
296
    /* Verify access property list and set up collective metadata if appropriate */
297
0
    if (H5CX_set_apl(&dapl_id, H5P_CLS_DACC, loc_id, true) < 0)
298
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, H5I_INVALID_HID, "can't set access property list info");
299
300
    /* get the location object */
301
0
    if (NULL == (vol_obj = H5VL_vol_object(loc_id)))
302
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "invalid location identifier");
303
304
    /* Set location parameters */
305
0
    loc_params.type     = H5VL_OBJECT_BY_SELF;
306
0
    loc_params.obj_type = H5I_get_type(loc_id);
307
308
    /* Create the dataset */
309
0
    if (NULL ==
310
0
        (dset = H5VL_dataset_create(vol_obj, &loc_params, NULL, H5P_LINK_CREATE_DEFAULT, type_id, space_id,
311
0
                                    dcpl_id, dapl_id, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL)))
312
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, H5I_INVALID_HID, "unable to create dataset");
313
314
    /* Get an ID for the dataset */
315
0
    if ((ret_value = H5VL_register(H5I_DATASET, dset, H5VL_OBJ_CONNECTOR(vol_obj), true)) < 0)
316
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to register dataset");
317
318
0
done:
319
    /* Cleanup on failure */
320
0
    if (H5I_INVALID_HID == ret_value)
321
0
        if (dset && H5VL_dataset_close(vol_obj, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
322
0
            HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, H5I_INVALID_HID, "unable to release dataset");
323
324
0
    FUNC_LEAVE_API(ret_value)
325
0
} /* end H5Dcreate_anon() */
326
327
/*-------------------------------------------------------------------------
328
 * Function:    H5D__open_api_common
329
 *
330
 * Purpose:     This is the common function for opening a dataset
331
 *
332
 * Return:      Success:    Object ID of the dataset
333
 *              Failure:    H5I_INVALID_HID
334
 *
335
 *-------------------------------------------------------------------------
336
 */
337
static hid_t
338
H5D__open_api_common(hid_t loc_id, const char *name, hid_t dapl_id, void **token_ptr,
339
                     H5VL_object_t **_vol_obj_ptr)
340
0
{
341
0
    void           *dset        = NULL; /* dset object from VOL connector */
342
0
    H5VL_object_t  *tmp_vol_obj = NULL; /* Object for loc_id */
343
0
    H5VL_object_t **vol_obj_ptr =
344
0
        (_vol_obj_ptr ? _vol_obj_ptr : &tmp_vol_obj); /* Ptr to object ptr for loc_id */
345
0
    H5VL_loc_params_t loc_params;                     /* Location parameters for object access */
346
0
    hid_t             ret_value = H5I_INVALID_HID;    /* Return value */
347
348
0
    FUNC_ENTER_PACKAGE
349
350
    /* Check args */
351
0
    if (!name)
352
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "name parameter cannot be NULL");
353
0
    if (!*name)
354
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "name parameter cannot be an empty string");
355
356
    /* Set up object access arguments */
357
0
    if (H5VL_setup_acc_args(loc_id, H5P_CLS_DACC, false, &dapl_id, vol_obj_ptr, &loc_params) < 0)
358
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, H5I_INVALID_HID, "can't set object access arguments");
359
360
    /* Open the dataset */
361
0
    if (NULL == (dset = H5VL_dataset_open(*vol_obj_ptr, &loc_params, name, dapl_id, H5P_DATASET_XFER_DEFAULT,
362
0
                                          token_ptr)))
363
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTOPENOBJ, H5I_INVALID_HID, "unable to open dataset");
364
365
    /* Register an atom for the dataset */
366
0
    if ((ret_value = H5VL_register(H5I_DATASET, dset, H5VL_OBJ_CONNECTOR(*vol_obj_ptr), true)) < 0)
367
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTREGISTER, H5I_INVALID_HID, "can't register dataset ID");
368
369
0
done:
370
0
    if (H5I_INVALID_HID == ret_value)
371
0
        if (dset && H5VL_dataset_close(*vol_obj_ptr, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
372
0
            HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, H5I_INVALID_HID, "unable to release dataset");
373
374
0
    FUNC_LEAVE_NOAPI(ret_value)
375
0
} /* H5D__open_api_common() */
376
377
/*-------------------------------------------------------------------------
378
 * Function:    H5Dopen2
379
 *
380
 * Purpose:     Finds a dataset named NAME at LOC_ID, opens it, and returns
381
 *              its ID. The dataset should be close when the caller is no
382
 *              longer interested in it.
383
 *
384
 *              Takes a dataset access property list
385
 *
386
 * Return:      Success:    Object ID of the dataset
387
 *
388
 *              Failure:    H5I_INVALID_HID
389
 *
390
 *-------------------------------------------------------------------------
391
 */
392
hid_t
393
H5Dopen2(hid_t loc_id, const char *name, hid_t dapl_id)
394
0
{
395
0
    hid_t ret_value = H5I_INVALID_HID; /* Return value */
396
397
0
    FUNC_ENTER_API(H5I_INVALID_HID)
398
399
    /* Open the dataset synchronously */
400
0
    if ((ret_value = H5D__open_api_common(loc_id, name, dapl_id, NULL, NULL)) < 0)
401
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTOPENOBJ, H5I_INVALID_HID, "unable to synchronously open dataset");
402
403
0
done:
404
0
    FUNC_LEAVE_API(ret_value)
405
0
} /* end H5Dopen2() */
406
407
/*-------------------------------------------------------------------------
408
 * Function:    H5Dopen_async
409
 *
410
 * Purpose:     Asynchronous version of H5Dopen2
411
 *
412
 * Return:      Success:    A group ID
413
 *              Failure:    H5I_INVALID_HID
414
 *
415
 *-------------------------------------------------------------------------
416
 */
417
hid_t
418
H5Dopen_async(const char *app_file, const char *app_func, unsigned app_line, hid_t loc_id, const char *name,
419
              hid_t dapl_id, hid_t es_id)
420
0
{
421
0
    H5VL_object_t *vol_obj   = NULL;            /* Object for loc_id */
422
0
    void          *token     = NULL;            /* Request token for async operation        */
423
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
424
0
    hid_t          ret_value = H5I_INVALID_HID; /* Return value */
425
426
0
    FUNC_ENTER_API(H5I_INVALID_HID)
427
428
    /* Set up request token pointer for asynchronous operation */
429
0
    if (H5ES_NONE != es_id)
430
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
431
432
    /* Open the dataset asynchronously */
433
0
    if ((ret_value = H5D__open_api_common(loc_id, name, dapl_id, token_ptr, &vol_obj)) < 0)
434
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTOPENOBJ, H5I_INVALID_HID, "unable to asynchronously open dataset");
435
436
    /* If a token was created, add the token to the event set */
437
0
    if (NULL != token)
438
        /* clang-format off */
439
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
440
0
                        H5ARG_TRACE7(__func__, "*s*sIui*sii", app_file, app_func, app_line, loc_id, name, dapl_id, es_id)) < 0) {
441
            /* clang-format on */
442
0
            if (H5I_dec_app_ref_always_close(ret_value) < 0)
443
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTDEC, H5I_INVALID_HID, "can't decrement count on dataset ID");
444
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, H5I_INVALID_HID, "can't insert token into event set");
445
0
        } /* end if */
446
447
0
done:
448
0
    FUNC_LEAVE_API(ret_value)
449
0
} /* end H5Dopen_async() */
450
451
/*-------------------------------------------------------------------------
452
 * Function:    H5Dclose
453
 *
454
 * Purpose:     Closes access to a dataset and releases resources used by
455
 *              it. It is illegal to subsequently use that same dataset
456
 *              ID in calls to other dataset functions.
457
 *
458
 * Return:      Non-negative on success/Negative on failure
459
 *
460
 *-------------------------------------------------------------------------
461
 */
462
herr_t
463
H5Dclose(hid_t dset_id)
464
0
{
465
0
    herr_t ret_value = SUCCEED; /* Return value                     */
466
467
0
    FUNC_ENTER_API(FAIL)
468
469
    /* Check args */
470
0
    if (H5I_DATASET != H5I_get_type(dset_id))
471
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset ID");
472
473
    /* Decrement the counter on the dataset.  It will be freed if the count
474
     * reaches zero.
475
     */
476
0
    if (H5I_dec_app_ref_always_close(dset_id) < 0)
477
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTDEC, FAIL, "can't decrement count on dataset ID");
478
479
0
done:
480
0
    FUNC_LEAVE_API(ret_value)
481
0
} /* end H5Dclose() */
482
483
/*-------------------------------------------------------------------------
484
 * Function:    H5Dclose_async
485
 *
486
 * Purpose:     Asynchronous version of H5Dclose
487
 *
488
 * Return:      Non-negative on success/Negative on failure
489
 *
490
 *-------------------------------------------------------------------------
491
 */
492
herr_t
493
H5Dclose_async(const char *app_file, const char *app_func, unsigned app_line, hid_t dset_id, hid_t es_id)
494
0
{
495
0
    void             *token     = NULL;            /* Request token for async operation        */
496
0
    void            **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
497
0
    H5VL_object_t    *vol_obj   = NULL;            /* VOL object of dset_id */
498
0
    H5VL_connector_t *connector = NULL;            /* VOL connector */
499
0
    herr_t            ret_value = SUCCEED;         /* Return value */
500
501
0
    FUNC_ENTER_API(FAIL)
502
503
    /* Check args */
504
0
    if (H5I_DATASET != H5I_get_type(dset_id))
505
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset ID");
506
507
    /* Get dataset object's connector */
508
0
    if (NULL == (vol_obj = H5VL_vol_object(dset_id)))
509
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get VOL object for dataset");
510
511
    /* Prepare for possible asynchronous operation */
512
0
    if (H5ES_NONE != es_id) {
513
        /* Increase connector's refcount, so it doesn't get closed if closing
514
         * the dataset closes the file */
515
0
        connector = H5VL_OBJ_CONNECTOR(vol_obj);
516
0
        H5VL_conn_inc_rc(connector);
517
518
        /* Point at token for operation to set up */
519
0
        token_ptr = &token;
520
0
    } /* end if */
521
522
    /* Decrement the counter on the dataset.  It will be freed if the count
523
     * reaches zero.
524
     */
525
0
    if (H5I_dec_app_ref_always_close_async(dset_id, token_ptr) < 0)
526
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTDEC, FAIL, "can't decrement count on dataset ID");
527
528
    /* If a token was created, add the token to the event set */
529
0
    if (NULL != token)
530
        /* clang-format off */
531
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
532
0
                        H5ARG_TRACE5(__func__, "*s*sIuii", app_file, app_func, app_line, dset_id, es_id)) < 0)
533
            /* clang-format on */
534
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, FAIL, "can't insert token into event set");
535
536
0
done:
537
0
    if (connector && H5VL_conn_dec_rc(connector) < 0)
538
0
        HDONE_ERROR(H5E_DATASET, H5E_CANTDEC, FAIL, "can't decrement ref count on connector");
539
540
0
    FUNC_LEAVE_API(ret_value)
541
0
} /* end H5Dclose_async() */
542
543
/*-------------------------------------------------------------------------
544
 * Function:    H5D__get_space_api_common
545
 *
546
 * Purpose:     This is the common function for getting a dataset's dataspace
547
 *
548
 * Return:      Success:    ID for a copy of the dataspace.
549
 *              Failure:    H5I_INVALID_HID
550
 *
551
 *-------------------------------------------------------------------------
552
 */
553
static hid_t
554
H5D__get_space_api_common(hid_t dset_id, void **token_ptr, H5VL_object_t **_vol_obj_ptr)
555
0
{
556
0
    H5VL_object_t  *tmp_vol_obj = NULL; /* Object for loc_id */
557
0
    H5VL_object_t **vol_obj_ptr =
558
0
        (_vol_obj_ptr ? _vol_obj_ptr : &tmp_vol_obj);    /* Ptr to object ptr for loc_id */
559
0
    H5VL_dataset_get_args_t vol_cb_args;                 /* Arguments to VOL callback */
560
0
    hid_t                   ret_value = H5I_INVALID_HID; /* Return value         */
561
562
0
    FUNC_ENTER_PACKAGE
563
564
    /* Check args */
565
0
    if (NULL == (*vol_obj_ptr = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
566
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "invalid dataset identifier");
567
568
    /* Set up VOL callback arguments */
569
0
    vol_cb_args.op_type                 = H5VL_DATASET_GET_SPACE;
570
0
    vol_cb_args.args.get_space.space_id = H5I_INVALID_HID;
571
572
    /* Get the dataspace */
573
0
    if (H5VL_dataset_get(*vol_obj_ptr, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, token_ptr) < 0)
574
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, H5I_INVALID_HID, "unable to get dataspace");
575
576
    /* Set return value */
577
0
    ret_value = vol_cb_args.args.get_space.space_id;
578
579
0
done:
580
0
    FUNC_LEAVE_NOAPI(ret_value)
581
0
} /* H5D__get_space_api_common() */
582
583
/*-------------------------------------------------------------------------
584
 * Function:    H5Dget_space
585
 *
586
 * Purpose:     Returns a copy of the file dataspace for a dataset.
587
 *
588
 * Return:      Success:    ID for a copy of the dataspace.  The data
589
 *                          space should be released by calling
590
 *                          H5Sclose().
591
 *
592
 *              Failure:    H5I_INVALID_HID
593
 *
594
 *-------------------------------------------------------------------------
595
 */
596
hid_t
597
H5Dget_space(hid_t dset_id)
598
0
{
599
0
    hid_t ret_value = H5I_INVALID_HID; /* Return value */
600
601
0
    FUNC_ENTER_API(H5I_INVALID_HID)
602
603
    /* Get the dataset's dataspace synchronously */
604
0
    if ((ret_value = H5D__get_space_api_common(dset_id, NULL, NULL)) < 0)
605
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, H5I_INVALID_HID, "unable to synchronously get dataspace");
606
607
0
done:
608
0
    FUNC_LEAVE_API(ret_value)
609
0
} /* end H5Dget_space() */
610
611
/*-------------------------------------------------------------------------
612
 * Function:    H5Dget_space_async
613
 *
614
 * Purpose:     Asynchronous version of H5Dget_space
615
 *
616
 * Return:      Success:    ID for a copy of the dataspace.  The data
617
 *                          space should be released by calling
618
 *                          H5Sclose().
619
 *
620
 *              Failure:    H5I_INVALID_HID
621
 *
622
 *-------------------------------------------------------------------------
623
 */
624
hid_t
625
H5Dget_space_async(const char *app_file, const char *app_func, unsigned app_line, hid_t dset_id, hid_t es_id)
626
0
{
627
0
    H5VL_object_t *vol_obj   = NULL;            /* Object for loc_id */
628
0
    void          *token     = NULL;            /* Request token for async operation        */
629
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
630
0
    hid_t          ret_value = H5I_INVALID_HID; /* Return value */
631
632
0
    FUNC_ENTER_API(H5I_INVALID_HID)
633
634
    /* Set up request token pointer for asynchronous operation */
635
0
    if (H5ES_NONE != es_id)
636
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
637
638
    /* Get the dataset's dataspace asynchronously */
639
0
    if ((ret_value = H5D__get_space_api_common(dset_id, token_ptr, &vol_obj)) < 0)
640
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, H5I_INVALID_HID, "unable to asynchronously get dataspace");
641
642
    /* If a token was created, add the token to the event set */
643
0
    if (NULL != token)
644
        /* clang-format off */
645
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
646
0
                        H5ARG_TRACE5(__func__, "*s*sIuii", app_file, app_func, app_line, dset_id, es_id)) < 0) {
647
            /* clang-format on */
648
0
            if (H5I_dec_app_ref(ret_value) < 0)
649
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTDEC, H5I_INVALID_HID,
650
0
                            "can't decrement count on dataspace ID");
651
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, H5I_INVALID_HID, "can't insert token into event set");
652
0
        } /* end if */
653
654
0
done:
655
0
    FUNC_LEAVE_API(ret_value)
656
0
} /* end H5Dget_space_async() */
657
658
/*-------------------------------------------------------------------------
659
 * Function:    H5Dget_space_status
660
 *
661
 * Purpose:     Returns the status of dataspace allocation.
662
 *
663
 * Return:      Non-negative on success/Negative on failure
664
 *
665
 *-------------------------------------------------------------------------
666
 */
667
herr_t
668
H5Dget_space_status(hid_t dset_id, H5D_space_status_t *allocation /*out*/)
669
0
{
670
0
    H5VL_object_t          *vol_obj;             /* Object for loc_id */
671
0
    H5VL_dataset_get_args_t vol_cb_args;         /* Arguments to VOL callback */
672
0
    herr_t                  ret_value = SUCCEED; /* Return value         */
673
674
0
    FUNC_ENTER_API(FAIL)
675
676
    /* Check args */
677
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
678
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
679
680
    /* Set up VOL callback arguments */
681
0
    vol_cb_args.op_type                      = H5VL_DATASET_GET_SPACE_STATUS;
682
0
    vol_cb_args.args.get_space_status.status = allocation;
683
684
    /* Get dataspace status */
685
0
    if (H5VL_dataset_get(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
686
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "unable to get space status");
687
688
0
done:
689
0
    FUNC_LEAVE_API(ret_value)
690
0
} /* H5Dget_space_status() */
691
692
/*-------------------------------------------------------------------------
693
 * Function:    H5Dget_type
694
 *
695
 * Purpose:     Returns a copy of the file datatype for a dataset.
696
 *
697
 * Return:      Success:    ID for a copy of the datatype. The data
698
 *                          type should be released by calling
699
 *                          H5Tclose().
700
 *
701
 *              Failure:    H5I_INVALID_HID
702
 *
703
 *-------------------------------------------------------------------------
704
 */
705
hid_t
706
H5Dget_type(hid_t dset_id)
707
0
{
708
0
    H5VL_object_t          *vol_obj;                     /* Object for loc_id */
709
0
    H5VL_dataset_get_args_t vol_cb_args;                 /* Arguments to VOL callback */
710
0
    hid_t                   ret_value = H5I_INVALID_HID; /* Return value         */
711
712
0
    FUNC_ENTER_API(H5I_INVALID_HID)
713
714
    /* Check args */
715
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
716
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "invalid dataset identifier");
717
718
    /* Set up VOL callback arguments */
719
0
    vol_cb_args.op_type               = H5VL_DATASET_GET_TYPE;
720
0
    vol_cb_args.args.get_type.type_id = H5I_INVALID_HID;
721
722
    /* Get the datatype */
723
0
    if (H5VL_dataset_get(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
724
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, H5I_INVALID_HID, "unable to get datatype");
725
726
    /* Set return value */
727
0
    ret_value = vol_cb_args.args.get_type.type_id;
728
729
0
done:
730
0
    FUNC_LEAVE_API(ret_value)
731
0
} /* end H5Dget_type() */
732
733
/*-------------------------------------------------------------------------
734
 * Function:    H5Dget_create_plist
735
 *
736
 * Purpose:     Returns a copy of the dataset creation property list.
737
 *
738
 * Return:      Success:    ID for a copy of the dataset creation
739
 *                          property list.  The template should be
740
 *                          released by calling H5P_close().
741
 *
742
 *              Failure:    H5I_INVALID_HID
743
 *
744
 *-------------------------------------------------------------------------
745
 */
746
hid_t
747
H5Dget_create_plist(hid_t dset_id)
748
0
{
749
0
    H5VL_object_t          *vol_obj;                     /* Object for loc_id */
750
0
    H5VL_dataset_get_args_t vol_cb_args;                 /* Arguments to VOL callback */
751
0
    hid_t                   ret_value = H5I_INVALID_HID; /* Return value         */
752
753
0
    FUNC_ENTER_API(H5I_INVALID_HID)
754
755
    /* Check args */
756
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
757
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "invalid dataset identifier");
758
759
    /* Set up VOL callback arguments */
760
0
    vol_cb_args.op_type               = H5VL_DATASET_GET_DCPL;
761
0
    vol_cb_args.args.get_dcpl.dcpl_id = H5I_INVALID_HID;
762
763
    /* Get the dataset creation property list */
764
0
    if (H5VL_dataset_get(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
765
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, H5I_INVALID_HID, "unable to get dataset creation properties");
766
767
    /* Set return value */
768
0
    ret_value = vol_cb_args.args.get_dcpl.dcpl_id;
769
770
0
done:
771
0
    FUNC_LEAVE_API(ret_value)
772
0
} /* end H5Dget_create_plist() */
773
774
/*-------------------------------------------------------------------------
775
 * Function:    H5Dget_access_plist
776
 *
777
 * Purpose:     Returns a copy of the dataset access property list.
778
 *
779
 * Description: H5Dget_access_plist returns the dataset access property
780
 *              list identifier of the specified dataset.
781
 *
782
 *              The chunk cache parameters in the returned property lists will be
783
 *              those used by the dataset.  If the properties in the file access
784
 *              property list were used to determine the dataset's chunk cache
785
 *              configuration, then those properties will be present in the
786
 *              returned dataset access property list.  If the dataset does not
787
 *              use a chunked layout, then the chunk cache properties will be set
788
 *              to the default.  The chunk cache properties in the returned list
789
 *              are considered to be “set”, and any use of this list will override
790
 *              the corresponding properties in the file's file access property
791
 *              list.
792
 *
793
 *              All link access properties in the returned list will be set to the
794
 *              default values.
795
 *
796
 * Return:      Success:    ID for a copy of the dataset access
797
 *                          property list.  The template should be
798
 *                          released by calling H5Pclose().
799
 *
800
 *              Failure:    H5I_INVALID_HID
801
 *
802
 *-------------------------------------------------------------------------
803
 */
804
hid_t
805
H5Dget_access_plist(hid_t dset_id)
806
0
{
807
0
    H5VL_object_t          *vol_obj;                     /* Object for loc_id */
808
0
    H5VL_dataset_get_args_t vol_cb_args;                 /* Arguments to VOL callback */
809
0
    hid_t                   ret_value = H5I_INVALID_HID; /* Return value         */
810
811
0
    FUNC_ENTER_API(H5I_INVALID_HID)
812
813
    /* Check args */
814
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
815
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "invalid dataset identifier");
816
817
    /* Set up VOL callback arguments */
818
0
    vol_cb_args.op_type               = H5VL_DATASET_GET_DAPL;
819
0
    vol_cb_args.args.get_dapl.dapl_id = H5I_INVALID_HID;
820
821
    /* Get the dataset access property list */
822
0
    if (H5VL_dataset_get(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
823
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, H5I_INVALID_HID, "unable to get dataset access properties");
824
825
    /* Set return value */
826
0
    ret_value = vol_cb_args.args.get_dapl.dapl_id;
827
828
0
done:
829
0
    FUNC_LEAVE_API(ret_value)
830
0
} /* end H5Dget_access_plist() */
831
832
/*-------------------------------------------------------------------------
833
 * Function:    H5Dget_storage_size
834
 *
835
 * Purpose:     Returns the amount of storage that is required for the
836
 *              dataset. For chunked datasets this is the number of allocated
837
 *              chunks times the chunk size.
838
 *
839
 * Return:      Success:    The amount of storage space allocated for the
840
 *                          dataset, not counting meta data. The return
841
 *                          value may be zero if no data has been stored.
842
 *
843
 *              Failure:    Zero
844
 *
845
 *-------------------------------------------------------------------------
846
 */
847
hsize_t
848
H5Dget_storage_size(hid_t dset_id)
849
0
{
850
0
    H5VL_object_t          *vol_obj;          /* Object for loc_id */
851
0
    H5VL_dataset_get_args_t vol_cb_args;      /* Arguments to VOL callback */
852
0
    hsize_t                 storage_size = 0; /* Storage size of dataset */
853
0
    hsize_t                 ret_value    = 0; /* Return value                 */
854
855
0
    FUNC_ENTER_API(0)
856
857
    /* Check args */
858
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
859
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "invalid dataset identifier");
860
861
    /* Set up VOL callback arguments */
862
0
    vol_cb_args.op_type                            = H5VL_DATASET_GET_STORAGE_SIZE;
863
0
    vol_cb_args.args.get_storage_size.storage_size = &storage_size;
864
865
    /* Get the storage size */
866
0
    if (H5VL_dataset_get(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
867
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, 0, "unable to get storage size");
868
869
    /* Set return value */
870
0
    ret_value = storage_size;
871
872
0
done:
873
0
    FUNC_LEAVE_API(ret_value)
874
0
} /* end H5Dget_storage_size() */
875
876
/*-------------------------------------------------------------------------
877
 * Function:    H5Dget_offset
878
 *
879
 * Purpose:     Returns the address of dataset in file.
880
 *
881
 * Return:      Success:    The address of dataset
882
 *
883
 *              Failure:    HADDR_UNDEF (can also be a valid return value!)
884
 *
885
 *-------------------------------------------------------------------------
886
 */
887
haddr_t
888
H5Dget_offset(hid_t dset_id)
889
0
{
890
0
    H5VL_object_t                      *vol_obj;                   /* Dataset for this operation   */
891
0
    H5VL_optional_args_t                vol_cb_args;               /* Arguments to VOL callback */
892
0
    H5VL_native_dataset_optional_args_t dset_opt_args;             /* Arguments for optional operation */
893
0
    haddr_t                             dset_offset = HADDR_UNDEF; /* Dataset's offset */
894
0
    haddr_t                             ret_value   = HADDR_UNDEF; /* Return value                 */
895
896
0
    FUNC_ENTER_API(HADDR_UNDEF)
897
898
    /* Check args */
899
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
900
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, HADDR_UNDEF, "invalid dataset identifier");
901
902
    /* Set up VOL callback arguments */
903
0
    dset_opt_args.get_offset.offset = &dset_offset;
904
0
    vol_cb_args.op_type             = H5VL_NATIVE_DATASET_GET_OFFSET;
905
0
    vol_cb_args.args                = &dset_opt_args;
906
907
    /* Get the offset */
908
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
909
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, HADDR_UNDEF, "unable to get offset");
910
911
    /* Set return value */
912
0
    ret_value = dset_offset;
913
914
0
done:
915
0
    FUNC_LEAVE_API(ret_value)
916
0
} /* end H5Dget_offset() */
917
918
/*-------------------------------------------------------------------------
919
 * Function:    H5D__read_api_common
920
 *
921
 * Purpose:     Common helper routine for sync/async dataset read operations.
922
 *
923
 * Return:      SUCCEED/FAIL
924
 *
925
 *-------------------------------------------------------------------------
926
 */
927
static herr_t
928
H5D__read_api_common(size_t count, hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[],
929
                     hid_t file_space_id[], hid_t dxpl_id, void *buf[], void **token_ptr,
930
                     H5VL_object_t **_vol_obj_ptr)
931
0
{
932
0
    H5VL_object_t  *tmp_vol_obj = NULL; /* Object for loc_id */
933
0
    H5VL_object_t **vol_obj_ptr =
934
0
        (_vol_obj_ptr ? _vol_obj_ptr : &tmp_vol_obj); /* Ptr to object ptr for loc_id */
935
0
    void             *obj_local;                      /* Local buffer for obj */
936
0
    void            **obj = &obj_local;               /* Array of object pointers */
937
0
    H5VL_connector_t *connector;                      /* VOL connector pointer */
938
0
    size_t            i;                              /* Local index variable */
939
0
    herr_t            ret_value = SUCCEED;            /* Return value */
940
941
0
    FUNC_ENTER_PACKAGE
942
943
    /* Check arguments */
944
0
    if (count == 0)
945
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "count must be greater than 0");
946
0
    if (!dset_id)
947
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dset_id array not provided");
948
0
    if (!mem_type_id)
949
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "mem_type_id array not provided");
950
0
    if (!mem_space_id)
951
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "mem_space_id array not provided");
952
0
    if (!file_space_id)
953
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "file_space_id array not provided");
954
0
    if (!buf)
955
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "buf array not provided");
956
957
    /* Allocate obj array if necessary */
958
0
    if (count > 1)
959
0
        if (NULL == (obj = (void **)H5MM_malloc(count * sizeof(void *))))
960
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "can't allocate space for object array");
961
962
    /* Get vol_obj_ptr (return just the first dataset to caller if requested) */
963
0
    if (NULL == (*vol_obj_ptr = H5VL_vol_object_verify(dset_id[0], H5I_DATASET)))
964
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id is not a dataset ID");
965
966
    /* Save the connector of the first dataset.  Unpack the connector and call
967
     * the "direct" read function here to avoid allocating an array of count
968
     * H5VL_object_ts. */
969
0
    connector = H5VL_OBJ_CONNECTOR(*vol_obj_ptr);
970
971
    /* Build obj array */
972
0
    obj[0] = H5VL_OBJ_DATA(*vol_obj_ptr);
973
0
    for (i = 1; i < count; i++) {
974
0
        htri_t cls_cmp;
975
976
        /* Get the object */
977
0
        if (NULL == (tmp_vol_obj = H5VL_vol_object_verify(dset_id[i], H5I_DATASET)))
978
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id is not a dataset ID");
979
0
        obj[i] = H5VL_OBJ_DATA(tmp_vol_obj);
980
981
        /* Make sure the class matches */
982
0
        if ((cls_cmp = H5VL_conn_same_class(H5VL_OBJ_CONNECTOR(tmp_vol_obj), connector)) < 0)
983
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTCOMPARE, FAIL, "can't compare VOL connectors");
984
0
        if (!cls_cmp)
985
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL,
986
0
                        "datasets are accessed through different VOL connectors and can't be used in the "
987
0
                        "same I/O call");
988
0
    }
989
990
    /* Get the default dataset transfer property list if the user didn't provide one */
991
0
    if (H5P_DEFAULT == dxpl_id)
992
0
        dxpl_id = H5P_DATASET_XFER_DEFAULT;
993
0
    else if (true != H5P_isa_class(dxpl_id, H5P_DATASET_XFER))
994
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not xfer parms");
995
996
    /* Read the data */
997
0
    if (H5VL_dataset_read(count, obj, connector, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf,
998
0
                          token_ptr) < 0)
999
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read data");
1000
1001
0
done:
1002
    /* Free memory */
1003
0
    if (obj != &obj_local)
1004
0
        H5MM_free(obj);
1005
1006
0
    FUNC_LEAVE_NOAPI(ret_value)
1007
0
} /* end H5D__read_api_common() */
1008
1009
/*-------------------------------------------------------------------------
1010
 * Function:    H5Dread
1011
 *
1012
 * Purpose:     Reads (part of) a DSET from the file into application
1013
 *              memory BUF. The part of the dataset to read is defined with
1014
 *              MEM_SPACE_ID and FILE_SPACE_ID. The data points are
1015
 *              converted from their file type to the MEM_TYPE_ID specified.
1016
 *              Additional miscellaneous data transfer properties can be
1017
 *              passed to this function with the PLIST_ID argument.
1018
 *
1019
 *              The FILE_SPACE_ID can be the constant H5S_ALL which indicates
1020
 *              that the entire file dataspace is to be referenced.
1021
 *
1022
 *              The MEM_SPACE_ID can be the constant H5S_ALL in which case
1023
 *              the memory dataspace is the same as the file dataspace
1024
 *              defined when the dataset was created.  The MEM_SPACE_ID can
1025
 *              also be the constant H5S_BLOCK, which indicates that the
1026
 *              buffer provided is a single contiguous block of memory, with
1027
 *              the same # of elements as specified in the FILE_SPACE_ID
1028
 *              selection.
1029
 *
1030
 *              The number of elements in the memory dataspace must match
1031
 *              the number of elements in the file dataspace.
1032
 *
1033
 *              The PLIST_ID can be the constant H5P_DEFAULT in which
1034
 *              case the default data transfer properties are used.
1035
 *
1036
 * Return:      Non-negative on success/Negative on failure
1037
 *
1038
 *-------------------------------------------------------------------------
1039
 */
1040
herr_t
1041
H5Dread(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t dxpl_id,
1042
        void *buf /*out*/)
1043
0
{
1044
0
    herr_t ret_value = SUCCEED; /* Return value */
1045
1046
0
    FUNC_ENTER_API(FAIL)
1047
1048
    /* Read the data */
1049
0
    if (H5D__read_api_common(1, &dset_id, &mem_type_id, &mem_space_id, &file_space_id, dxpl_id, &buf, NULL,
1050
0
                             NULL) < 0)
1051
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't synchronously read data");
1052
1053
0
done:
1054
0
    FUNC_LEAVE_API(ret_value)
1055
0
} /* end H5Dread() */
1056
1057
/*-------------------------------------------------------------------------
1058
 * Function:    H5Dread_async
1059
 *
1060
 * Purpose:     Asynchronously read dataset elements.
1061
 *
1062
 * Return:      Non-negative on success/Negative on failure
1063
 *
1064
 *-------------------------------------------------------------------------
1065
 */
1066
herr_t
1067
H5Dread_async(const char *app_file, const char *app_func, unsigned app_line, hid_t dset_id, hid_t mem_type_id,
1068
              hid_t mem_space_id, hid_t file_space_id, hid_t dxpl_id, void *buf /*out*/, hid_t es_id)
1069
0
{
1070
0
    H5VL_object_t *vol_obj   = NULL;            /* Dataset VOL object */
1071
0
    void          *token     = NULL;            /* Request token for async operation        */
1072
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
1073
0
    herr_t         ret_value = SUCCEED;         /* Return value */
1074
1075
0
    FUNC_ENTER_API(FAIL)
1076
1077
    /* Set up request token pointer for asynchronous operation */
1078
0
    if (H5ES_NONE != es_id)
1079
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
1080
1081
    /* Read the data */
1082
0
    if (H5D__read_api_common(1, &dset_id, &mem_type_id, &mem_space_id, &file_space_id, dxpl_id, &buf,
1083
0
                             token_ptr, &vol_obj) < 0)
1084
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't asynchronously read data");
1085
1086
    /* If a token was created, add the token to the event set */
1087
0
    if (NULL != token)
1088
        /* clang-format off */
1089
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
1090
0
                        H5ARG_TRACE10(__func__, "*s*sIuiiiii*xi", app_file, app_func, app_line, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf, es_id)) < 0)
1091
            /* clang-format on */
1092
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, FAIL, "can't insert token into event set");
1093
1094
0
done:
1095
0
    FUNC_LEAVE_API(ret_value)
1096
0
} /* end H5Dread_async() */
1097
1098
/*-------------------------------------------------------------------------
1099
 * Function:  H5Dread_multi
1100
 *
1101
 * Purpose: Multi-version of H5Dread(), which reads selections from
1102
 *              multiple datasets from a file into application memory BUFS.
1103
 *
1104
 * Return:  Non-negative on success/Negative on failure
1105
 *
1106
 *-------------------------------------------------------------------------
1107
 */
1108
herr_t
1109
H5Dread_multi(size_t count, hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[],
1110
              hid_t dxpl_id, void *buf[] /*out*/)
1111
0
{
1112
0
    herr_t ret_value = SUCCEED; /* Return value */
1113
1114
0
    FUNC_ENTER_API(FAIL)
1115
1116
0
    if (count == 0)
1117
0
        HGOTO_DONE(SUCCEED);
1118
1119
    /* Read the data */
1120
0
    if (H5D__read_api_common(count, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf, NULL,
1121
0
                             NULL) < 0)
1122
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't synchronously read data");
1123
1124
0
done:
1125
0
    FUNC_LEAVE_API(ret_value)
1126
0
} /* end H5Dread_multi() */
1127
1128
/*-------------------------------------------------------------------------
1129
 * Function:    H5Dread_multi_async
1130
 *
1131
 * Purpose:     Asynchronously read dataset elements from multiple
1132
 *              datasets.
1133
 *
1134
 * Return:      Non-negative on success/Negative on failure
1135
 *
1136
 *-------------------------------------------------------------------------
1137
 */
1138
herr_t
1139
H5Dread_multi_async(const char *app_file, const char *app_func, unsigned app_line, size_t count,
1140
                    hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[],
1141
                    hid_t dxpl_id, void *buf[] /*out*/, hid_t es_id)
1142
0
{
1143
0
    H5VL_object_t *vol_obj   = NULL;            /* Dataset VOL object */
1144
0
    void          *token     = NULL;            /* Request token for async operation        */
1145
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
1146
0
    herr_t         ret_value = SUCCEED;         /* Return value */
1147
1148
0
    FUNC_ENTER_API(FAIL)
1149
1150
    /* Set up request token pointer for asynchronous operation */
1151
0
    if (H5ES_NONE != es_id)
1152
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
1153
1154
    /* Read the data */
1155
0
    if (H5D__read_api_common(count, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf,
1156
0
                             token_ptr, &vol_obj) < 0)
1157
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't asynchronously read data");
1158
1159
    /* If a token was created, add the token to the event set */
1160
0
    if (NULL != token)
1161
        /* clang-format off */
1162
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
1163
0
                        H5ARG_TRACE11(__func__, "*s*sIuz*i*i*i*ii**xi", app_file, app_func, app_line, count, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf, es_id)) < 0)
1164
            /* clang-format on */
1165
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, FAIL, "can't insert token into event set");
1166
1167
0
done:
1168
0
    FUNC_LEAVE_API(ret_value)
1169
0
} /* end H5Dread_multi_async() */
1170
1171
/*-------------------------------------------------------------------------
1172
 * Function:    H5Dread_chunk2
1173
 *
1174
 * Purpose:     Reads an entire chunk from the file directly.
1175
 *
1176
 * Return:      Non-negative on success/Negative on failure
1177
 *
1178
 *---------------------------------------------------------------------------
1179
 */
1180
herr_t
1181
H5Dread_chunk2(hid_t dset_id, hid_t dxpl_id, const hsize_t *offset, uint32_t *filters /*out*/,
1182
               void *buf /*out*/, size_t *buf_size)
1183
0
{
1184
0
    H5VL_object_t                      *vol_obj;             /* Dataset for this operation   */
1185
0
    H5VL_optional_args_t                vol_cb_args;         /* Arguments to VOL callback */
1186
0
    H5VL_native_dataset_optional_args_t dset_opt_args;       /* Arguments for optional operation */
1187
0
    herr_t                              ret_value = SUCCEED; /* Return value */
1188
1189
0
    FUNC_ENTER_API(FAIL)
1190
1191
    /* Check arguments */
1192
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
1193
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id is not a dataset ID");
1194
0
    if (!offset)
1195
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "offset cannot be NULL");
1196
0
    if (!filters)
1197
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "filters cannot be NULL");
1198
0
    if (!buf_size)
1199
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "buf_size cannot be NULL");
1200
1201
    /* Get the default dataset transfer property list if the user didn't provide one */
1202
0
    if (H5P_DEFAULT == dxpl_id)
1203
0
        dxpl_id = H5P_DATASET_XFER_DEFAULT;
1204
0
    else if (true != H5P_isa_class(dxpl_id, H5P_DATASET_XFER))
1205
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dxpl_id is not a dataset transfer property list ID");
1206
1207
    /* Set up VOL callback arguments */
1208
0
    dset_opt_args.chunk_read.offset   = offset;
1209
0
    dset_opt_args.chunk_read.filters  = 0;
1210
0
    dset_opt_args.chunk_read.buf      = buf;
1211
0
    dset_opt_args.chunk_read.buf_size = buf_size;
1212
0
    vol_cb_args.op_type               = H5VL_NATIVE_DATASET_CHUNK_READ;
1213
0
    vol_cb_args.args                  = &dset_opt_args;
1214
1215
    /* Read the raw chunk */
1216
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, dxpl_id, H5_REQUEST_NULL) < 0)
1217
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read unprocessed chunk data");
1218
1219
    /* Set return value */
1220
0
    *filters = dset_opt_args.chunk_read.filters;
1221
1222
0
done:
1223
0
    FUNC_LEAVE_API(ret_value)
1224
0
} /* end H5Dread_chunk2() */
1225
1226
/*-------------------------------------------------------------------------
1227
 * Function:    H5D__write_api_common
1228
 *
1229
 * Purpose:     Common helper routine for sync/async dataset write operations.
1230
 *
1231
 * Return:      SUCCEED/FAIL
1232
 *
1233
 *-------------------------------------------------------------------------
1234
 */
1235
static herr_t
1236
H5D__write_api_common(size_t count, hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[],
1237
                      hid_t file_space_id[], hid_t dxpl_id, const void *buf[], void **token_ptr,
1238
                      H5VL_object_t **_vol_obj_ptr)
1239
0
{
1240
0
    H5VL_object_t  *tmp_vol_obj = NULL; /* Object for loc_id */
1241
0
    H5VL_object_t **vol_obj_ptr =
1242
0
        (_vol_obj_ptr ? _vol_obj_ptr : &tmp_vol_obj); /* Ptr to object ptr for loc_id */
1243
0
    void             *obj_local;                      /* Local buffer for obj */
1244
0
    void            **obj = &obj_local;               /* Array of object pointers */
1245
0
    H5VL_connector_t *connector;                      /* VOL connector pointer */
1246
0
    size_t            i;                              /* Local index variable */
1247
0
    herr_t            ret_value = SUCCEED;            /* Return value */
1248
1249
0
    FUNC_ENTER_PACKAGE
1250
1251
    /* Check arguments */
1252
0
    if (count == 0)
1253
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "count must be greater than 0");
1254
0
    if (!dset_id)
1255
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dset_id array not provided");
1256
0
    if (!mem_type_id)
1257
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "mem_type_id array not provided");
1258
0
    if (!mem_space_id)
1259
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "mem_space_id array not provided");
1260
0
    if (!file_space_id)
1261
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "file_space_id array not provided");
1262
0
    if (!buf)
1263
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "buf array not provided");
1264
1265
    /* Allocate obj array if necessary */
1266
0
    if (count > 1)
1267
0
        if (NULL == (obj = (void **)H5MM_malloc(count * sizeof(void *))))
1268
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "can't allocate space for object array");
1269
1270
    /* Get vol_obj_ptr (return just the first dataset to caller if requested) */
1271
0
    if (NULL == (*vol_obj_ptr = (H5VL_object_t *)H5I_object_verify(dset_id[0], H5I_DATASET)))
1272
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id is not a dataset ID");
1273
1274
    /* Save the connector of the first dataset.  Unpack the connector and call
1275
     * the "direct" write function here to avoid allocating an array of count
1276
     * H5VL_object_ts. */
1277
0
    connector = H5VL_OBJ_CONNECTOR(*vol_obj_ptr);
1278
1279
    /* Build obj array */
1280
0
    obj[0] = H5VL_OBJ_DATA(*vol_obj_ptr);
1281
0
    for (i = 1; i < count; i++) {
1282
0
        htri_t cls_cmp;
1283
1284
        /* Get the object */
1285
0
        if (NULL == (tmp_vol_obj = (H5VL_object_t *)H5I_object_verify(dset_id[i], H5I_DATASET)))
1286
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id is not a dataset ID");
1287
0
        obj[i] = H5VL_OBJ_DATA(tmp_vol_obj);
1288
1289
        /* Make sure the class matches */
1290
0
        if ((cls_cmp = H5VL_conn_same_class(H5VL_OBJ_CONNECTOR(tmp_vol_obj), connector)) < 0)
1291
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTCOMPARE, FAIL, "can't compare VOL connectors");
1292
0
        if (!cls_cmp)
1293
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL,
1294
0
                        "datasets are accessed through different VOL connectors and can't be used in the "
1295
0
                        "same I/O call");
1296
0
    }
1297
1298
    /* Get the default dataset transfer property list if the user didn't provide one */
1299
0
    if (H5P_DEFAULT == dxpl_id)
1300
0
        dxpl_id = H5P_DATASET_XFER_DEFAULT;
1301
0
    else if (true != H5P_isa_class(dxpl_id, H5P_DATASET_XFER))
1302
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not xfer parms");
1303
1304
    /* Write the data */
1305
0
    if (H5VL_dataset_write(count, obj, connector, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf,
1306
0
                           token_ptr) < 0)
1307
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write data");
1308
1309
0
done:
1310
    /* Free memory */
1311
0
    if (obj != &obj_local)
1312
0
        H5MM_free(obj);
1313
1314
0
    FUNC_LEAVE_NOAPI(ret_value)
1315
0
} /* end H5D__write_api_common() */
1316
1317
/*-------------------------------------------------------------------------
1318
 * Function:    H5Dwrite
1319
 *
1320
 * Purpose:     Writes (part of) a DSET from application memory BUF to the
1321
 *              file. The part of the dataset to write is defined with the
1322
 *              MEM_SPACE_ID and FILE_SPACE_ID arguments. The data points
1323
 *              are converted from their current type (MEM_TYPE_ID) to their
1324
 *              file datatype. Additional miscellaneous data transfer
1325
 *              properties can be passed to this function with the
1326
 *              PLIST_ID argument.
1327
 *
1328
 *              The FILE_SPACE_ID can be the constant H5S_ALL which indicates
1329
 *              that the entire file dataspace is to be referenced.
1330
 *
1331
 *              The MEM_SPACE_ID can be the constant H5S_ALL in which case
1332
 *              the memory dataspace is the same as the file dataspace
1333
 *              defined when the dataset was created.  The MEM_SPACE_ID can
1334
 *              also be the constant H5S_BLOCK, which indicates that the
1335
 *              buffer provided is a single contiguous block of memory, with
1336
 *              the same # of elements as specified in the FILE_SPACE_ID
1337
 *              selection.
1338
 *
1339
 *              The number of elements in the memory dataspace must match
1340
 *              the number of elements in the file dataspace.
1341
 *
1342
 *              The PLIST_ID can be the constant H5P_DEFAULT in which
1343
 *              case the default data transfer properties are used.
1344
 *
1345
 * Return:      Non-negative on success/Negative on failure
1346
 *
1347
 *-------------------------------------------------------------------------
1348
 */
1349
herr_t
1350
H5Dwrite(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t dxpl_id,
1351
         const void *buf)
1352
0
{
1353
0
    herr_t ret_value = SUCCEED; /* Return value */
1354
1355
0
    FUNC_ENTER_API(FAIL)
1356
1357
    /* Write the data */
1358
0
    if (H5D__write_api_common(1, &dset_id, &mem_type_id, &mem_space_id, &file_space_id, dxpl_id, &buf, NULL,
1359
0
                              NULL) < 0)
1360
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't synchronously write data");
1361
1362
0
done:
1363
0
    FUNC_LEAVE_API(ret_value)
1364
0
} /* end H5Dwrite() */
1365
1366
/*-------------------------------------------------------------------------
1367
 * Function:    H5Dwrite_async
1368
 *
1369
 * Purpose:     For asynchronous VOL with request token
1370
 *
1371
 * Return:      Non-negative on success/Negative on failure
1372
 *
1373
 *-------------------------------------------------------------------------
1374
 */
1375
herr_t
1376
H5Dwrite_async(const char *app_file, const char *app_func, unsigned app_line, hid_t dset_id,
1377
               hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t dxpl_id, const void *buf,
1378
               hid_t es_id)
1379
0
{
1380
0
    H5VL_object_t *vol_obj   = NULL;            /* Dataset VOL object */
1381
0
    void          *token     = NULL;            /* Request token for async operation        */
1382
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
1383
0
    herr_t         ret_value = SUCCEED;         /* Return value */
1384
1385
0
    FUNC_ENTER_API(FAIL)
1386
1387
    /* Set up request token pointer for asynchronous operation */
1388
0
    if (H5ES_NONE != es_id)
1389
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
1390
1391
    /* Write the data */
1392
0
    if (H5D__write_api_common(1, &dset_id, &mem_type_id, &mem_space_id, &file_space_id, dxpl_id, &buf,
1393
0
                              token_ptr, &vol_obj) < 0)
1394
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't asynchronously write data");
1395
1396
    /* If a token was created, add the token to the event set */
1397
0
    if (NULL != token)
1398
        /* clang-format off */
1399
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
1400
0
                        H5ARG_TRACE10(__func__, "*s*sIuiiiii*xi", app_file, app_func, app_line, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf, es_id)) < 0)
1401
            /* clang-format on */
1402
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, FAIL, "can't insert token into event set");
1403
1404
0
done:
1405
0
    FUNC_LEAVE_API(ret_value)
1406
0
} /* end H5Dwrite_async() */
1407
1408
/*-------------------------------------------------------------------------
1409
 * Function:  H5Dwrite_multi
1410
 *
1411
 * Purpose: Multi-version of H5Dwrite(), which writes selections from
1412
 *              application memory BUFs into multiple datasets in a file.
1413
 *
1414
 * Return:  Non-negative on success/Negative on failure
1415
 *
1416
 *-------------------------------------------------------------------------
1417
 */
1418
herr_t
1419
H5Dwrite_multi(size_t count, hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[],
1420
               hid_t file_space_id[], hid_t dxpl_id, const void *buf[])
1421
0
{
1422
0
    herr_t ret_value = SUCCEED; /* Return value */
1423
1424
0
    FUNC_ENTER_API(FAIL)
1425
1426
0
    if (count == 0)
1427
0
        HGOTO_DONE(SUCCEED);
1428
1429
    /* Write the data */
1430
0
    if (H5D__write_api_common(count, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf, NULL,
1431
0
                              NULL) < 0)
1432
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't synchronously write data");
1433
1434
0
done:
1435
0
    FUNC_LEAVE_API(ret_value)
1436
0
} /* end H5Dwrite_multi() */
1437
1438
/*-------------------------------------------------------------------------
1439
 * Function:    H5Dwrite_multi_async
1440
 *
1441
 * Purpose:     Asynchronously write dataset elements to multiple
1442
 *              datasets.
1443
 *
1444
 * Return:      Non-negative on success/Negative on failure
1445
 *
1446
 *-------------------------------------------------------------------------
1447
 */
1448
herr_t
1449
H5Dwrite_multi_async(const char *app_file, const char *app_func, unsigned app_line, size_t count,
1450
                     hid_t dset_id[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[],
1451
                     hid_t dxpl_id, const void *buf[], hid_t es_id)
1452
0
{
1453
0
    H5VL_object_t *vol_obj   = NULL;            /* Dataset VOL object */
1454
0
    void          *token     = NULL;            /* Request token for async operation        */
1455
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
1456
0
    herr_t         ret_value = SUCCEED;         /* Return value */
1457
1458
0
    FUNC_ENTER_API(FAIL)
1459
1460
    /* Set up request token pointer for asynchronous operation */
1461
0
    if (H5ES_NONE != es_id)
1462
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
1463
1464
    /* Write the data */
1465
0
    if (H5D__write_api_common(count, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf,
1466
0
                              token_ptr, &vol_obj) < 0)
1467
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't asynchronously write data");
1468
1469
    /* If a token was created, add the token to the event set */
1470
0
    if (NULL != token)
1471
        /* clang-format off */
1472
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
1473
0
                        H5ARG_TRACE11(__func__, "*s*sIuz*i*i*i*ii**xi", app_file, app_func, app_line, count, dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf, es_id)) < 0)
1474
            /* clang-format on */
1475
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, FAIL, "can't insert token into event set");
1476
1477
0
done:
1478
0
    FUNC_LEAVE_API(ret_value)
1479
0
} /* end H5Dwrite_multi_async() */
1480
1481
/*-------------------------------------------------------------------------
1482
 * Function:    H5Dwrite_chunk
1483
 *
1484
 * Purpose:     Writes an entire chunk to the file directly.
1485
 *
1486
 * Return:      Non-negative on success/Negative on failure
1487
 *
1488
 *-------------------------------------------------------------------------
1489
 */
1490
herr_t
1491
H5Dwrite_chunk(hid_t dset_id, hid_t dxpl_id, uint32_t filters, const hsize_t *offset, size_t data_size,
1492
               const void *buf)
1493
0
{
1494
0
    H5VL_object_t                      *vol_obj;       /* Dataset for this operation   */
1495
0
    H5VL_optional_args_t                vol_cb_args;   /* Arguments to VOL callback */
1496
0
    H5VL_native_dataset_optional_args_t dset_opt_args; /* Arguments for optional operation */
1497
0
    uint32_t                            data_size_32;  /* Chunk data size (limited to 32-bits currently) */
1498
0
    herr_t                              ret_value = SUCCEED; /* Return value */
1499
1500
0
    FUNC_ENTER_API(FAIL)
1501
1502
    /* Check arguments */
1503
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
1504
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset ID");
1505
0
    if (!buf)
1506
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "buf cannot be NULL");
1507
0
    if (!offset)
1508
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "offset cannot be NULL");
1509
0
    if (0 == data_size)
1510
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "data_size cannot be zero");
1511
1512
    /* Make sure data size is less than 4 GiB */
1513
0
    data_size_32 = (uint32_t)data_size;
1514
0
    if (data_size != (size_t)data_size_32)
1515
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid data_size - chunks cannot be > 4 GiB");
1516
1517
    /* Get the default dataset transfer property list if the user didn't provide one */
1518
0
    if (H5P_DEFAULT == dxpl_id)
1519
0
        dxpl_id = H5P_DATASET_XFER_DEFAULT;
1520
0
    else if (true != H5P_isa_class(dxpl_id, H5P_DATASET_XFER))
1521
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dxpl_id is not a dataset transfer property list ID");
1522
1523
    /* Set up VOL callback arguments */
1524
0
    dset_opt_args.chunk_write.offset  = offset;
1525
0
    dset_opt_args.chunk_write.filters = filters;
1526
0
    dset_opt_args.chunk_write.size    = data_size_32;
1527
0
    dset_opt_args.chunk_write.buf     = buf;
1528
0
    vol_cb_args.op_type               = H5VL_NATIVE_DATASET_CHUNK_WRITE;
1529
0
    vol_cb_args.args                  = &dset_opt_args;
1530
1531
    /* Write chunk */
1532
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, dxpl_id, H5_REQUEST_NULL) < 0)
1533
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write unprocessed chunk data");
1534
1535
0
done:
1536
0
    FUNC_LEAVE_API(ret_value)
1537
0
} /* end H5Dwrite_chunk() */
1538
1539
/*-------------------------------------------------------------------------
1540
 * Function:    H5Dscatter
1541
 *
1542
 * Purpose:     Scatters data provided by the callback op to the
1543
 *              destination buffer dst_buf, where the dimensions of
1544
 *              dst_buf and the selection to be scattered to are specified
1545
 *              by the dataspace dst_space_id.  The type of the data to be
1546
 *              scattered is specified by type_id.
1547
 *
1548
 * Return:      Non-negative on success/Negative on failure
1549
 *
1550
 *-------------------------------------------------------------------------
1551
 */
1552
herr_t
1553
H5Dscatter(H5D_scatter_func_t op, void *op_data, hid_t type_id, hid_t dst_space_id, void *dst_buf /*out*/)
1554
0
{
1555
0
    H5T_t          *type;                     /* Datatype */
1556
0
    H5S_t          *dst_space;                /* Dataspace */
1557
0
    H5S_sel_iter_t *iter           = NULL;    /* Selection iteration info*/
1558
0
    bool            iter_init      = false;   /* Selection iteration info has been initialized */
1559
0
    const void     *src_buf        = NULL;    /* Source (contiguous) data buffer */
1560
0
    size_t          src_buf_nbytes = 0;       /* Size of src_buf */
1561
0
    size_t          type_size;                /* Datatype element size */
1562
0
    hssize_t        nelmts;                   /* Number of remaining elements in selection */
1563
0
    size_t          nelmts_scatter = 0;       /* Number of elements to scatter to dst_buf */
1564
0
    herr_t          ret_value      = SUCCEED; /* Return value */
1565
1566
0
    FUNC_ENTER_API(FAIL)
1567
1568
    /* Check args */
1569
0
    if (op == NULL)
1570
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid callback function pointer");
1571
0
    if (NULL == (type = (H5T_t *)H5I_object_verify(type_id, H5I_DATATYPE)))
1572
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype");
1573
0
    if (NULL == (dst_space = (H5S_t *)H5I_object_verify(dst_space_id, H5I_DATASPACE)))
1574
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace");
1575
0
    if (dst_buf == NULL)
1576
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no destination buffer provided");
1577
1578
    /* Get datatype element size */
1579
0
    if (0 == (type_size = H5T_GET_SIZE(type)))
1580
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get datatype size");
1581
1582
    /* Get number of elements in dataspace */
1583
0
    if ((nelmts = (hssize_t)H5S_GET_SELECT_NPOINTS(dst_space)) < 0)
1584
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTCOUNT, FAIL, "unable to get number of elements in selection");
1585
1586
    /* Allocate the selection iterator */
1587
0
    if (NULL == (iter = H5FL_MALLOC(H5S_sel_iter_t)))
1588
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "can't allocate selection iterator");
1589
1590
    /* Initialize selection iterator */
1591
0
    if (H5S_select_iter_init(iter, dst_space, type_size, 0) < 0)
1592
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to initialize selection iterator information");
1593
0
    iter_init = true;
1594
1595
    /* Loop until all data has been scattered */
1596
0
    while (nelmts > 0) {
1597
        /* Prepare & restore library for user callback */
1598
0
        H5_BEFORE_USER_CB(FAIL)
1599
0
            {
1600
                /* Make callback to retrieve data */
1601
0
                ret_value = op(&src_buf, &src_buf_nbytes, op_data);
1602
0
            }
1603
0
        H5_AFTER_USER_CB(FAIL)
1604
0
        if (ret_value < 0)
1605
0
            HGOTO_ERROR(H5E_DATASET, H5E_CALLBACK, FAIL, "callback operator returned failure");
1606
1607
        /* Calculate number of elements */
1608
0
        nelmts_scatter = src_buf_nbytes / type_size;
1609
1610
        /* Check callback results */
1611
0
        if (!src_buf)
1612
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "callback did not return a buffer");
1613
0
        if (src_buf_nbytes == 0)
1614
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "callback returned a buffer size of 0");
1615
0
        if (src_buf_nbytes % type_size)
1616
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "buffer size is not a multiple of datatype size");
1617
0
        if (nelmts_scatter > (size_t)nelmts)
1618
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "callback returned more elements than in selection");
1619
1620
        /* Scatter data */
1621
0
        if (H5D__scatter_mem(src_buf, iter, nelmts_scatter, dst_buf) < 0)
1622
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "scatter failed");
1623
1624
0
        nelmts -= (hssize_t)nelmts_scatter;
1625
0
    } /* end while */
1626
1627
0
done:
1628
    /* Release selection iterator */
1629
0
    if (iter_init && H5S_SELECT_ITER_RELEASE(iter) < 0)
1630
0
        HDONE_ERROR(H5E_DATASET, H5E_CANTFREE, FAIL, "can't release selection iterator");
1631
0
    if (iter)
1632
0
        iter = H5FL_FREE(H5S_sel_iter_t, iter);
1633
1634
0
    FUNC_LEAVE_API(ret_value)
1635
0
} /* H5Dscatter() */
1636
1637
/*-------------------------------------------------------------------------
1638
 * Function:    H5Dgather
1639
 *
1640
 * Purpose:     Gathers data provided from the source buffer src_buf to
1641
 *              contiguous buffer dst_buf, then calls the callback op.
1642
 *              The dimensions of src_buf and the selection to be gathered
1643
 *              are specified by the dataspace src_space_id.  The type of
1644
 *              the data to be gathered is specified by type_id.
1645
 *
1646
 * Return:      Non-negative on success/Negative on failure
1647
 *
1648
 *-------------------------------------------------------------------------
1649
 */
1650
herr_t
1651
H5Dgather(hid_t src_space_id, const void *src_buf, hid_t type_id, size_t dst_buf_size, void *dst_buf /*out*/,
1652
          H5D_gather_func_t op, void *op_data)
1653
0
{
1654
0
    H5T_t          *type;                /* Datatype */
1655
0
    H5S_t          *src_space;           /* Dataspace */
1656
0
    H5S_sel_iter_t *iter      = NULL;    /* Selection iteration info*/
1657
0
    bool            iter_init = false;   /* Selection iteration info has been initialized */
1658
0
    size_t          type_size;           /* Datatype element size */
1659
0
    hssize_t        nelmts;              /* Number of remaining elements in selection */
1660
0
    size_t          dst_buf_nelmts;      /* Number of elements that can fit in dst_buf */
1661
0
    size_t          nelmts_gathered;     /* Number of elements gathered from src_buf */
1662
0
    herr_t          ret_value = SUCCEED; /* Return value */
1663
1664
0
    FUNC_ENTER_API(FAIL)
1665
1666
    /* Check args */
1667
0
    if (NULL == (src_space = (H5S_t *)H5I_object_verify(src_space_id, H5I_DATASPACE)))
1668
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace");
1669
0
    if (src_buf == NULL)
1670
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no source buffer provided");
1671
0
    if (NULL == (type = (H5T_t *)H5I_object_verify(type_id, H5I_DATATYPE)))
1672
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype");
1673
0
    if (dst_buf_size == 0)
1674
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "destination buffer size is 0");
1675
0
    if (dst_buf == NULL)
1676
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no destination buffer provided");
1677
1678
    /* Get datatype element size */
1679
0
    if (0 == (type_size = H5T_GET_SIZE(type)))
1680
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get datatype size");
1681
1682
    /* Get number of elements in dst_buf_size */
1683
0
    dst_buf_nelmts = dst_buf_size / type_size;
1684
0
    if (dst_buf_nelmts == 0)
1685
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL,
1686
0
                    "destination buffer is not large enough to hold one element");
1687
1688
    /* Get number of elements in dataspace */
1689
0
    if ((nelmts = (hssize_t)H5S_GET_SELECT_NPOINTS(src_space)) < 0)
1690
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTCOUNT, FAIL, "unable to get number of elements in selection");
1691
1692
    /* If dst_buf is not large enough to hold all the elements, make sure there
1693
     * is a callback */
1694
0
    if (((size_t)nelmts > dst_buf_nelmts) && (op == NULL))
1695
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no callback supplied and destination buffer too small");
1696
1697
    /* Allocate the selection iterator */
1698
0
    if (NULL == (iter = H5FL_MALLOC(H5S_sel_iter_t)))
1699
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "can't allocate selection iterator");
1700
1701
    /* Initialize selection iterator */
1702
0
    if (H5S_select_iter_init(iter, src_space, type_size, 0) < 0)
1703
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to initialize selection iterator information");
1704
0
    iter_init = true;
1705
1706
    /* Loop until all data has been scattered */
1707
0
    while (nelmts > 0) {
1708
        /* Gather data */
1709
0
        if (0 ==
1710
0
            (nelmts_gathered = H5D__gather_mem(src_buf, iter, MIN(dst_buf_nelmts, (size_t)nelmts), dst_buf)))
1711
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "gather failed");
1712
0
        assert(nelmts_gathered == MIN(dst_buf_nelmts, (size_t)nelmts));
1713
1714
        /* Make callback to process dst_buf */
1715
0
        if (op) {
1716
            /* Prepare & restore library for user callback */
1717
0
            H5_BEFORE_USER_CB(FAIL)
1718
0
                {
1719
0
                    ret_value = op(dst_buf, nelmts_gathered * type_size, op_data);
1720
0
                }
1721
0
            H5_AFTER_USER_CB(FAIL)
1722
0
            if (ret_value < 0)
1723
0
                HGOTO_ERROR(H5E_DATASET, H5E_CALLBACK, FAIL, "callback operator returned failure");
1724
0
        }
1725
1726
0
        nelmts -= (hssize_t)nelmts_gathered;
1727
0
        assert(op || (nelmts == 0));
1728
0
    } /* end while */
1729
1730
0
done:
1731
    /* Release selection iterator */
1732
0
    if (iter_init && H5S_SELECT_ITER_RELEASE(iter) < 0)
1733
0
        HDONE_ERROR(H5E_DATASET, H5E_CANTFREE, FAIL, "can't release selection iterator");
1734
0
    if (iter)
1735
0
        iter = H5FL_FREE(H5S_sel_iter_t, iter);
1736
1737
0
    FUNC_LEAVE_API(ret_value)
1738
0
} /* H5Dgather() */
1739
1740
/*--------------------------------------------------------------------------
1741
 NAME
1742
    H5Dfill
1743
 PURPOSE
1744
    Fill a selection in memory with a value
1745
 USAGE
1746
    herr_t H5Dfill(fill, fill_type, space, buf, buf_type)
1747
        const void *fill;       IN: Pointer to fill value to use
1748
        hid_t fill_type_id;     IN: Datatype of the fill value
1749
        void *buf;              IN/OUT: Memory buffer to fill selection within
1750
        hid_t buf_type_id;      IN: Datatype of the elements in buffer
1751
        hid_t space_id;         IN: Dataspace describing memory buffer &
1752
                                    containing selection to use.
1753
 RETURNS
1754
    Non-negative on success/Negative on failure.
1755
 DESCRIPTION
1756
    Use the selection in the dataspace to fill elements in a memory buffer.
1757
 GLOBAL VARIABLES
1758
 COMMENTS, BUGS, ASSUMPTIONS
1759
    If "fill" parameter is NULL, use all zeros as fill value
1760
 EXAMPLES
1761
 REVISION LOG
1762
--------------------------------------------------------------------------*/
1763
herr_t
1764
H5Dfill(const void *fill, hid_t fill_type_id, void *buf, hid_t buf_type_id, hid_t space_id)
1765
0
{
1766
0
    H5S_t *space;               /* Dataspace */
1767
0
    H5T_t *fill_type;           /* Fill-value datatype */
1768
0
    H5T_t *buf_type;            /* Buffer datatype */
1769
0
    herr_t ret_value = SUCCEED; /* Return value */
1770
1771
0
    FUNC_ENTER_API(FAIL)
1772
1773
    /* Check args */
1774
0
    if (buf == NULL)
1775
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid buffer");
1776
0
    if (NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
1777
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "not a dataspace");
1778
0
    if (NULL == (fill_type = (H5T_t *)H5I_object_verify(fill_type_id, H5I_DATATYPE)))
1779
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "not a datatype");
1780
0
    if (NULL == (buf_type = (H5T_t *)H5I_object_verify(buf_type_id, H5I_DATATYPE)))
1781
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, 0, "not a datatype");
1782
1783
    /* Fill the selection in the memory buffer */
1784
0
    if (H5D__fill(fill, fill_type, buf, buf_type, space) < 0)
1785
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTENCODE, FAIL, "filling selection failed");
1786
1787
0
done:
1788
0
    FUNC_LEAVE_API(ret_value)
1789
0
} /* H5Dfill() */
1790
1791
/*-------------------------------------------------------------------------
1792
 * Function:    H5Diterate
1793
 *
1794
 * Purpose: This routine iterates over all the elements selected in a memory
1795
 *      buffer.  The callback function is called once for each element selected
1796
 *      in the dataspace.  The selection in the dataspace is modified so
1797
 *      that any elements already iterated over are removed from the selection
1798
 *      if the iteration is interrupted (by the H5D_operator_t function
1799
 *      returning non-zero) in the "middle" of the iteration and may be
1800
 *      re-started by the user where it left off.
1801
 *
1802
 *      NOTE: Until "subtracting" elements from a selection is implemented,
1803
 *          the selection is not modified.
1804
 *
1805
 * Parameters:
1806
 *      void *buf;          IN/OUT: Pointer to the buffer in memory containing
1807
 *                              the elements to iterate over.
1808
 *      hid_t type_id;      IN: Datatype ID for the elements stored in BUF.
1809
 *      hid_t space_id;     IN: Dataspace ID for BUF, also contains the
1810
 *                              selection to iterate over.
1811
 *      H5D_operator_t op; IN: Function pointer to the routine to be
1812
 *                              called for each element in BUF iterated over.
1813
 *      void *operator_data;    IN/OUT: Pointer to any user-defined data
1814
 *                              associated with the operation.
1815
 *
1816
 * Operation information:
1817
 *      H5D_operator_t is defined as:
1818
 *          typedef herr_t (*H5D_operator_t)(void *elem, hid_t type_id,
1819
 *              unsigned ndim, const hsize_t *point, void *operator_data);
1820
 *
1821
 *      H5D_operator_t parameters:
1822
 *          void *elem;         IN/OUT: Pointer to the element in memory containing
1823
 *                                  the current point.
1824
 *          hid_t type_id;      IN: Datatype ID for the elements stored in ELEM.
1825
 *          unsigned ndim;       IN: Number of dimensions for POINT array
1826
 *          const hsize_t *point; IN: Array containing the location of the element
1827
 *                                  within the original dataspace.
1828
 *          void *operator_data;    IN/OUT: Pointer to any user-defined data
1829
 *                                  associated with the operation.
1830
 *
1831
 *      The return values from an operator are:
1832
 *          Zero causes the iterator to continue, returning zero when all
1833
 *              elements have been processed.
1834
 *          Positive causes the iterator to immediately return that positive
1835
 *              value, indicating short-circuit success.  The iterator can be
1836
 *              restarted at the next element.
1837
 *          Negative causes the iterator to immediately return that value,
1838
 *              indicating failure. The iterator can be restarted at the next
1839
 *              element.
1840
 *
1841
 * Return:  Returns the return value of the last operator if it was non-zero,
1842
 *          or zero if all elements were processed. Otherwise returns a
1843
 *          negative value.
1844
 *
1845
 *-------------------------------------------------------------------------
1846
 */
1847
herr_t
1848
H5Diterate(void *buf, hid_t type_id, hid_t space_id, H5D_operator_t op, void *operator_data)
1849
0
{
1850
0
    const H5T_t      *type;      /* Datatype */
1851
0
    H5S_t            *space;     /* Dataspace for iteration */
1852
0
    H5S_sel_iter_op_t dset_op;   /* Operator for iteration */
1853
0
    herr_t            ret_value; /* Return value */
1854
1855
0
    FUNC_ENTER_API(FAIL)
1856
1857
    /* Check args */
1858
0
    if (NULL == op)
1859
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid operator");
1860
0
    if (NULL == buf)
1861
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid buffer");
1862
0
    if (H5I_DATATYPE != H5I_get_type(type_id))
1863
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid datatype");
1864
0
    if (NULL == (type = (const H5T_t *)H5I_object_verify(type_id, H5I_DATATYPE)))
1865
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an valid base datatype");
1866
0
    if (NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
1867
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataspace");
1868
0
    if (!(H5S_has_extent(space)))
1869
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dataspace does not have extent set");
1870
1871
0
    dset_op.op_type          = H5S_SEL_ITER_OP_APP;
1872
0
    dset_op.u.app_op.op      = op;
1873
0
    dset_op.u.app_op.type_id = type_id;
1874
1875
0
    ret_value = H5S_select_iterate(buf, type, space, &dset_op, operator_data);
1876
1877
0
done:
1878
0
    FUNC_LEAVE_API(ret_value)
1879
0
} /* end H5Diterate() */
1880
1881
/*-------------------------------------------------------------------------
1882
 * Function:    H5Dvlen_get_buf_size
1883
 *
1884
 * Purpose: This routine checks the number of bytes required to store the VL
1885
 *      data from the dataset, using the space_id for the selection in the
1886
 *      dataset on disk and the type_id for the memory representation of the
1887
 *      VL data, in memory.  The *size value is modified according to how many
1888
 *      bytes are required to store the VL data in memory.
1889
 *
1890
 * Return:  Non-negative on success, negative on failure
1891
 *
1892
 *-------------------------------------------------------------------------
1893
 */
1894
herr_t
1895
H5Dvlen_get_buf_size(hid_t dataset_id, hid_t type_id, hid_t space_id, hsize_t *size /*out*/)
1896
0
{
1897
0
    H5VL_object_t *vol_obj;   /* Dataset for this operation */
1898
0
    uint64_t       supported; /* Whether 'get vlen buf size' operation is supported by VOL connector */
1899
0
    herr_t         ret_value = SUCCEED; /* Return value */
1900
1901
0
    FUNC_ENTER_API(FAIL)
1902
1903
    /* Check args */
1904
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dataset_id, H5I_DATASET)))
1905
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
1906
0
    if (H5I_DATATYPE != H5I_get_type(type_id))
1907
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid datatype identifier");
1908
0
    if (H5I_DATASPACE != H5I_get_type(space_id))
1909
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataspace identifier");
1910
0
    if (size == NULL)
1911
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid 'size' pointer");
1912
1913
    /* Check if the 'get_vlen_buf_size' callback is supported */
1914
0
    supported = 0;
1915
0
    if (H5VL_introspect_opt_query(vol_obj, H5VL_SUBCLS_DATASET, H5VL_NATIVE_DATASET_GET_VLEN_BUF_SIZE,
1916
0
                                  &supported) < 0)
1917
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't check for 'get vlen buf size' operation");
1918
0
    if (supported & H5VL_OPT_QUERY_SUPPORTED) {
1919
0
        H5VL_optional_args_t                vol_cb_args;   /* Arguments to VOL callback */
1920
0
        H5VL_native_dataset_optional_args_t dset_opt_args; /* Arguments for optional operation */
1921
1922
        /* Set up VOL callback arguments */
1923
0
        dset_opt_args.get_vlen_buf_size.type_id  = type_id;
1924
0
        dset_opt_args.get_vlen_buf_size.space_id = space_id;
1925
0
        dset_opt_args.get_vlen_buf_size.size     = size;
1926
0
        vol_cb_args.op_type                      = H5VL_NATIVE_DATASET_GET_VLEN_BUF_SIZE;
1927
0
        vol_cb_args.args                         = &dset_opt_args;
1928
1929
        /* Make the 'get_vlen_buf_size' callback */
1930
0
        if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
1931
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "unable to get vlen buf size");
1932
0
    } /* end if */
1933
0
    else {
1934
        /* Perform a generic operation that will work with all VOL connectors */
1935
0
        if (H5D__vlen_get_buf_size_gen(vol_obj, type_id, space_id, size) < 0)
1936
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "unable to get vlen buf size");
1937
0
    } /* end else */
1938
1939
0
done:
1940
0
    FUNC_LEAVE_API(ret_value)
1941
0
} /* end H5Dvlen_get_buf_size() */
1942
1943
/*-------------------------------------------------------------------------
1944
 * Function:    H5D__set_extent_api_common
1945
 *
1946
 * Purpose:     This is the common function for changing a dataset's dimensions
1947
 *
1948
 * Return:      Non-negative on success, negative on failure
1949
 *
1950
 *-------------------------------------------------------------------------
1951
 */
1952
static herr_t
1953
H5D__set_extent_api_common(hid_t dset_id, const hsize_t size[], void **token_ptr,
1954
                           H5VL_object_t **_vol_obj_ptr)
1955
0
{
1956
0
    H5VL_object_t  *tmp_vol_obj = NULL; /* Object for loc_id */
1957
0
    H5VL_object_t **vol_obj_ptr =
1958
0
        (_vol_obj_ptr ? _vol_obj_ptr : &tmp_vol_obj); /* Ptr to object ptr for loc_id */
1959
0
    H5VL_dataset_specific_args_t vol_cb_args;         /* Arguments to VOL callback */
1960
0
    herr_t                       ret_value = SUCCEED; /* Return value                 */
1961
1962
0
    FUNC_ENTER_PACKAGE
1963
1964
    /* Check args */
1965
0
    if (NULL == (*vol_obj_ptr = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
1966
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
1967
0
    if (!size)
1968
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "size array cannot be NULL");
1969
1970
    /* Set up collective metadata if appropriate */
1971
0
    if (H5CX_set_loc(dset_id) < 0)
1972
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set collective metadata read info");
1973
1974
    /* Set up VOL callback arguments */
1975
0
    vol_cb_args.op_type              = H5VL_DATASET_SET_EXTENT;
1976
0
    vol_cb_args.args.set_extent.size = size;
1977
1978
    /* Set the extent */
1979
0
    if (H5VL_dataset_specific(*vol_obj_ptr, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, token_ptr) < 0)
1980
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "unable to set dataset extent");
1981
1982
0
done:
1983
0
    FUNC_LEAVE_NOAPI(ret_value)
1984
0
} /* H5D__set_extent_api_common() */
1985
1986
/*-------------------------------------------------------------------------
1987
 * Function:    H5Dset_extent
1988
 *
1989
 * Purpose:     Modifies the dimensions of a dataset.
1990
 *              Can change to a smaller dimension.
1991
 *
1992
 * Return:      Non-negative on success, negative on failure
1993
 *
1994
 *-------------------------------------------------------------------------
1995
 */
1996
herr_t
1997
H5Dset_extent(hid_t dset_id, const hsize_t size[])
1998
0
{
1999
0
    herr_t ret_value = SUCCEED; /* Return value                 */
2000
2001
0
    FUNC_ENTER_API(FAIL)
2002
2003
    /* Change a datset's dimensions synchronously */
2004
0
    if ((ret_value = H5D__set_extent_api_common(dset_id, size, NULL, NULL)) < 0)
2005
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "unable to synchronously change a dataset's dimensions");
2006
2007
0
done:
2008
0
    FUNC_LEAVE_API(ret_value)
2009
0
} /* end H5Dset_extent() */
2010
2011
/*-------------------------------------------------------------------------
2012
 * Function:    H5Dset_extent_async
2013
 *
2014
 * Purpose:     Asynchronous version of H5Dset_extent
2015
 *
2016
 * Return:      Non-negative on success, negative on failure
2017
 *
2018
 *-------------------------------------------------------------------------
2019
 */
2020
herr_t
2021
H5Dset_extent_async(const char *app_file, const char *app_func, unsigned app_line, hid_t dset_id,
2022
                    const hsize_t size[], hid_t es_id)
2023
0
{
2024
0
    H5VL_object_t *vol_obj   = NULL;            /* Object for loc_id */
2025
0
    void          *token     = NULL;            /* Request token for async operation        */
2026
0
    void         **token_ptr = H5_REQUEST_NULL; /* Pointer to request token for async operation        */
2027
0
    herr_t         ret_value = SUCCEED;         /* Return value */
2028
2029
0
    FUNC_ENTER_API(FAIL)
2030
2031
    /* Set up request token pointer for asynchronous operation */
2032
0
    if (H5ES_NONE != es_id)
2033
0
        token_ptr = &token; /* Point at token for VOL connector to set up */
2034
2035
    /* Change a datset's dimensions asynchronously */
2036
0
    if (H5D__set_extent_api_common(dset_id, size, token_ptr, &vol_obj) < 0)
2037
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "unable to asynchronously change a dataset's dimensions");
2038
2039
    /* If a token was created, add the token to the event set */
2040
0
    if (NULL != token)
2041
        /* clang-format off */
2042
0
        if (H5ES_insert(es_id, H5VL_OBJ_CONNECTOR(vol_obj), token,
2043
0
                H5ARG_TRACE6(__func__, "*s*sIui*hi", app_file, app_func, app_line, dset_id, size, es_id)) < 0)
2044
            /* clang-format on */
2045
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINSERT, FAIL, "can't insert token into event set");
2046
2047
0
done:
2048
0
    FUNC_LEAVE_API(ret_value)
2049
0
} /* H5Dset_extent_async() */
2050
2051
/*-------------------------------------------------------------------------
2052
 * Function:    H5Dflush
2053
 *
2054
 * Purpose:     Flushes all buffers associated with a dataset.
2055
 *
2056
 * Return:      Non-negative on success, negative on failure
2057
 *
2058
 *-------------------------------------------------------------------------
2059
 */
2060
herr_t
2061
H5Dflush(hid_t dset_id)
2062
0
{
2063
0
    H5VL_object_t               *vol_obj;             /* Object for loc_id */
2064
0
    H5VL_dataset_specific_args_t vol_cb_args;         /* Arguments to VOL callback */
2065
0
    herr_t                       ret_value = SUCCEED; /* Return value                 */
2066
2067
0
    FUNC_ENTER_API(FAIL)
2068
2069
    /* Check args */
2070
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2071
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id parameter is not a valid dataset identifier");
2072
2073
    /* Set up collective metadata if appropriate */
2074
0
    if (H5CX_set_loc(dset_id) < 0)
2075
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set collective metadata read info");
2076
2077
    /* Set up VOL callback arguments */
2078
0
    vol_cb_args.op_type            = H5VL_DATASET_FLUSH;
2079
0
    vol_cb_args.args.flush.dset_id = dset_id;
2080
2081
    /* Flush dataset information cached in memory
2082
     * XXX: Note that we need to pass the ID to the VOL since the H5F_flush_cb_t
2083
     *      callback needs it and that's in the public API.
2084
     */
2085
0
    if (H5VL_dataset_specific(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2086
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTFLUSH, FAIL, "unable to flush dataset");
2087
2088
0
done:
2089
0
    FUNC_LEAVE_API(ret_value)
2090
0
} /* H5Dflush */
2091
2092
/*-------------------------------------------------------------------------
2093
 * Function:    H5Drefresh
2094
 *
2095
 * Purpose:     Refreshes all buffers associated with a dataset.
2096
 *
2097
 * Return:      Non-negative on success, negative on failure
2098
 *
2099
 *-------------------------------------------------------------------------
2100
 */
2101
herr_t
2102
H5Drefresh(hid_t dset_id)
2103
0
{
2104
0
    H5VL_object_t               *vol_obj;             /* Object for loc_id */
2105
0
    H5VL_dataset_specific_args_t vol_cb_args;         /* Arguments to VOL callback */
2106
0
    herr_t                       ret_value = SUCCEED; /* Return value                 */
2107
2108
0
    FUNC_ENTER_API(FAIL)
2109
2110
    /* Check args */
2111
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2112
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id parameter is not a valid dataset identifier");
2113
2114
    /* Set up collective metadata if appropriate */
2115
0
    if (H5CX_set_loc(dset_id) < 0)
2116
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set collective metadata read info");
2117
2118
    /* Set up VOL callback arguments */
2119
0
    vol_cb_args.op_type              = H5VL_DATASET_REFRESH;
2120
0
    vol_cb_args.args.refresh.dset_id = dset_id;
2121
2122
    /* Refresh the dataset object */
2123
0
    if (H5VL_dataset_specific(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2124
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL, "unable to refresh dataset");
2125
2126
0
done:
2127
0
    FUNC_LEAVE_API(ret_value)
2128
0
} /* end H5Drefresh() */
2129
2130
/*-------------------------------------------------------------------------
2131
 * Function:    H5Dformat_convert (Internal)
2132
 *
2133
 * Purpose:     For chunked:
2134
 *                  Convert the chunk indexing type to version 1 B-tree if not
2135
 *              For compact/contiguous:
2136
 *                  Downgrade layout version to 3 if greater than 3
2137
 *              For virtual:
2138
 *                  No conversion
2139
 *
2140
 * Return:      Non-negative on success, negative on failure
2141
 *
2142
 *-------------------------------------------------------------------------
2143
 */
2144
herr_t
2145
H5Dformat_convert(hid_t dset_id)
2146
0
{
2147
0
    H5VL_object_t       *vol_obj;             /* Dataset for this operation   */
2148
0
    H5VL_optional_args_t vol_cb_args;         /* Arguments to VOL callback */
2149
0
    herr_t               ret_value = SUCCEED; /* Return value                 */
2150
2151
0
    FUNC_ENTER_API(FAIL)
2152
2153
    /* Check args */
2154
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2155
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id parameter is not a valid dataset identifier");
2156
2157
    /* Set up collective metadata if appropriate */
2158
0
    if (H5CX_set_loc(dset_id) < 0)
2159
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "can't set collective metadata read info");
2160
2161
    /* Set up VOL callback arguments */
2162
0
    vol_cb_args.op_type = H5VL_NATIVE_DATASET_FORMAT_CONVERT;
2163
0
    vol_cb_args.args    = NULL;
2164
2165
    /* Convert the dataset */
2166
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2167
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTUPDATE, FAIL, "can't convert dataset format");
2168
2169
0
done:
2170
0
    FUNC_LEAVE_API(ret_value)
2171
0
} /* H5Dformat_convert */
2172
2173
/*-------------------------------------------------------------------------
2174
 * Function:    H5Dget_chunk_index_type (Internal)
2175
 *
2176
 * Purpose:     Retrieve a dataset's chunk indexing type
2177
 *
2178
 * Return:      Non-negative on success, negative on failure
2179
 *
2180
 *-------------------------------------------------------------------------
2181
 */
2182
herr_t
2183
H5Dget_chunk_index_type(hid_t dset_id, H5D_chunk_index_t *idx_type /*out*/)
2184
0
{
2185
0
    H5VL_object_t                      *vol_obj;             /* Dataset for this operation   */
2186
0
    H5VL_optional_args_t                vol_cb_args;         /* Arguments to VOL callback */
2187
0
    H5VL_native_dataset_optional_args_t dset_opt_args;       /* Arguments for optional operation */
2188
0
    herr_t                              ret_value = SUCCEED; /* Return value                 */
2189
2190
0
    FUNC_ENTER_API(FAIL)
2191
2192
    /* Check args */
2193
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2194
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id parameter is not a valid dataset identifier");
2195
0
    if (NULL == idx_type)
2196
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "idx_type parameter cannot be NULL");
2197
2198
    /* Set up VOL callback arguments */
2199
0
    dset_opt_args.get_chunk_idx_type.idx_type = idx_type;
2200
0
    vol_cb_args.op_type                       = H5VL_NATIVE_DATASET_GET_CHUNK_INDEX_TYPE;
2201
0
    vol_cb_args.args                          = &dset_opt_args;
2202
2203
    /* Get the chunk indexing type */
2204
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2205
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk index type");
2206
2207
0
done:
2208
0
    FUNC_LEAVE_API(ret_value)
2209
0
} /* H5Dget_chunk_index_type() */
2210
2211
/*-------------------------------------------------------------------------
2212
 * Function:    H5Dget_chunk_storage_size
2213
 *
2214
 * Purpose:     Returns the size of an allocated chunk.
2215
 *
2216
 *              Intended for use with the H5D(O)read_chunk API call so
2217
 *              the caller can construct an appropriate buffer.
2218
 *
2219
 * Return:  Non-negative on success, negative on failure
2220
 *
2221
 *-------------------------------------------------------------------------
2222
 */
2223
herr_t
2224
H5Dget_chunk_storage_size(hid_t dset_id, const hsize_t *offset, hsize_t *chunk_nbytes /*out*/)
2225
0
{
2226
0
    H5VL_object_t                      *vol_obj;             /* Dataset for this operation   */
2227
0
    H5VL_optional_args_t                vol_cb_args;         /* Arguments to VOL callback */
2228
0
    H5VL_native_dataset_optional_args_t dset_opt_args;       /* Arguments for optional operation */
2229
0
    herr_t                              ret_value = SUCCEED; /* Return value                 */
2230
2231
0
    FUNC_ENTER_API(FAIL)
2232
2233
    /* Check arguments */
2234
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2235
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dset_id parameter is not a valid dataset identifier");
2236
0
    if (NULL == offset)
2237
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "offset parameter cannot be NULL");
2238
0
    if (NULL == chunk_nbytes)
2239
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "chunk_nbytes parameter cannot be NULL");
2240
2241
    /* Set up VOL callback arguments */
2242
0
    dset_opt_args.get_chunk_storage_size.offset = offset;
2243
0
    dset_opt_args.get_chunk_storage_size.size   = chunk_nbytes;
2244
0
    vol_cb_args.op_type                         = H5VL_NATIVE_DATASET_GET_CHUNK_STORAGE_SIZE;
2245
0
    vol_cb_args.args                            = &dset_opt_args;
2246
2247
    /* Get the dataset creation property list */
2248
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2249
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get storage size of chunk");
2250
2251
0
done:
2252
0
    FUNC_LEAVE_API(ret_value)
2253
0
} /* H5Dget_chunk_storage_size() */
2254
2255
/*-------------------------------------------------------------------------
2256
 * Function:    H5Dget_num_chunks
2257
 *
2258
 * Purpose:     Retrieves the number of chunks that have non-empty intersection
2259
 *              with a specified selection.
2260
 *
2261
 * Note:        Currently, this function only gets the number of all written
2262
 *              chunks, regardless the dataspace.
2263
 *
2264
 * Parameters:
2265
 *              hid_t dset_id;      IN: Chunked dataset ID
2266
 *              hid_t fspace_id;    IN: File dataspace ID
2267
 *              hsize_t *nchunks;   OUT: Number of non-empty chunks
2268
 *
2269
 * Return:      Non-negative on success, negative on failure
2270
 *
2271
 *-------------------------------------------------------------------------
2272
 */
2273
herr_t
2274
H5Dget_num_chunks(hid_t dset_id, hid_t fspace_id, hsize_t *nchunks /*out*/)
2275
0
{
2276
0
    H5VL_object_t                      *vol_obj = NULL; /* Dataset for this operation */
2277
0
    H5VL_optional_args_t                vol_cb_args;    /* Arguments to VOL callback */
2278
0
    H5VL_native_dataset_optional_args_t dset_opt_args;  /* Arguments for optional operation */
2279
0
    herr_t                              ret_value = SUCCEED;
2280
2281
0
    FUNC_ENTER_API(FAIL)
2282
2283
    /* Check arguments */
2284
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2285
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
2286
0
    if (NULL == nchunks)
2287
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid argument (null)");
2288
2289
    /* Set up VOL callback arguments */
2290
0
    dset_opt_args.get_num_chunks.space_id = fspace_id;
2291
0
    dset_opt_args.get_num_chunks.nchunks  = nchunks;
2292
0
    vol_cb_args.op_type                   = H5VL_NATIVE_DATASET_GET_NUM_CHUNKS;
2293
0
    vol_cb_args.args                      = &dset_opt_args;
2294
2295
    /* Get the number of written chunks */
2296
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2297
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get number of chunks");
2298
2299
0
done:
2300
0
    FUNC_LEAVE_API(ret_value)
2301
0
} /* H5Dget_num_chunks() */
2302
2303
/*-------------------------------------------------------------------------
2304
 * Function:    H5Dget_chunk_info
2305
 *
2306
 * Purpose:     Retrieves information about a chunk specified by its index.
2307
 *
2308
 * Parameters:
2309
 *              hid_t dset_id;          IN: Chunked dataset ID
2310
 *              hid_t fspace_id;        IN: File dataspace ID
2311
 *              hsize_t index;          IN: Index of written chunk
2312
 *              hsize_t *offset         OUT: Logical position of the chunk's
2313
 *                                           first element in the dataspace
2314
 *              unsigned *filter_mask   OUT: Mask for identifying the filters in use
2315
 *              haddr_t *addr           OUT: Address of the chunk
2316
 *              hsize_t *size           OUT: Size of the chunk
2317
 *
2318
 * Return:      Non-negative on success, negative on failure
2319
 *
2320
 *-------------------------------------------------------------------------
2321
 */
2322
herr_t
2323
H5Dget_chunk_info(hid_t dset_id, hid_t fspace_id, hsize_t chk_index, hsize_t *offset /*out*/,
2324
                  unsigned *filter_mask /*out*/, haddr_t *addr /*out*/, hsize_t *size /*out*/)
2325
0
{
2326
0
    H5VL_object_t                      *vol_obj = NULL; /* Dataset for this operation */
2327
0
    H5VL_optional_args_t                vol_cb_args;    /* Arguments to VOL callback */
2328
0
    H5VL_native_dataset_optional_args_t dset_opt_args;  /* Arguments for optional operation */
2329
0
    hsize_t                             nchunks   = 0;  /* Number of chunks */
2330
0
    herr_t                              ret_value = SUCCEED;
2331
2332
0
    FUNC_ENTER_API(FAIL)
2333
2334
    /* Check arguments */
2335
0
    if (NULL == offset && NULL == filter_mask && NULL == addr && NULL == size)
2336
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL,
2337
0
                    "invalid arguments, must have at least one non-null output argument");
2338
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2339
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
2340
2341
    /* Set up VOL callback arguments */
2342
0
    dset_opt_args.get_num_chunks.space_id = fspace_id;
2343
0
    dset_opt_args.get_num_chunks.nchunks  = &nchunks;
2344
0
    vol_cb_args.op_type                   = H5VL_NATIVE_DATASET_GET_NUM_CHUNKS;
2345
0
    vol_cb_args.args                      = &dset_opt_args;
2346
2347
    /* Get the number of written chunks to check range */
2348
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2349
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get number of chunks");
2350
2351
    /* Check range for chunk index */
2352
0
    if (chk_index >= nchunks)
2353
0
        HGOTO_ERROR(H5E_DATASET, H5E_BADRANGE, FAIL, "chunk index is out of range");
2354
2355
    /* Set up VOL callback arguments */
2356
0
    dset_opt_args.get_chunk_info_by_idx.space_id    = fspace_id;
2357
0
    dset_opt_args.get_chunk_info_by_idx.chk_index   = chk_index;
2358
0
    dset_opt_args.get_chunk_info_by_idx.offset      = offset;
2359
0
    dset_opt_args.get_chunk_info_by_idx.filter_mask = filter_mask;
2360
0
    dset_opt_args.get_chunk_info_by_idx.addr        = addr;
2361
0
    dset_opt_args.get_chunk_info_by_idx.size        = size;
2362
0
    vol_cb_args.op_type                             = H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_IDX;
2363
0
    vol_cb_args.args                                = &dset_opt_args;
2364
2365
    /* Call private function to get the chunk info given the chunk's index */
2366
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2367
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk info by index");
2368
2369
0
done:
2370
0
    FUNC_LEAVE_API(ret_value)
2371
0
} /* H5Dget_chunk_info() */
2372
2373
/*-------------------------------------------------------------------------
2374
 * Function:    H5Dget_chunk_info_by_coord
2375
 *
2376
 * Purpose:     Retrieves information about a chunk specified by its logical
2377
 *              coordinates.
2378
 *
2379
 * Parameters:
2380
 *              hid_t dset_id;          IN: Chunked dataset ID
2381
 *              hsize_t *offset         IN: Logical position of the chunk's
2382
 *                                           first element in the dataspace
2383
 *              unsigned *filter_mask   OUT: Mask for identifying the filters in use
2384
 *              haddr_t *addr           OUT: Address of the chunk
2385
 *              hsize_t *size           OUT: Size of the chunk
2386
 *
2387
 * Return:      Non-negative on success, negative on failure
2388
 *
2389
 *-------------------------------------------------------------------------
2390
 */
2391
herr_t
2392
H5Dget_chunk_info_by_coord(hid_t dset_id, const hsize_t *offset, unsigned *filter_mask /*out*/,
2393
                           haddr_t *addr /*out*/, hsize_t *size /*out*/)
2394
0
{
2395
0
    H5VL_object_t                      *vol_obj = NULL; /* Dataset for this operation */
2396
0
    H5VL_optional_args_t                vol_cb_args;    /* Arguments to VOL callback */
2397
0
    H5VL_native_dataset_optional_args_t dset_opt_args;  /* Arguments for optional operation */
2398
0
    herr_t                              ret_value = SUCCEED;
2399
2400
0
    FUNC_ENTER_API(FAIL)
2401
2402
    /* Check arguments */
2403
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2404
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
2405
0
    if (NULL == filter_mask && NULL == addr && NULL == size)
2406
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL,
2407
0
                    "invalid arguments, must have at least one non-null output argument");
2408
0
    if (NULL == offset)
2409
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid argument (null)");
2410
2411
    /* Set up VOL callback arguments */
2412
0
    dset_opt_args.get_chunk_info_by_coord.offset      = offset;
2413
0
    dset_opt_args.get_chunk_info_by_coord.filter_mask = filter_mask;
2414
0
    dset_opt_args.get_chunk_info_by_coord.addr        = addr;
2415
0
    dset_opt_args.get_chunk_info_by_coord.size        = size;
2416
0
    vol_cb_args.op_type                               = H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_COORD;
2417
0
    vol_cb_args.args                                  = &dset_opt_args;
2418
2419
    /* Call private function to get the chunk info given the chunk's index */
2420
0
    if (H5VL_dataset_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
2421
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk info by its logical coordinates");
2422
2423
0
done:
2424
0
    FUNC_LEAVE_API(ret_value)
2425
0
} /* end H5Dget_chunk_info_by_coord() */
2426
2427
/*-------------------------------------------------------------------------
2428
 * Function:    H5Dchunk_iter
2429
 *
2430
 * Purpose:     Iterates over all chunks in dataset with given callback and user data.
2431
 *
2432
 * Parameters:
2433
 *              hid_t dset_id;          IN: Chunked dataset ID
2434
 *              hid_t dxpl_id;          IN: Dataset transfer property list ID
2435
 *              H5D_chunk_iter_op_t cb  IN: User callback function, called for every chunk.
2436
 *              void *op_data           IN/OUT: Optional user data passed on to user callback.
2437
 *
2438
 * Return:      Non-negative on success, negative on failure
2439
 *
2440
 *-------------------------------------------------------------------------
2441
 */
2442
herr_t
2443
H5Dchunk_iter(hid_t dset_id, hid_t dxpl_id, H5D_chunk_iter_op_t op, void *op_data)
2444
0
{
2445
0
    H5VL_object_t                      *vol_obj = NULL; /* Dataset for this operation */
2446
0
    H5VL_optional_args_t                vol_cb_args;    /* Arguments to VOL callback */
2447
0
    H5VL_native_dataset_optional_args_t dset_opt_args;  /* Arguments for optional operation */
2448
0
    herr_t                              ret_value = SUCCEED;
2449
2450
0
    FUNC_ENTER_API(FAIL)
2451
2452
    /* Check arguments */
2453
0
    if (NULL == (vol_obj = H5VL_vol_object_verify(dset_id, H5I_DATASET)))
2454
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier");
2455
0
    if (NULL == op)
2456
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid callback to chunk iteration");
2457
2458
    /* Get the default dataset transfer property list if the user didn't provide one */
2459
0
    if (H5P_DEFAULT == dxpl_id)
2460
0
        dxpl_id = H5P_DATASET_XFER_DEFAULT;
2461
0
    else if (true != H5P_isa_class(dxpl_id, H5P_DATASET_XFER))
2462
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dxpl_id is not a dataset transfer property list ID");
2463
2464
    /* Set up VOL callback arguments */
2465
0
    dset_opt_args.chunk_iter.op      = op;
2466
0
    dset_opt_args.chunk_iter.op_data = op_data;
2467
0
    vol_cb_args.op_type              = H5VL_NATIVE_DATASET_CHUNK_ITER;
2468
0
    vol_cb_args.args                 = &dset_opt_args;
2469
2470
    /* Iterate over the chunks */
2471
0
    if ((ret_value = H5VL_dataset_optional(vol_obj, &vol_cb_args, dxpl_id, H5_REQUEST_NULL)) < 0)
2472
0
        HERROR(H5E_DATASET, H5E_BADITER, "error iterating over dataset chunks");
2473
2474
0
done:
2475
0
    FUNC_LEAVE_API(ret_value)
2476
0
} /* end H5Dchunk_iter() */