Coverage Report

Created: 2026-01-16 06:15

next uncovered line (L), next uncovered region (R), next uncovered branch (B)
/src/hdf5/src/H5VLnative_dataset.c
Line
Count
Source
1
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
2
 * Copyright by The HDF Group.                                               *
3
 * All rights reserved.                                                      *
4
 *                                                                           *
5
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
6
 * terms governing use, modification, and redistribution, is contained in    *
7
 * the LICENSE file, which can be found at the root of the source code       *
8
 * distribution tree, or in https://www.hdfgroup.org/licenses.               *
9
 * If you do not have access to either file, you may request a copy from     *
10
 * help@hdfgroup.org.                                                        *
11
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
12
13
/*
14
 * Purpose:     Dataset callbacks for the native VOL connector
15
 *
16
 */
17
18
/****************/
19
/* Module Setup */
20
/****************/
21
22
#define H5D_FRIEND /* Suppress error about including H5Dpkg    */
23
24
/***********/
25
/* Headers */
26
/***********/
27
#include "H5private.h"   /* Generic Functions                        */
28
#include "H5CXprivate.h" /* API Contexts                             */
29
#include "H5Dpkg.h"      /* Datasets                                 */
30
#include "H5Eprivate.h"  /* Error handling                           */
31
#include "H5Fprivate.h"  /* Files                                    */
32
#include "H5Gprivate.h"  /* Groups                                   */
33
#include "H5Iprivate.h"  /* IDs                                      */
34
#include "H5MMprivate.h" /* Memory management                        */
35
#include "H5Pprivate.h"  /* Property lists                           */
36
#include "H5Sprivate.h"  /* Dataspaces                               */
37
#include "H5VLprivate.h" /* Virtual Object Layer                     */
38
39
#include "H5VLnative_private.h" /* Native VOL connector                     */
40
41
/****************/
42
/* Local Macros */
43
/****************/
44
45
/******************/
46
/* Local Typedefs */
47
/******************/
48
49
/********************/
50
/* Local Prototypes */
51
/********************/
52
53
/* Helper routines for read/write API calls */
54
static herr_t H5VL__native_dataset_io_setup(size_t count, void *obj[], hid_t mem_type_id[],
55
                                            hid_t mem_space_id[], hid_t file_space_id[], hid_t dxpl_id,
56
                                            H5_flexible_const_ptr_t buf[], H5D_dset_io_info_t *dinfo);
57
static herr_t H5VL__native_dataset_io_cleanup(size_t count, hid_t mem_space_id[], hid_t file_space_id[],
58
                                              H5D_dset_io_info_t *dinfo);
59
60
/*********************/
61
/* Package Variables */
62
/*********************/
63
64
/*****************************/
65
/* Library Private Variables */
66
/*****************************/
67
68
/*******************/
69
/* Local Variables */
70
/*******************/
71
72
/*-------------------------------------------------------------------------
73
 * Function:    H5VL__native_dataset_io_setup
74
 *
75
 * Purpose:     Set up file and memory dataspaces for dataset I/O operation
76
 *
77
 * Return:      SUCCEED/FAIL
78
 *
79
 *-------------------------------------------------------------------------
80
 */
81
static herr_t
82
H5VL__native_dataset_io_setup(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[],
83
                              hid_t file_space_id[], hid_t dxpl_id, H5_flexible_const_ptr_t buf[],
84
                              H5D_dset_io_info_t *dinfo)
85
0
{
86
0
    H5F_shared_t *f_sh;
87
0
    size_t        i;
88
0
    herr_t        ret_value = SUCCEED; /* Return value */
89
90
0
    FUNC_ENTER_PACKAGE
91
92
    /* Sanity checks */
93
0
    assert(dinfo);
94
95
    /* Get shared file */
96
0
    f_sh = H5F_SHARED(((H5D_t *)obj[0])->oloc.file);
97
98
    /* Iterate over datasets */
99
0
    for (i = 0; i < count; i++) {
100
        /* Initialize fields not set here to prevent use of uninitialized */
101
0
        memset(&dinfo[i].layout_ops, 0, sizeof(dinfo[i].layout_ops));
102
0
        memset(&dinfo[i].io_ops, 0, sizeof(dinfo[i].io_ops));
103
0
        memset(&dinfo[i].layout_io_info, 0, sizeof(dinfo[i].layout_io_info));
104
0
        memset(&dinfo[i].type_info, 0, sizeof(dinfo[i].type_info));
105
0
        dinfo[i].store   = NULL;
106
0
        dinfo[i].layout  = NULL;
107
0
        dinfo[i].nelmts  = 0;
108
0
        dinfo[i].skip_io = false;
109
110
        /* Set up dset */
111
0
        dinfo[i].dset = (H5D_t *)obj[i];
112
0
        assert(dinfo[i].dset);
113
114
        /* Check dataset's file pointer is valid */
115
0
        if (NULL == dinfo[i].dset->oloc.file)
116
0
            HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dataset is not associated with a file");
117
0
        if (f_sh != H5F_SHARED(dinfo[i].dset->oloc.file))
118
0
            HGOTO_ERROR(H5E_ARGS, H5E_UNSUPPORTED, FAIL,
119
0
                        "different files detected in multi dataset I/O request");
120
121
        /* Set up memory type */
122
0
        if (NULL == (dinfo[i].mem_type = (const H5T_t *)H5I_object_verify(mem_type_id[i], H5I_DATATYPE)))
123
0
            HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "invalid datatype");
124
125
        /* Set up file dataspace */
126
0
        if (H5S_ALL == file_space_id[i])
127
            /* Use dataspace for dataset */
128
0
            dinfo[i].file_space = dinfo[i].dset->shared->space;
129
0
        else if (H5S_BLOCK == file_space_id[i])
130
0
            HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "H5S_BLOCK is not allowed for file dataspace");
131
0
        else if (H5S_PLIST == file_space_id[i]) {
132
0
            H5P_genplist_t *plist; /* Property list pointer */
133
0
            H5S_t          *space; /* Dataspace to hold selection */
134
135
            /* Get the plist structure */
136
0
            if (NULL == (plist = H5P_object_verify(dxpl_id, H5P_DATASET_XFER, true)))
137
0
                HGOTO_ERROR(H5E_DATASET, H5E_BADID, FAIL, "bad dataset transfer property list");
138
139
            /* Get a pointer to the file space in the property list */
140
0
            if (H5P_peek(plist, H5D_XFER_DSET_IO_SEL_NAME, &space) < 0)
141
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "error getting dataset I/O selection");
142
143
            /* Use dataspace for dataset */
144
0
            dinfo[i].file_space = dinfo[i].dset->shared->space;
145
146
            /* Copy, but share, selection from property list to dataset's dataspace */
147
0
            if (H5S_SELECT_COPY(dinfo[i].file_space, space, true) < 0)
148
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "can't copy dataset I/O selection");
149
0
        } /* end else-if */
150
0
        else {
151
            /* Get the dataspace pointer */
152
0
            if (NULL == (dinfo[i].file_space = (H5S_t *)H5I_object_verify(file_space_id[i], H5I_DATASPACE)))
153
0
                HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "file_space_id is not a dataspace ID");
154
0
        } /* end else */
155
156
        /* Get dataspace for memory buffer */
157
0
        if (H5S_ALL == mem_space_id[i])
158
0
            dinfo[i].mem_space = dinfo[i].file_space;
159
0
        else if (H5S_BLOCK == mem_space_id[i]) {
160
0
            hsize_t nelmts; /* # of selected elements in file */
161
162
            /* Get the # of elements selected */
163
0
            nelmts = H5S_GET_SELECT_NPOINTS(dinfo[i].file_space);
164
165
            /* Check for any elements */
166
0
            if (nelmts > 0) {
167
                /* Create a 1-D dataspace of the same # of elements */
168
0
                if (NULL == (dinfo[i].mem_space = H5S_create_simple(1, &nelmts, NULL)))
169
0
                    HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, FAIL,
170
0
                                "unable to create simple memory dataspace");
171
0
            } /* end if */
172
0
            else {
173
                /* Create a NULL dataspace of the same # of elements */
174
0
                if (NULL == (dinfo[i].mem_space = H5S_create(H5S_NULL)))
175
0
                    HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, FAIL, "unable to create NULL memory dataspace");
176
0
            } /* end else */
177
0
        }     /* end if */
178
0
        else if (H5S_PLIST == mem_space_id[i])
179
0
            HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "H5S_PLIST is not allowed for memory dataspace");
180
0
        else {
181
            /* Get the dataspace pointer */
182
0
            if (NULL == (dinfo[i].mem_space = (H5S_t *)H5I_object_verify(mem_space_id[i], H5I_DATASPACE)))
183
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "mem_space_id is not a dataspace ID");
184
0
        } /* end else */
185
186
        /* Check for valid selections */
187
0
        if (H5S_SELECT_VALID(dinfo[i].file_space) != true)
188
0
            HGOTO_ERROR(H5E_DATASPACE, H5E_BADRANGE, FAIL,
189
0
                        "selection + offset not within extent for file dataspace");
190
0
        if (H5S_SELECT_VALID(dinfo[i].mem_space) != true)
191
0
            HGOTO_ERROR(H5E_DATASPACE, H5E_BADRANGE, FAIL,
192
0
                        "selection + offset not within extent for memory dataspace");
193
194
        /* Set up buf */
195
0
        dinfo[i].buf = buf[i];
196
0
    }
197
198
0
done:
199
0
    FUNC_LEAVE_NOAPI(ret_value)
200
0
} /* end H5VL__native_dataset_io_setup() */
201
202
/*-------------------------------------------------------------------------
203
 * Function:    H5VL__native_dataset_io_cleanup
204
 *
205
 * Purpose:     Frees memory allocated by H5VL__native_dataset_io_setup()
206
 *
207
 * Return:      SUCCEED/FAIL
208
 *
209
 *-------------------------------------------------------------------------
210
 */
211
static herr_t
212
H5VL__native_dataset_io_cleanup(size_t count, hid_t mem_space_id[], hid_t file_space_id[],
213
                                H5D_dset_io_info_t *dinfo)
214
0
{
215
0
    size_t i;
216
0
    herr_t ret_value = SUCCEED; /* Return value */
217
218
0
    FUNC_ENTER_PACKAGE
219
220
    /* Sanity checks */
221
0
    assert(dinfo);
222
223
    /* Iterate over datasets */
224
0
    for (i = 0; i < count; i++) {
225
        /* Free memory dataspace if it was created.  Use HDONE_ERROR in this function so we always
226
         * try to free everything we can. */
227
0
        if (H5S_BLOCK == mem_space_id[i] && dinfo[i].mem_space)
228
0
            if (H5S_close(dinfo[i].mem_space) < 0)
229
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL,
230
0
                            "unable to release temporary memory dataspace for H5S_BLOCK");
231
232
        /* Reset file dataspace selection if it was copied from the property list */
233
0
        if (H5S_PLIST == file_space_id[i] && dinfo[i].file_space)
234
0
            if (H5S_select_all(dinfo[i].file_space, true) < 0)
235
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL,
236
0
                            "unable to release file dataspace selection for H5S_PLIST");
237
0
    }
238
239
0
    FUNC_LEAVE_NOAPI(ret_value)
240
0
} /* end H5VL__native_dataset_io_cleanup() */
241
242
/*-------------------------------------------------------------------------
243
 * Function:    H5VL__native_dataset_create
244
 *
245
 * Purpose:     Handles the dataset create callback
246
 *
247
 * Return:      Success:    dataset pointer
248
 *              Failure:    NULL
249
 *
250
 *-------------------------------------------------------------------------
251
 */
252
void *
253
H5VL__native_dataset_create(void *obj, const H5VL_loc_params_t *loc_params, const char *name, hid_t lcpl_id,
254
                            hid_t type_id, hid_t space_id, hid_t dcpl_id, hid_t dapl_id,
255
                            hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req)
256
0
{
257
0
    H5G_loc_t    loc;         /* Object location to insert dataset into */
258
0
    H5D_t       *dset = NULL; /* New dataset's info */
259
0
    const H5S_t *space;       /* Dataspace for dataset */
260
0
    void        *ret_value;
261
262
0
    FUNC_ENTER_PACKAGE
263
264
    /* Check arguments */
265
0
    if (H5G_loc_real(obj, loc_params->obj_type, &loc) < 0)
266
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a file or file object");
267
0
    if (H5I_DATATYPE != H5I_get_type(type_id))
268
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a datatype ID");
269
0
    if (NULL == (space = (const H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
270
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a dataspace ID");
271
272
    /* H5Dcreate_anon */
273
0
    if (NULL == name) {
274
        /* build and open the new dataset */
275
0
        if (NULL == (dset = H5D__create(loc.oloc->file, type_id, space, dcpl_id, dapl_id)))
276
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, NULL, "unable to create dataset");
277
0
    } /* end if */
278
    /* H5Dcreate2 */
279
0
    else {
280
        /* Create the new dataset & get its ID */
281
0
        if (NULL == (dset = H5D__create_named(&loc, name, type_id, space, lcpl_id, dcpl_id, dapl_id)))
282
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, NULL, "unable to create dataset");
283
0
    } /* end else */
284
285
0
    ret_value = (void *)dset;
286
287
0
done:
288
0
    if (NULL == name) {
289
        /* Release the dataset's object header, if it was created */
290
0
        if (dset) {
291
0
            H5O_loc_t *oloc; /* Object location for dataset */
292
293
            /* Get the new dataset's object location */
294
0
            if (NULL == (oloc = H5D_oloc(dset)))
295
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTGET, NULL, "unable to get object location of dataset");
296
297
            /* Decrement refcount on dataset's object header in memory */
298
0
            if (H5O_dec_rc_by_loc(oloc) < 0)
299
0
                HDONE_ERROR(H5E_DATASET, H5E_CANTDEC, NULL,
300
0
                            "unable to decrement refcount on newly created object");
301
0
        } /* end if */
302
0
    }     /* end if */
303
304
0
    FUNC_LEAVE_NOAPI(ret_value)
305
0
} /* end H5VL__native_dataset_create() */
306
307
/*-------------------------------------------------------------------------
308
 * Function:    H5VL__native_dataset_open
309
 *
310
 * Purpose:     Handles the dataset open callback
311
 *
312
 * Return:      Success:    dataset pointer
313
 *              Failure:    NULL
314
 *
315
 *-------------------------------------------------------------------------
316
 */
317
void *
318
H5VL__native_dataset_open(void *obj, const H5VL_loc_params_t *loc_params, const char *name, hid_t dapl_id,
319
                          hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req)
320
1
{
321
1
    H5D_t    *dset = NULL;
322
1
    H5G_loc_t loc; /* Object location of group */
323
1
    void     *ret_value = NULL;
324
325
1
    FUNC_ENTER_PACKAGE
326
327
1
    if (H5G_loc_real(obj, loc_params->obj_type, &loc) < 0)
328
0
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a file or file object");
329
330
    /* Open the dataset */
331
1
    if (NULL == (dset = H5D__open_name(&loc, name, dapl_id)))
332
1
        HGOTO_ERROR(H5E_DATASET, H5E_CANTOPENOBJ, NULL, "unable to open dataset");
333
334
0
    ret_value = (void *)dset;
335
336
1
done:
337
1
    FUNC_LEAVE_NOAPI(ret_value)
338
1
} /* end H5VL__native_dataset_open() */
339
340
/*-------------------------------------------------------------------------
341
 * Function:    H5VL__native_dataset_read
342
 *
343
 * Purpose:     Handles the dataset read callback
344
 *
345
 * Return:      SUCCEED/FAIL
346
 *
347
 *-------------------------------------------------------------------------
348
 */
349
herr_t
350
H5VL__native_dataset_read(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[],
351
                          hid_t file_space_id[], hid_t dxpl_id, void *buf[], void H5_ATTR_UNUSED **req)
352
0
{
353
0
    H5D_dset_io_info_t  dinfo_local;
354
0
    H5D_dset_io_info_t *dinfo     = &dinfo_local;
355
0
    herr_t              ret_value = SUCCEED; /* Return value */
356
357
0
    FUNC_ENTER_PACKAGE
358
359
    /* Allocate dataset info array if necessary */
360
0
    if (count > 1)
361
0
        if (NULL == (dinfo = (H5D_dset_io_info_t *)H5MM_malloc(count * sizeof(H5D_dset_io_info_t))))
362
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate dset info array buffer");
363
364
    /* Get file & memory dataspaces */
365
0
    if (H5VL__native_dataset_io_setup(count, obj, mem_type_id, mem_space_id, file_space_id, dxpl_id,
366
0
                                      (H5_flexible_const_ptr_t *)buf, dinfo) < 0)
367
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to set up file and memory dataspaces");
368
369
    /* Set DXPL for operation */
370
0
    H5CX_set_dxpl(dxpl_id);
371
372
    /* Read raw data.  Call H5D__read directly in single dset case. */
373
0
    if (H5D__read(count, dinfo) < 0)
374
0
        HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read data");
375
376
0
done:
377
    /* Clean up */
378
0
    if (H5VL__native_dataset_io_cleanup(count, mem_space_id, file_space_id, dinfo) < 0)
379
0
        HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL, "unable to release dataset info");
380
381
0
    if (dinfo != &dinfo_local)
382
0
        H5MM_xfree(dinfo);
383
384
0
    FUNC_LEAVE_NOAPI(ret_value)
385
0
} /* end H5VL__native_dataset_read() */
386
387
/*-------------------------------------------------------------------------
388
 * Function:    H5VL__native_dataset_write
389
 *
390
 * Purpose:     Handles the dataset write callback
391
 *
392
 * Return:      SUCCEED/FAIL
393
 *
394
 *-------------------------------------------------------------------------
395
 */
396
herr_t
397
H5VL__native_dataset_write(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[],
398
                           hid_t file_space_id[], hid_t dxpl_id, const void *buf[], void H5_ATTR_UNUSED **req)
399
0
{
400
0
    H5D_dset_io_info_t  dinfo_local;
401
0
    H5D_dset_io_info_t *dinfo     = &dinfo_local;
402
0
    herr_t              ret_value = SUCCEED; /* Return value */
403
404
0
    FUNC_ENTER_PACKAGE
405
406
    /* Allocate dataset info array if necessary */
407
0
    if (count > 1)
408
0
        if (NULL == (dinfo = (H5D_dset_io_info_t *)H5MM_malloc(count * sizeof(H5D_dset_io_info_t))))
409
0
            HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate dset info array buffer");
410
411
    /* Get file & memory dataspaces */
412
0
    if (H5VL__native_dataset_io_setup(count, obj, mem_type_id, mem_space_id, file_space_id, dxpl_id,
413
0
                                      (H5_flexible_const_ptr_t *)buf, dinfo) < 0)
414
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to set up file and memory dataspaces");
415
416
    /* Set DXPL for operation */
417
0
    H5CX_set_dxpl(dxpl_id);
418
419
    /* Write raw data.  Call H5D__write directly in single dset case. */
420
0
    if (H5D__write(count, dinfo) < 0)
421
0
        HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write data");
422
423
0
done:
424
    /* Clean up */
425
0
    if (H5VL__native_dataset_io_cleanup(count, mem_space_id, file_space_id, dinfo) < 0)
426
0
        HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL, "unable to release dataset info");
427
428
0
    if (dinfo != &dinfo_local)
429
0
        H5MM_xfree(dinfo);
430
431
0
    FUNC_LEAVE_NOAPI(ret_value)
432
0
} /* end H5VL__native_dataset_write() */
433
434
/*-------------------------------------------------------------------------
435
 * Function:    H5VL__native_dataset_get
436
 *
437
 * Purpose:     Handles the dataset get callback
438
 *
439
 * Return:      SUCCEED/FAIL
440
 *
441
 *-------------------------------------------------------------------------
442
 */
443
herr_t
444
H5VL__native_dataset_get(void *obj, H5VL_dataset_get_args_t *args, hid_t H5_ATTR_UNUSED dxpl_id,
445
                         void H5_ATTR_UNUSED **req)
446
0
{
447
0
    H5D_t *dset      = (H5D_t *)obj;
448
0
    herr_t ret_value = SUCCEED; /* Return value */
449
450
0
    FUNC_ENTER_PACKAGE
451
452
0
    switch (args->op_type) {
453
        /* H5Dget_space */
454
0
        case H5VL_DATASET_GET_SPACE: {
455
0
            if ((args->args.get_space.space_id = H5D__get_space(dset)) < 0)
456
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get space ID of dataset");
457
458
0
            break;
459
0
        }
460
461
        /* H5Dget_space_status */
462
0
        case H5VL_DATASET_GET_SPACE_STATUS: {
463
0
            if (H5D__get_space_status(dset, args->args.get_space_status.status) < 0)
464
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to get space status");
465
466
0
            break;
467
0
        }
468
469
        /* H5Dget_type */
470
0
        case H5VL_DATASET_GET_TYPE: {
471
0
            if ((args->args.get_type.type_id = H5D__get_type(dset)) < 0)
472
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get datatype ID of dataset");
473
474
0
            break;
475
0
        }
476
477
        /* H5Dget_create_plist */
478
0
        case H5VL_DATASET_GET_DCPL: {
479
0
            if ((args->args.get_dcpl.dcpl_id = H5D_get_create_plist(dset)) < 0)
480
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get creation property list for dataset");
481
482
0
            break;
483
0
        }
484
485
        /* H5Dget_access_plist */
486
0
        case H5VL_DATASET_GET_DAPL: {
487
0
            if ((args->args.get_dapl.dapl_id = H5D_get_access_plist(dset)) < 0)
488
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get access property list for dataset");
489
490
0
            break;
491
0
        }
492
493
        /* H5Dget_storage_size */
494
0
        case H5VL_DATASET_GET_STORAGE_SIZE: {
495
0
            if (H5D__get_storage_size(dset, args->args.get_storage_size.storage_size) < 0)
496
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get size of dataset's storage");
497
0
            break;
498
0
        }
499
500
0
        default:
501
0
            HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "can't get this type of information from dataset");
502
0
    } /* end switch */
503
504
0
done:
505
0
    FUNC_LEAVE_NOAPI(ret_value)
506
0
} /* end H5VL__native_dataset_get() */
507
508
/*-------------------------------------------------------------------------
509
 * Function:    H5VL__native_dataset_specific
510
 *
511
 * Purpose:     Handles the dataset specific callback
512
 *
513
 * Return:      SUCCEED/FAIL
514
 *
515
 *-------------------------------------------------------------------------
516
 */
517
herr_t
518
H5VL__native_dataset_specific(void *obj, H5VL_dataset_specific_args_t *args, hid_t H5_ATTR_UNUSED dxpl_id,
519
                              void H5_ATTR_UNUSED **req)
520
0
{
521
0
    H5D_t *dset      = (H5D_t *)obj;
522
0
    herr_t ret_value = SUCCEED; /* Return value */
523
524
0
    FUNC_ENTER_PACKAGE
525
526
0
    switch (args->op_type) {
527
        /* H5Dset_extent (H5Dextend - deprecated) */
528
0
        case H5VL_DATASET_SET_EXTENT: {
529
0
            if (H5D__set_extent(dset, args->args.set_extent.size) < 0)
530
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "unable to set extent of dataset");
531
0
            break;
532
0
        }
533
534
        /* H5Dflush */
535
0
        case H5VL_DATASET_FLUSH: {
536
0
            if (H5D__flush(dset, args->args.flush.dset_id) < 0)
537
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTFLUSH, FAIL, "unable to flush dataset");
538
539
0
            break;
540
0
        }
541
542
        /* H5Drefresh */
543
0
        case H5VL_DATASET_REFRESH: {
544
0
            if (H5D__refresh(dset, args->args.refresh.dset_id) < 0)
545
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL, "unable to refresh dataset");
546
547
0
            break;
548
0
        }
549
550
0
        default:
551
0
            HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "invalid specific operation");
552
0
    } /* end switch */
553
554
0
done:
555
0
    FUNC_LEAVE_NOAPI(ret_value)
556
0
} /* end H5VL__native_dataset_specific() */
557
558
/*-------------------------------------------------------------------------
559
 * Function:    H5VL__native_dataset_optional
560
 *
561
 * Purpose:     Handles the dataset optional callback
562
 *
563
 * Return:      SUCCEED/FAIL
564
 *
565
 *-------------------------------------------------------------------------
566
 */
567
herr_t
568
H5VL__native_dataset_optional(void *obj, H5VL_optional_args_t *args, hid_t dxpl_id, void H5_ATTR_UNUSED **req)
569
0
{
570
0
    H5D_t                               *dset      = (H5D_t *)obj; /* Dataset */
571
0
    H5VL_native_dataset_optional_args_t *opt_args  = args->args; /* Pointer to native operation's arguments */
572
0
    herr_t                               ret_value = SUCCEED;    /* Return value */
573
574
0
    FUNC_ENTER_PACKAGE
575
576
    /* Sanity checks */
577
0
    assert(dset);
578
579
    /* Set DXPL for operation */
580
0
    H5CX_set_dxpl(dxpl_id);
581
582
0
    switch (args->op_type) {
583
        /* H5Dformat_convert */
584
0
        case H5VL_NATIVE_DATASET_FORMAT_CONVERT: {
585
0
            switch (dset->shared->layout.type) {
586
0
                case H5D_CHUNKED:
587
                    /* Convert the chunk indexing type to version 1 B-tree if not */
588
0
                    if (dset->shared->layout.u.chunk.idx_type != H5D_CHUNK_IDX_BTREE)
589
0
                        if (H5D__format_convert(dset) < 0)
590
0
                            HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL,
591
0
                                        "unable to downgrade chunk indexing type for dataset");
592
0
                    break;
593
594
0
                case H5D_CONTIGUOUS:
595
0
                case H5D_COMPACT:
596
                    /* Downgrade the layout version to 3 if greater than 3 */
597
0
                    if (dset->shared->layout.version > H5O_LAYOUT_VERSION_DEFAULT)
598
0
                        if (H5D__format_convert(dset) < 0)
599
0
                            HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL,
600
0
                                        "unable to downgrade layout version for dataset");
601
0
                    break;
602
603
0
                case H5D_VIRTUAL:
604
                    /* Nothing to do even though layout is version 4 */
605
0
                    break;
606
607
0
                case H5D_LAYOUT_ERROR:
608
0
                case H5D_NLAYOUTS:
609
0
                    HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset layout type");
610
611
0
                default:
612
0
                    HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "unknown dataset layout type");
613
0
            } /* end switch */
614
615
0
            break;
616
0
        }
617
618
        /* H5Dget_chunk_index_type */
619
0
        case H5VL_NATIVE_DATASET_GET_CHUNK_INDEX_TYPE: {
620
            /* Make sure the dataset is chunked */
621
0
            if (H5D_CHUNKED != dset->shared->layout.type)
622
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
623
624
            /* Get the chunk indexing type */
625
0
            *opt_args->get_chunk_idx_type.idx_type = dset->shared->layout.u.chunk.idx_type;
626
627
0
            break;
628
0
        }
629
630
        /* H5Dget_chunk_storage_size */
631
0
        case H5VL_NATIVE_DATASET_GET_CHUNK_STORAGE_SIZE: {
632
0
            H5VL_native_dataset_get_chunk_storage_size_t *gcss_args = &opt_args->get_chunk_storage_size;
633
634
            /* Make sure the dataset is chunked */
635
0
            if (H5D_CHUNKED != dset->shared->layout.type)
636
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
637
638
            /* Call private function */
639
0
            if (H5D__get_chunk_storage_size(dset, gcss_args->offset, gcss_args->size) < 0)
640
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get storage size of chunk");
641
642
0
            break;
643
0
        }
644
645
        /* H5Dget_num_chunks */
646
0
        case H5VL_NATIVE_DATASET_GET_NUM_CHUNKS: {
647
0
            H5VL_native_dataset_get_num_chunks_t *gnc_args = &opt_args->get_num_chunks;
648
0
            const H5S_t                          *space    = NULL;
649
650
0
            assert(dset->shared);
651
0
            assert(dset->shared->space);
652
653
            /* When default dataspace is given, use the dataset's dataspace */
654
0
            if (gnc_args->space_id == H5S_ALL)
655
0
                space = dset->shared->space;
656
0
            else /*  otherwise, use the given space ID */
657
0
                if (NULL == (space = (const H5S_t *)H5I_object_verify(gnc_args->space_id, H5I_DATASPACE)))
658
0
                    HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a valid dataspace ID");
659
660
            /* Make sure the dataset is chunked */
661
0
            if (H5D_CHUNKED != dset->shared->layout.type)
662
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
663
664
            /* Call private function */
665
0
            if (H5D__get_num_chunks(dset, space, gnc_args->nchunks) < 0)
666
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get number of chunks");
667
668
0
            break;
669
0
        }
670
671
        /* H5Dget_chunk_info */
672
0
        case H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_IDX: {
673
0
            H5VL_native_dataset_get_chunk_info_by_idx_t *gcibi_args = &opt_args->get_chunk_info_by_idx;
674
0
            const H5S_t                                 *space;
675
676
0
            assert(dset->shared);
677
0
            assert(dset->shared->space);
678
679
            /* When default dataspace is given, use the dataset's dataspace */
680
0
            if (gcibi_args->space_id == H5S_ALL)
681
0
                space = dset->shared->space;
682
0
            else /*  otherwise, use the given space ID */
683
0
                if (NULL == (space = (const H5S_t *)H5I_object_verify(gcibi_args->space_id, H5I_DATASPACE)))
684
0
                    HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a valid dataspace ID");
685
686
            /* Make sure the dataset is chunked */
687
0
            if (H5D_CHUNKED != dset->shared->layout.type)
688
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
689
690
            /* Call private function */
691
0
            if (H5D__get_chunk_info(dset, space, gcibi_args->chk_index, gcibi_args->offset,
692
0
                                    gcibi_args->filter_mask, gcibi_args->addr, gcibi_args->size) < 0)
693
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk info by index");
694
695
0
            break;
696
0
        }
697
698
        /* H5Dget_chunk_info_by_coord */
699
0
        case H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_COORD: {
700
0
            H5VL_native_dataset_get_chunk_info_by_coord_t *gcibc_args = &opt_args->get_chunk_info_by_coord;
701
702
0
            assert(dset->shared);
703
704
            /* Make sure the dataset is chunked */
705
0
            if (H5D_CHUNKED != dset->shared->layout.type)
706
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
707
708
            /* Call private function */
709
0
            if (H5D__get_chunk_info_by_coord(dset, gcibc_args->offset, gcibc_args->filter_mask,
710
0
                                             gcibc_args->addr, gcibc_args->size) < 0)
711
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL,
712
0
                            "can't get chunk info by its logical coordinates");
713
714
0
            break;
715
0
        }
716
717
        /* H5Dread_chunk */
718
0
        case H5VL_NATIVE_DATASET_CHUNK_READ: {
719
0
            H5VL_native_dataset_chunk_read_t *chunk_read_args = &opt_args->chunk_read;
720
0
            hsize_t offset_copy[H5O_LAYOUT_NDIMS]; /* Internal copy of chunk offset */
721
722
            /* Check arguments */
723
0
            if (NULL == dset->oloc.file)
724
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dataset is not associated with a file");
725
0
            if (H5D_CHUNKED != dset->shared->layout.type)
726
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
727
728
            /* Copy the user's offset array so we can be sure it's terminated properly.
729
             * (we don't want to mess with the user's buffer).
730
             */
731
0
            if (H5D__chunk_get_offset_copy(dset, chunk_read_args->offset, offset_copy) < 0)
732
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "failure to copy offset array");
733
734
            /* Read the raw chunk */
735
0
            if (H5D__chunk_direct_read(dset, offset_copy, &chunk_read_args->filters, chunk_read_args->buf,
736
0
                                       chunk_read_args->buf_size) < 0)
737
0
                HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read unprocessed chunk data");
738
739
0
            break;
740
0
        }
741
742
        /* H5Dwrite_chunk */
743
0
        case H5VL_NATIVE_DATASET_CHUNK_WRITE: {
744
0
            H5VL_native_dataset_chunk_write_t *chunk_write_args = &opt_args->chunk_write;
745
0
            hsize_t offset_copy[H5O_LAYOUT_NDIMS]; /* Internal copy of chunk offset */
746
747
            /* Check arguments */
748
0
            if (NULL == dset->oloc.file)
749
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dataset is not associated with a file");
750
0
            if (H5D_CHUNKED != dset->shared->layout.type)
751
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
752
753
            /* Copy the user's offset array so we can be sure it's terminated properly.
754
             * (we don't want to mess with the user's buffer).
755
             */
756
0
            if (H5D__chunk_get_offset_copy(dset, chunk_write_args->offset, offset_copy) < 0)
757
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "failure to copy offset array");
758
759
            /* Write chunk */
760
0
            if (H5D__chunk_direct_write(dset, chunk_write_args->filters, offset_copy, chunk_write_args->size,
761
0
                                        chunk_write_args->buf) < 0)
762
0
                HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write unprocessed chunk data");
763
764
0
            break;
765
0
        }
766
767
        /* H5Dvlen_get_buf_size */
768
0
        case H5VL_NATIVE_DATASET_GET_VLEN_BUF_SIZE: {
769
0
            H5VL_native_dataset_get_vlen_buf_size_t *gvbs_args = &opt_args->get_vlen_buf_size;
770
771
0
            if (H5D__vlen_get_buf_size(dset, gvbs_args->type_id, gvbs_args->space_id, gvbs_args->size) < 0)
772
0
                HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get size of vlen buf needed");
773
0
            break;
774
0
        }
775
776
        /* H5Dget_offset */
777
0
        case H5VL_NATIVE_DATASET_GET_OFFSET: {
778
            /* Get offset */
779
0
            *opt_args->get_offset.offset = H5D__get_offset(dset);
780
781
0
            break;
782
0
        }
783
784
        /* H5Dchunk_iter */
785
0
        case H5VL_NATIVE_DATASET_CHUNK_ITER: {
786
            /* Sanity check */
787
0
            assert(dset->shared);
788
789
            /* Make sure the dataset is chunked */
790
0
            if (H5D_CHUNKED != dset->shared->layout.type)
791
0
                HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset");
792
793
            /* Call private function */
794
0
            if ((ret_value = H5D__chunk_iter(dset, opt_args->chunk_iter.op, opt_args->chunk_iter.op_data)) <
795
0
                0)
796
0
                HERROR(H5E_DATASET, H5E_BADITER, "chunk iteration failed");
797
798
0
            break;
799
0
        }
800
801
0
        default:
802
0
            HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "invalid optional operation");
803
0
    } /* end switch */
804
805
0
done:
806
0
    FUNC_LEAVE_NOAPI(ret_value)
807
0
} /* end H5VL__native_dataset_optional() */
808
809
/*-------------------------------------------------------------------------
810
 * Function:    H5VL__native_dataset_close
811
 *
812
 * Purpose:     Handles the dataset close callback
813
 *
814
 * Return:      Success:    SUCCEED
815
 *              Failure:    FAIL (dataset will not be closed)
816
 *
817
 *-------------------------------------------------------------------------
818
 */
819
herr_t
820
H5VL__native_dataset_close(void *dset, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req)
821
0
{
822
0
    herr_t ret_value = SUCCEED; /* Return value */
823
824
0
    FUNC_ENTER_PACKAGE
825
826
0
    if (H5D_close((H5D_t *)dset) < 0)
827
0
        HGOTO_ERROR(H5E_DATASET, H5E_CANTDEC, FAIL, "can't close dataset");
828
829
0
done:
830
0
    FUNC_LEAVE_NOAPI(ret_value)
831
0
} /* end H5VL__native_dataset_close() */