Coverage Report

Created: 2023-01-24 06:07

/src/htslib/htslib/khash_str2int.h
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/*  khash_str2int.h -- C-string to integer hash table.
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    Copyright (C) 2013-2014,2020 Genome Research Ltd.
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    Author: Petr Danecek <pd3@sanger.ac.uk>
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in
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all copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
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THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
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DEALINGS IN THE SOFTWARE.  */
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#ifndef HTSLIB_KHASH_STR2INT_H
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#define HTSLIB_KHASH_STR2INT_H
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#include "khash.h"
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KHASH_MAP_INIT_STR(str2int, int)
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/*
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 *  Wrappers for khash dictionaries used by mpileup.
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 */
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static inline void *khash_str2int_init(void)
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{
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    return kh_init(str2int);
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}
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/*
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 *  Destroy the hash structure, but not the keys
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 */
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static inline void khash_str2int_destroy(void *_hash)
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{
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    if (hash) kh_destroy(str2int, hash); // Note that strings are not freed.
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}
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/*
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 *  Destroys both the hash structure and the keys
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 */
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static inline void khash_str2int_destroy_free(void *_hash)
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0
{
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    khint_t k;
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    if (hash == 0) return;
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    for (k = 0; k < kh_end(hash); ++k)
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        if (kh_exist(hash, k)) free((char*)kh_key(hash, k));
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    kh_destroy(str2int, hash);
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}
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/*
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 *  Returns 1 if key exists or 0 if not
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 */
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static inline int khash_str2int_has_key(void *_hash, const char *str)
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0
{
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    khint_t k = kh_get(str2int, hash, str);
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    if ( k == kh_end(hash) ) return 0;
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    return 1;
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}
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/*
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 *  Returns 0 on success and -1 when the key is not present. On success,
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 *  *value is set, unless NULL is passed.
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 */
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static inline int khash_str2int_get(void *_hash, const char *str, int *value)
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{
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    khint_t k;
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    if ( !hash ) return -1;
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    k = kh_get(str2int, hash, str);
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    if ( k == kh_end(hash) ) return -1;
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    if ( !value ) return 0;
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    *value = kh_val(hash, k);
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    return 0;
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}
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/*
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 *  Add a new string to the dictionary, auto-incrementing the value.
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 *  On success returns the newly inserted integer id, on error -1
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 *  is returned. Note that the key must continue to exist throughout
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 *  the whole life of _hash.
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 */
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static inline int khash_str2int_inc(void *_hash, const char *str)
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{
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    khint_t k;
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    int ret;
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    if ( !hash ) return -1;
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    k = kh_put(str2int, hash, str, &ret);
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    if (ret < 0) return -1;
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    if (ret == 0) return kh_val(hash, k);
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    kh_val(hash, k) = kh_size(hash) - 1;
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    return kh_val(hash, k);
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}
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/*
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 *  Set a new key,value pair. On success returns the bin index, on
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 *  error -1 is returned. Note that the key must continue to exist
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 *  throughout the whole life of _hash.
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 */
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static inline int khash_str2int_set(void *_hash, const char *str, int value)
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{
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    khint_t k;
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    int ret;
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    if ( !hash ) return -1;
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    k = kh_put(str2int, hash, str, &ret);
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    if (ret < 0) return -1;
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    kh_val(hash,k) = value;
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    return k;
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}
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/*
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 *  Return the number of keys in the hash table.
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 */
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static inline int khash_str2int_size(void *_hash)
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{
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    khash_t(str2int) *hash = (khash_t(str2int)*)_hash;
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    return kh_size(hash);
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}
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#endif