/src/MapServer/src/flatgeobuf/flatgeobuf_c.cpp
Line | Count | Source (jump to first uncovered line) |
1 | | #include "flatgeobuf_c.h" |
2 | | |
3 | | #include "feature_generated.h" |
4 | | #include "geometryreader.h" |
5 | | #include "packedrtree.h" |
6 | | #include <stdexcept> |
7 | | |
8 | | using namespace mapserver::flatbuffers; |
9 | | using namespace mapserver::FlatGeobuf; |
10 | | |
11 | | typedef flatgeobuf_ctx ctx; |
12 | | |
13 | | uint8_t flatgeobuf_magicbytes[] = { 0x66, 0x67, 0x62, 0x03, 0x66, 0x67, 0x62, 0x01 }; |
14 | | uint8_t FLATGEOBUF_MAGICBYTES_SIZE = sizeof(flatgeobuf_magicbytes); |
15 | | uint32_t INIT_BUFFER_SIZE = 1024 * 4; |
16 | | |
17 | | template <typename T> |
18 | | void parse_value(uint8_t *data, char **values, uint16_t i, uint32_t &offset, bool found) |
19 | 0 | { |
20 | 0 | using std::to_string; |
21 | 0 | if (found) |
22 | 0 | { |
23 | 0 | msFree(values[i]); |
24 | 0 | values[i] = msStrdup(to_string(*((T*) (data + offset))).c_str()); |
25 | 0 | } |
26 | 0 | offset += sizeof(T); |
27 | 0 | } Unexecuted instantiation: void parse_value<unsigned char>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<signed char>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<short>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<unsigned short>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<int>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<unsigned int>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<long>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<unsigned long>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<float>(unsigned char*, char**, unsigned short, unsigned int&, bool) Unexecuted instantiation: void parse_value<double>(unsigned char*, char**, unsigned short, unsigned int&, bool) |
28 | | |
29 | | ctx *flatgeobuf_init_ctx() |
30 | 0 | { |
31 | 0 | ctx *c = (ctx *) malloc(sizeof(ctx)); |
32 | 0 | memset(c, 0, sizeof(ctx)); |
33 | 0 | c->is_null_geom = false; |
34 | 0 | c->done = false; |
35 | 0 | return c; |
36 | 0 | } |
37 | | |
38 | | void flatgeobuf_free_ctx(ctx *ctx) |
39 | 0 | { |
40 | 0 | if (ctx->columns) { |
41 | 0 | for (uint32_t i = 0; i < ctx->columns_len; i++) |
42 | 0 | free(ctx->columns[i].name); |
43 | 0 | free(ctx->columns); |
44 | 0 | } |
45 | 0 | if (ctx->search_result) |
46 | 0 | free(ctx->search_result); |
47 | 0 | if (ctx->buf) |
48 | 0 | free(ctx->buf); |
49 | 0 | if (ctx->wkt) |
50 | 0 | free(ctx->wkt); |
51 | 0 | free(ctx); |
52 | 0 | } |
53 | | |
54 | | void flatgeobuf_ensure_line(ctx *ctx, uint32_t len) |
55 | 0 | { |
56 | 0 | if (!ctx->line) { |
57 | 0 | ctx->line_len = len; |
58 | 0 | ctx->line = (lineObj *) malloc(ctx->line_len * sizeof(lineObj)); |
59 | 0 | return; |
60 | 0 | } |
61 | 0 | if (ctx->line_len < len) { |
62 | 0 | ctx->line_len = len; |
63 | 0 | ctx->line = (lineObj *) realloc(ctx->buf, ctx->line_len * sizeof(lineObj)); |
64 | 0 | } |
65 | 0 | } |
66 | | |
67 | | void flatgeobuf_ensure_point(ctx *ctx, uint32_t len) |
68 | 0 | { |
69 | 0 | if (!ctx->point) { |
70 | 0 | ctx->point_len = len; |
71 | 0 | ctx->point = (pointObj *) malloc(ctx->point_len * sizeof(pointObj)); |
72 | 0 | return; |
73 | 0 | } |
74 | 0 | if (ctx->point_len < len) { |
75 | 0 | ctx->point_len = len; |
76 | 0 | ctx->point = (pointObj *) realloc(ctx->buf, ctx->point_len * sizeof(pointObj)); |
77 | 0 | } |
78 | 0 | } |
79 | | |
80 | | int flatgeobuf_ensure_buf(ctx *ctx, uint32_t size) |
81 | 0 | { |
82 | 0 | if (size > 100 * 1024 * 1024) { |
83 | 0 | msSetError(MS_FGBERR, "Invalid buffer size requested", "flatgeobuf_ensure_buf"); |
84 | 0 | return -1; |
85 | 0 | } |
86 | 0 | if (!ctx->buf) { |
87 | 0 | ctx->buf_size = std::max(INIT_BUFFER_SIZE, size); |
88 | 0 | ctx->buf = (uint8_t *) malloc(ctx->buf_size); |
89 | 0 | if (ctx->buf == NULL) { |
90 | 0 | msSetError(MS_FGBERR, "Failed to allocate buffer", "flatgeobuf_ensure_buf"); |
91 | 0 | return -1; |
92 | 0 | } |
93 | 0 | return 0; |
94 | 0 | } |
95 | 0 | if (ctx->buf_size < size) { |
96 | 0 | ctx->buf_size = std::max(ctx->buf_size * 2, size); |
97 | 0 | auto buf = (uint8_t *) realloc(ctx->buf, ctx->buf_size); |
98 | 0 | if (buf == NULL) { |
99 | 0 | msSetError(MS_FGBERR, "Failed to reallocate buffer", "flatgeobuf_ensure_buf"); |
100 | 0 | return -1; |
101 | 0 | } |
102 | 0 | ctx->buf = buf; |
103 | 0 | } |
104 | 0 | return 0; |
105 | 0 | } |
106 | | |
107 | | int flatgeobuf_decode_feature(ctx *ctx, layerObj *layer, shapeObj *shape) |
108 | 0 | { |
109 | 0 | ctx->is_null_geom = false; |
110 | |
|
111 | 0 | uint32_t featureSize; |
112 | 0 | if (VSIFReadL(&featureSize, sizeof(featureSize), 1, ctx->file) != 1) { |
113 | 0 | if (VSIFEofL(ctx->file)) { |
114 | 0 | ctx->done = true; |
115 | 0 | return 0; |
116 | 0 | } |
117 | 0 | return -1; |
118 | 0 | } |
119 | | |
120 | 0 | ctx->offset += sizeof(uoffset_t); |
121 | 0 | if (flatgeobuf_ensure_buf(ctx, featureSize) != 0) { |
122 | 0 | return -1; |
123 | 0 | } |
124 | | |
125 | 0 | if (VSIFReadL(ctx->buf, 1, featureSize, ctx->file) != featureSize) { |
126 | 0 | msSetError(MS_FGBERR, "Failed to read feature", "flatgeobuf_decode_feature"); |
127 | 0 | return -1; |
128 | 0 | } |
129 | 0 | ctx->offset += featureSize; |
130 | 0 | auto feature = GetFeature(ctx->buf); |
131 | 0 | const auto geometry = feature->geometry(); |
132 | 0 | if (geometry) { |
133 | 0 | GeometryReader(ctx, geometry).read(shape); |
134 | 0 | } else { |
135 | 0 | ctx->is_null_geom = true; |
136 | 0 | return 0; |
137 | 0 | } |
138 | 0 | auto properties = feature->properties(); |
139 | 0 | if (properties && properties->size() != 0) { |
140 | 0 | ctx->properties = (uint8_t *) properties->data(); |
141 | 0 | ctx->properties_size = properties->size(); |
142 | 0 | flatgeobuf_decode_properties(ctx, layer, shape); |
143 | 0 | } else { |
144 | 0 | ctx->properties_size = 0; |
145 | 0 | } |
146 | |
|
147 | 0 | return 0; |
148 | 0 | } |
149 | | |
150 | | int flatgeobuf_decode_properties(ctx *ctx, layerObj *layer, shapeObj *shape) |
151 | 0 | { |
152 | 0 | uint8_t type; |
153 | 0 | uint32_t offset = 0; |
154 | 0 | uint8_t *data = ctx->properties; |
155 | 0 | uint32_t size = ctx->properties_size; |
156 | 0 | uint16_t numvalues = layer->numitems; |
157 | 0 | bool found; |
158 | 0 | char **values; |
159 | |
|
160 | 0 | if (numvalues == 0) |
161 | 0 | return 0; |
162 | | |
163 | 0 | values = (char **) msSmallCalloc(sizeof(char *), numvalues); |
164 | 0 | if (shape->values) msFreeCharArray(shape->values, shape->numvalues); |
165 | 0 | shape->numvalues = numvalues; |
166 | 0 | shape->values = values; |
167 | |
|
168 | 0 | if (size > 0 && size < (sizeof(uint16_t) + sizeof(uint8_t))) { |
169 | 0 | msSetError(MS_FGBERR, "Unexpected properties data size", "flatgeobuf_decode_properties"); |
170 | 0 | return -1; |
171 | 0 | } |
172 | 0 | while (offset + 1 < size) { |
173 | 0 | uint16_t i; |
174 | 0 | memcpy(&i, data + offset, sizeof(uint16_t)); |
175 | 0 | offset += sizeof(uint16_t); |
176 | 0 | if (i >= ctx->columns_len) { |
177 | 0 | msSetError(MS_FGBERR, "Column index out of range", "flatgeobuf_decode_properties"); |
178 | 0 | return -1; |
179 | 0 | } |
180 | 0 | const auto& column = ctx->columns[i]; |
181 | 0 | const int32_t ii = column.itemindex; |
182 | 0 | found = ii != -1; |
183 | 0 | type = column.type; |
184 | 0 | switch (type) { |
185 | 0 | case flatgeobuf_column_type_bool: |
186 | 0 | parse_value<uint8_t>(data, values, ii, offset, found); |
187 | 0 | break; |
188 | 0 | case flatgeobuf_column_type_byte: |
189 | 0 | parse_value<int8_t>(data, values, ii, offset, found); |
190 | 0 | break; |
191 | 0 | case flatgeobuf_column_type_ubyte: |
192 | 0 | parse_value<uint8_t>(data, values, ii, offset, found); |
193 | 0 | break; |
194 | 0 | case flatgeobuf_column_type_short: |
195 | 0 | parse_value<int16_t>(data, values, ii, offset, found); |
196 | 0 | break; |
197 | 0 | case flatgeobuf_column_type_ushort: |
198 | 0 | parse_value<uint16_t>(data, values, ii, offset, found); |
199 | 0 | break; |
200 | 0 | case flatgeobuf_column_type_int: |
201 | 0 | parse_value<int32_t>(data, values, ii, offset, found); |
202 | 0 | break; |
203 | 0 | case flatgeobuf_column_type_uint: |
204 | 0 | parse_value<uint32_t>(data, values, ii, offset, found); |
205 | 0 | break; |
206 | 0 | case flatgeobuf_column_type_long: |
207 | 0 | parse_value<int64_t>(data, values, ii, offset, found); |
208 | 0 | break; |
209 | 0 | case flatgeobuf_column_type_ulong: |
210 | 0 | parse_value<uint64_t>(data, values, ii, offset, found); |
211 | 0 | break; |
212 | 0 | case flatgeobuf_column_type_float: |
213 | 0 | parse_value<float>(data, values, ii, offset, found); |
214 | 0 | break; |
215 | 0 | case flatgeobuf_column_type_double: |
216 | 0 | parse_value<double>(data, values, ii, offset, found); |
217 | 0 | break; |
218 | 0 | case flatgeobuf_column_type_datetime: |
219 | 0 | case flatgeobuf_column_type_string: { |
220 | 0 | uint32_t len; |
221 | 0 | if (offset + sizeof(len) > size){ |
222 | 0 | msSetError(MS_FGBERR, "Invalid size for string value", "flatgeobuf_decode_properties"); |
223 | 0 | return -1; |
224 | 0 | } |
225 | 0 | memcpy(&len, data + offset, sizeof(uint32_t)); |
226 | 0 | offset += sizeof(len); |
227 | 0 | if (found) { |
228 | 0 | char *str = (char *) msSmallMalloc(len + 1); |
229 | 0 | memcpy(str, data + offset, len); |
230 | 0 | str[len] = '\0'; |
231 | 0 | msFree(values[ii]); |
232 | 0 | values[ii] = str; |
233 | 0 | } |
234 | 0 | offset += len; |
235 | 0 | break; |
236 | 0 | } |
237 | 0 | } |
238 | 0 | } |
239 | | |
240 | 0 | for(int i = 0; i < shape->numvalues; i++) |
241 | 0 | { |
242 | 0 | if( shape->values[i] == NULL) |
243 | 0 | shape->values[i] = msStrdup(""); |
244 | 0 | } |
245 | |
|
246 | 0 | return 0; |
247 | 0 | } |
248 | | |
249 | | int flatgeobuf_check_magicbytes(ctx *ctx) |
250 | 0 | { |
251 | 0 | if (ctx->offset != 0) { |
252 | 0 | msSetError(MS_FGBERR, "Unexpected offset", "flatgeobuf_check_magicbytes"); |
253 | 0 | return -1; |
254 | 0 | } |
255 | 0 | if (flatgeobuf_ensure_buf(ctx, FLATGEOBUF_MAGICBYTES_SIZE) != 0) |
256 | 0 | return -1; |
257 | 0 | if (VSIFReadL(ctx->buf, 8, 1, ctx->file) != 1) { |
258 | 0 | msSetError(MS_FGBERR, "Failed to read magicbytes", "flatgeobuf_check_magicbytes"); |
259 | 0 | return -1; |
260 | 0 | } |
261 | 0 | uint32_t i; |
262 | 0 | for (i = 0; i < FLATGEOBUF_MAGICBYTES_SIZE / 2; i++) { |
263 | 0 | if (ctx->buf[i] != flatgeobuf_magicbytes[i]) { |
264 | 0 | msSetError(MS_FGBERR, "Data is not FlatGeobuf", "flatgeobuf_check_magicbytes"); |
265 | 0 | return -1; |
266 | 0 | } |
267 | 0 | } |
268 | 0 | ctx->offset += FLATGEOBUF_MAGICBYTES_SIZE; |
269 | 0 | return 0; |
270 | 0 | } |
271 | | |
272 | | int flatgeobuf_decode_header(ctx *ctx) |
273 | 0 | { |
274 | 0 | if (ctx->offset != FLATGEOBUF_MAGICBYTES_SIZE) { |
275 | 0 | msSetError(MS_FGBERR, "Unexpected offset", "flatgeobuf_decode_header"); |
276 | 0 | return -1; |
277 | 0 | } |
278 | 0 | if (VSIFSeekL(ctx->file, ctx->offset, SEEK_SET) == -1) { |
279 | 0 | msSetError(MS_FGBERR, "Unable to get seek in file", "flatgeobuf_decode_header"); |
280 | 0 | return -1; |
281 | 0 | } |
282 | 0 | uint32_t headerSize; |
283 | 0 | if (VSIFReadL(&headerSize, 4, 1, ctx->file) != 1) { |
284 | 0 | msSetError(MS_FGBERR, "Failed to read header size", "flatgeobuf_decode_header"); |
285 | 0 | return -1; |
286 | 0 | } |
287 | 0 | ctx->offset += sizeof(uoffset_t); |
288 | 0 | if (flatgeobuf_ensure_buf(ctx, headerSize) != 0) { |
289 | 0 | return -1; |
290 | 0 | } |
291 | 0 | if (VSIFReadL(ctx->buf, 1, headerSize, ctx->file) != headerSize) { |
292 | 0 | msSetError(MS_FGBERR, "Failed to read header", "flatgeobuf_decode_header"); |
293 | 0 | return -1; |
294 | 0 | } |
295 | 0 | auto header = GetHeader(ctx->buf); |
296 | 0 | ctx->offset += headerSize; |
297 | |
|
298 | 0 | ctx->geometry_type = (uint8_t) header->geometry_type(); |
299 | 0 | ctx->features_count = header->features_count(); |
300 | 0 | auto envelope = header->envelope(); |
301 | 0 | if (envelope != nullptr) { |
302 | 0 | ctx->has_extent = true; |
303 | 0 | ctx->xmin = envelope->Get(0); |
304 | 0 | ctx->ymin = envelope->Get(1); |
305 | 0 | ctx->xmax = envelope->Get(2); |
306 | 0 | ctx->ymax = envelope->Get(3); |
307 | 0 | ctx->bounds.minx = ctx->xmin; |
308 | 0 | ctx->bounds.miny = ctx->ymin; |
309 | 0 | ctx->bounds.maxx = ctx->xmax; |
310 | 0 | ctx->bounds.maxy = ctx->ymax; |
311 | 0 | } |
312 | 0 | ctx->has_z = header->has_z(); |
313 | 0 | ctx->has_m = header->has_m(); |
314 | 0 | ctx->has_t = header->has_t(); |
315 | 0 | ctx->has_tm = header->has_tm(); |
316 | 0 | ctx->index_node_size = header->index_node_size(); |
317 | 0 | auto crs = header->crs(); |
318 | 0 | if (crs != nullptr) { |
319 | 0 | ctx->srid = crs->code(); |
320 | 0 | auto wkt = crs->wkt(); |
321 | 0 | if (wkt != nullptr) |
322 | 0 | ctx->wkt = msStrdup(wkt->c_str()); |
323 | 0 | } |
324 | 0 | auto columns = header->columns(); |
325 | 0 | if (columns != nullptr) { |
326 | 0 | auto size = columns->size(); |
327 | 0 | ctx->columns = (flatgeobuf_column *) malloc(size * sizeof(flatgeobuf_column)); |
328 | 0 | memset(ctx->columns, 0, size * sizeof(flatgeobuf_column)); |
329 | 0 | ctx->columns_len = size; |
330 | 0 | for (uint32_t i = 0; i < size; i++) { |
331 | 0 | auto column = columns->Get(i); |
332 | 0 | ctx->columns[i].name = msStrdup(column->name()->c_str()); |
333 | 0 | ctx->columns[i].type = (uint8_t) column->type(); |
334 | 0 | ctx->columns[i].itemindex = -1; |
335 | 0 | } |
336 | 0 | } |
337 | |
|
338 | 0 | ctx->index_offset = ctx->offset; |
339 | 0 | ctx->feature_offset = ctx->offset; |
340 | 0 | if ( ctx->index_node_size > 0) |
341 | 0 | ctx->feature_offset += PackedRTree::size(ctx->features_count, ctx->index_node_size); |
342 | |
|
343 | 0 | return 0; |
344 | 0 | } |
345 | | |
346 | | int flatgeobuf_index_search(ctx *ctx, rectObj *rect) |
347 | 0 | { |
348 | 0 | const auto treeOffset = ctx->offset; |
349 | 0 | const auto readNode = [treeOffset, ctx] (uint8_t *buf, size_t i, size_t s) { |
350 | 0 | if (VSIFSeekL(ctx->file, treeOffset + i, SEEK_SET) == -1) |
351 | 0 | throw std::runtime_error("Unable to seek in file"); |
352 | 0 | if (VSIFReadL(buf, 1, s, ctx->file) != s) |
353 | 0 | throw std::runtime_error("Unable to read file"); |
354 | 0 | }; |
355 | 0 | NodeItem n { rect->minx, rect->miny, rect->maxx, rect->maxy, 0 }; |
356 | 0 | try { |
357 | 0 | const auto foundItems = PackedRTree::streamSearch(ctx->features_count, ctx->index_node_size, n, readNode); |
358 | 0 | ctx->search_result = (flatgeobuf_search_item *) malloc(foundItems.size() * sizeof(flatgeobuf_search_item)); |
359 | 0 | memcpy(ctx->search_result, foundItems.data(), foundItems.size() * sizeof(flatgeobuf_search_item)); |
360 | 0 | ctx->search_result_len = (uint32_t) foundItems.size(); |
361 | 0 | } catch (const std::exception &e) { |
362 | 0 | msSetError(MS_FGBERR, "Unable to seek or read file", "flatgeobuf_index_search"); |
363 | 0 | return -1; |
364 | 0 | } |
365 | 0 | return 0; |
366 | 0 | } |
367 | | |
368 | | int flatgeobuf_index_skip(ctx *ctx) |
369 | 0 | { |
370 | 0 | auto treeSize = PackedRTree::size(ctx->features_count, ctx->index_node_size); |
371 | 0 | ctx->offset += treeSize; |
372 | 0 | if (VSIFSeekL(ctx->file, ctx->offset, SEEK_SET) == -1) { |
373 | 0 | msSetError(MS_FGBERR, "Unable to seek in file", "flatgeobuf_index_skip"); |
374 | 0 | return -1; |
375 | 0 | } |
376 | 0 | return 0; |
377 | 0 | } |
378 | | |
379 | | int flatgeobuf_read_feature_offset(ctx *ctx, uint64_t index, uint64_t *featureOffset) |
380 | 0 | { |
381 | 0 | try { |
382 | 0 | const auto levelBounds = PackedRTree::generateLevelBounds(ctx->features_count, ctx->index_node_size); |
383 | 0 | const auto bottomLevelOffset = ctx->index_offset + (levelBounds.front().first * sizeof(NodeItem)); |
384 | 0 | const auto nodeItemOffset = bottomLevelOffset + (index * sizeof(NodeItem)); |
385 | 0 | const auto featureOffsetOffset = nodeItemOffset + (sizeof(double) * 4); |
386 | 0 | if (VSIFSeekL(ctx->file, featureOffsetOffset, SEEK_SET) == -1) { |
387 | 0 | msSetError(MS_FGBERR, "Failed to seek feature offset", "flatgeobuf_read_feature_offset"); |
388 | 0 | return -1; |
389 | 0 | } |
390 | 0 | if (VSIFReadL(featureOffset, sizeof(uint64_t), 1, ctx->file) != 1) { |
391 | 0 | msSetError(MS_FGBERR, "Failed to read feature offset", "flatgeobuf_read_feature_offset"); |
392 | 0 | return -1; |
393 | 0 | } |
394 | 0 | return 0; |
395 | 0 | } catch (const std::exception& e) { |
396 | 0 | msSetError(MS_FGBERR, "Failed to calculate tree size", "flatgeobuf_read_feature_offset"); |
397 | 0 | return -1; |
398 | 0 | } |
399 | 0 | } |