/*

 *  Copyright 2018, University Corporation for Atmospheric Research

 *      See netcdf/COPYRIGHT file for copying and redistribution conditions.

 */

/* $Id: var.c,v 1.144 2010/05/30 00:50:35 russ Exp $ */

#if HAVE_CONFIG_H

#include <config.h>

#endif

#include "nc3internal.h"

#include <stdlib.h>

#include <string.h>

#include <assert.h>

#include <limits.h>

#include "ncx.h"

#include "rnd.h"

#include "ncutf8.h"

#include "nc3dispatch.h"

#ifndef OFF_T_MAX

#if 0

#define OFF_T_MAX (~ (off_t) 0 - (~ (off_t) 0 << (CHAR_BIT * sizeof (off_t) - 1)))

#endif

/* The behavior above is undefined, re: bitshifting a negative value, according

   to warnings thrown by clang/gcc.  An alternative OFF_T_MAX was written

   based on info found at:

   * http://stackoverflow.com/questions/4514572/c-question-off-t-and-other-signed-integer-types-minimum-and-maximum-values

   */

#define MAX_INT_VAL_STEP(t) \

    ((t) 1 << (CHAR_BIT * sizeof(t) - 1 - ((t) -1 < 1)))

#define MAX_INT_VAL(t) \

    ((MAX_INT_VAL_STEP(t) - 1) + MAX_INT_VAL_STEP(t))

#define MIN_INT_VAL(t) \

    ((t) -MAX_INT_VAL(t) - 1)

#define OFF_T_MAX MAX_INT_VAL(off_t)

#endif

/*

 * Free var

 * Formerly NC_free_var(var)

 */

void

free_NC_var(NC_var *varp)

{

  if(varp == NULL)

    return;

  free_NC_attrarrayV(&varp->attrs);

  free_NC_string(varp->name);

#ifndef MALLOCHACK

  if(varp->dimids != NULL) free(varp->dimids);

  if(varp->shape != NULL) free(varp->shape);

  if(varp->dsizes != NULL) free(varp->dsizes);

#endif /*!MALLOCHACK*/

  free(varp);

}

/*

 * Common code for new_NC_var()

 * and ncx_get_NC_var()

 */

NC_var *

new_x_NC_var(

  NC_string *strp,

  size_t ndims)

{

  NC_var *varp;

  const size_t o1 = M_RNDUP(ndims * sizeof(int));

  const size_t o2 = M_RNDUP(ndims * sizeof(size_t));

#ifdef MALLOCHACK

  const size_t sz =  M_RNDUP(sizeof(NC_var)) +

     o1 + o2 + ndims * sizeof(off_t);

#else /*!MALLOCHACK*/

  const size_t o3 = ndims * sizeof(off_t);

  const size_t sz = sizeof(NC_var);

#endif /*!MALLOCHACK*/

  varp = (NC_var *) malloc(sz);

  if(varp == NULL )

    return NULL;

  (void) memset(varp, 0, sz);

  varp->name = strp;

  varp->ndims = ndims;

  if(ndims != 0)

  {

#ifdef MALLOCHACK

    /*

     * NOTE: lint may complain about the next 3 lines:

     * "pointer cast may result in improper alignment".

     * We use the M_RNDUP() macro to get the proper alignment.

     */

    varp->dimids = (int *)((char *)varp + M_RNDUP(sizeof(NC_var)));

    varp->shape = (size_t *)((char *)varp->dimids + o1);

    varp->dsizes = (off_t *)((char *)varp->shape + o2);

#else /*!MALLOCHACK*/

    varp->dimids = (int*)malloc(o1);

    varp->shape = (size_t*)malloc(o2);

    varp->dsizes = (off_t*)malloc(o3);

#endif /*!MALLOCHACK*/

  } else {

    varp->dimids = NULL;

    varp->shape = NULL;

    varp->dsizes=NULL;

  }

  varp->xsz = 0;

  varp->len = 0;

  varp->begin = 0;

  return varp;

}

/*

 * Formerly

NC_new_var()

 */

static NC_var *

new_NC_var(const char *uname, nc_type type,

  size_t ndims, const int *dimids)

{

  NC_string *strp = NULL;

  NC_var *varp = NULL;

  int stat;

  char* name;

        stat = nc_utf8_normalize((const unsigned char *)uname,(unsigned char **)&name);

        if(stat != NC_NOERR)

      return NULL;

  strp = new_NC_string(strlen(name), name);

  free(name);

  if(strp == NULL)

    return NULL;

  varp = new_x_NC_var(strp, ndims);

  if(varp == NULL )

  {

    free_NC_string(strp);

    return NULL;

  }

  varp->type = type;

  if( ndims != 0 && dimids != NULL)

    (void) memcpy(varp->dimids, dimids, ndims * sizeof(int));

    else

      varp->dimids=NULL;

  return(varp);

}

static NC_var *

dup_NC_var(const NC_var *rvarp)

{

  NC_var *varp = new_NC_var(rvarp->name->cp, rvarp->type,

     rvarp->ndims, rvarp->dimids);

  if(varp == NULL)

    return NULL;

  if(dup_NC_attrarrayV(&varp->attrs, &rvarp->attrs) != NC_NOERR)

  {

    free_NC_var(varp);

    return NULL;

  }

  (void) memcpy(varp->shape, rvarp->shape,

       rvarp->ndims * sizeof(size_t));

  (void) memcpy(varp->dsizes, rvarp->dsizes,

       rvarp->ndims * sizeof(off_t));

  varp->xsz = rvarp->xsz;

  varp->len = rvarp->len;

  varp->begin = rvarp->begin;

  return varp;

}

/* vararray */

/*

 * Free the stuff "in" (referred to by) an NC_vararray.

 * Leaves the array itself allocated.

 */

void

free_NC_vararrayV0(NC_vararray *ncap)

{

  assert(ncap != NULL);

  if(ncap->nelems == 0)

    return;

  assert(ncap->value != NULL);

  {

    NC_var **vpp = ncap->value;

    NC_var *const *const end = &vpp[ncap->nelems];

    for( /*NADA*/; vpp < end; vpp++)

    {

      free_NC_var(*vpp);

      *vpp = NULL;

    }

  }

  ncap->nelems = 0;

}

/*

 * Free NC_vararray values.

 * formerly

NC_free_array()

 */

void

free_NC_vararrayV(NC_vararray *ncap)

{

  assert(ncap != NULL);

  if(ncap->nalloc == 0)

    return;

  NC_hashmapfree(ncap->hashmap);

  ncap->hashmap = NULL;

  assert(ncap->value != NULL);

  free_NC_vararrayV0(ncap);

  free(ncap->value);

  ncap->value = NULL;

  ncap->nalloc = 0;

}

int

dup_NC_vararrayV(NC_vararray *ncap, const NC_vararray *ref)

{

  int status = NC_NOERR;

  assert(ref != NULL);

  assert(ncap != NULL);

  if(ref->nelems != 0)

  {

    const size_t sz = ref->nelems * sizeof(NC_var *);

    ncap->value = (NC_var **) malloc(sz);

    if(ncap->value == NULL)

      return NC_ENOMEM;

    (void) memset(ncap->value, 0, sz);

    ncap->nalloc = ref->nelems;

  }

  ncap->nelems = 0;

  {

    NC_var **vpp = ncap->value;

    const NC_var **drpp = (const NC_var **)ref->value;

    NC_var *const *const end = &vpp[ref->nelems];

    for( /*NADA*/; vpp < end; drpp++, vpp++, ncap->nelems++)

    {

      *vpp = dup_NC_var(*drpp);

      if(*vpp == NULL)

      {

        status = NC_ENOMEM;

        break;

      }

    }

  }

  if(status != NC_NOERR)

  {

    free_NC_vararrayV(ncap);

    return status;

  }

  assert(ncap->nelems == ref->nelems);

  return NC_NOERR;

}

/*

 * Add a new handle on the end of an array of handles

 * Formerly

NC_incr_array(array, tail)

 */

static int

incr_NC_vararray(NC_vararray *ncap, NC_var *newelemp)

{

  NC_var **vp;

  assert(ncap != NULL);

  if(ncap->nalloc == 0)

  {

    assert(ncap->nelems == 0);

    vp = (NC_var **) malloc(NC_ARRAY_GROWBY * sizeof(NC_var *));

    if(vp == NULL)

      return NC_ENOMEM;

    ncap->value = vp;

    ncap->nalloc = NC_ARRAY_GROWBY;

    ncap->hashmap = NC_hashmapnew(0);

  }

  else if(ncap->nelems +1 > ncap->nalloc)

  {

    vp = (NC_var **) realloc(ncap->value,

      (ncap->nalloc + NC_ARRAY_GROWBY) * sizeof(NC_var *));

    if(vp == NULL)

      return NC_ENOMEM;

    ncap->value = vp;

    ncap->nalloc += NC_ARRAY_GROWBY;

  }

  if(newelemp != NULL)

  {

    NC_hashmapadd(ncap->hashmap, (uintptr_t)ncap->nelems, newelemp->name->cp, strlen(newelemp->name->cp));

    ncap->value[ncap->nelems] = newelemp;

    ncap->nelems++;

  }

  return NC_NOERR;

}

static NC_var *

elem_NC_vararray(const NC_vararray *ncap, size_t elem)

{

  assert(ncap != NULL);

    /* cast needed for braindead systems with signed size_t */

  if(ncap->nelems == 0 || (unsigned long)elem >= ncap->nelems)

    return NULL;

  assert(ncap->value != NULL);

  return ncap->value[elem];

}

/* End vararray per se */

/*

 * Step thru NC_VARIABLE array, seeking match on name.

 * Return varid or -1 on not found.

 * *varpp is set to the appropriate NC_var.

 * Formerly (sort of) NC_hvarid

 */

int

NC_findvar(const NC_vararray *ncap, const char *uname, NC_var **varpp)

{

  int hash_var_id = -1;

  uintptr_t data;

  char *name = NULL;

  assert(ncap != NULL);

  if(ncap->nelems == 0)

      goto done;

  /* normalized version of uname */

        if(nc_utf8_normalize((const unsigned char *)uname,(unsigned char **)&name))

      goto done;

  if(NC_hashmapget(ncap->hashmap, name, strlen(name), &data) == 0)

      goto done;

  hash_var_id = (int)data;

        if (varpp != NULL)

    *varpp = ncap->value[hash_var_id];

done:

  if(name != NULL) free(name);

  return(hash_var_id); /* Normal return */

}

/*

 * For a netcdf type

 *  return the size of one element in the external representation.

 * Note that arrays get rounded up to X_ALIGN boundaries.

 * Formerly

NC_xtypelen

 * See also ncx_len()

 */

size_t

ncx_szof(nc_type type)

{

  switch(type){

  case NC_BYTE:

  case NC_CHAR:

  case NC_UBYTE:

    return(1);

  case NC_SHORT :

    return(2);

  case NC_INT:

    return X_SIZEOF_INT;

  case NC_FLOAT:

    return X_SIZEOF_FLOAT;

  case NC_DOUBLE :

    return X_SIZEOF_DOUBLE;

  case NC_USHORT :

    return X_SIZEOF_USHORT;

  case NC_UINT :

    return X_SIZEOF_UINT;

  case NC_INT64 :

    return X_SIZEOF_INT64;

  case NC_UINT64 :

    return X_SIZEOF_UINT64;

  default:

    /* 37824 Ignore */

          assert("ncx_szof invalid type" == 0);

          return 0;

  }

}

/*

 * 'compile' the shape and len of a variable

 *  Formerly

NC_var_shape(var, dims)

 */

int

NC_var_shape(NC_var *varp, const NC_dimarray *dims)

{

  size_t *shp, *op;

  off_t *dsp;

  int *ip = NULL;

  const NC_dim *dimp;

  off_t product = 1;

  varp->xsz = ncx_szof(varp->type);

  if(varp->ndims == 0 || varp->dimids == NULL)

  {

    goto out;

  }

  /*

   * use the user supplied dimension indices

   * to determine the shape

   */

  for(ip = varp->dimids, op = varp->shape

          ; ip < &varp->dimids[varp->ndims]; ip++, op++)

  {

    if(*ip < 0 || (size_t) (*ip) >= ((dims != NULL) ? dims->nelems : 1) )

      return NC_EBADDIM;

    dimp = elem_NC_dimarray(dims, (size_t)*ip);

    *op = dimp->size;

    if(*op == NC_UNLIMITED && ip != varp->dimids)

      return NC_EUNLIMPOS;

  }

  /*

   * Compute the dsizes

   */

        /* ndims is > 0 here */

  for(shp = varp->shape + varp->ndims -1,

        dsp = varp->dsizes + varp->ndims -1;

      shp >= varp->shape;

      shp--, dsp--)

  {

      /*if(!(shp == varp->shape && IS_RECVAR(varp)))*/

      if( shp != NULL && (shp != varp->shape || !IS_RECVAR(varp)))

    {

          if( ((off_t)(*shp)) <= OFF_T_MAX / product )

      {

              product *= (*shp > 0 ? *shp : 1);

      } else

      {

              product = OFF_T_MAX ;

      }

    }

      *dsp = product;

  }

out :

    /*

     * For CDF-1 and CDF-2 formats, the total number of array elements

     * cannot exceed 2^32, unless this variable is the last fixed-size

     * variable, there is no record variable, and the file starting

     * offset of this variable is less than 2GiB.

     * This will be checked in NC_check_vlens() during NC_endef()

     */

    varp->len = product * varp->xsz;

    if (varp->len % 4 > 0)

        varp->len += 4 - varp->len % 4; /* round up */

#if 0

  arrayp("\tshape", varp->ndims, varp->shape);

  arrayp("\tdsizes", varp->ndims, varp->dsizes);

#endif

  return NC_NOERR;

}

/*

 * Check whether variable size is less than or equal to vlen_max,

 * without overflowing in arithmetic calculations.  If OK, return 1,

 * else, return 0.  For CDF1 format or for CDF2 format on non-LFS

 * platforms, vlen_max should be 2^31 - 4, but for CDF2 format on

 * systems with LFS it should be 2^32 - 4.

 */

int

NC_check_vlen(NC_var *varp, long long vlen_max) {

    size_t ii;

    long long prod=varp->xsz; /* product of xsz and dimensions so far */

    assert(varp != NULL);

    for(ii = IS_RECVAR(varp) ? 1 : 0; ii < varp->ndims; ii++) {

      if(!varp->shape)

        return 0; /* Shape is undefined/NULL. */

      if ((long long)varp->shape[ii] > vlen_max / prod) {

        return 0;   /* size in bytes won't fit in a 32-bit int */

      }

      prod *= varp->shape[ii];

    }

    return 1;     /* OK */

}

/*! Look up a variable by varid.

 *

 * Given a valid ncp structure and varid, return the var.

 *

 * Formerly NC_hlookupvar()

 *

 * @param[in] ncp NC3_INFO data structure.

 * @param[in] varid The varid key for the var we are looking up.

 * @param[out] varp Data structure to contain the varp pointer.

 * @return Error code, if one exists, 0 otherwise.

 */

int NC_lookupvar(NC3_INFO* ncp, int varid, NC_var **varp)

{

  if(varid == NC_GLOBAL)

  {

      /* Global is error in this context */

      return NC_EGLOBAL;

  }

  if(varp)

    *varp = elem_NC_vararray(&ncp->vars, (size_t)varid);

  else

    return NC_ENOTVAR;

  if(*varp == NULL)

    return NC_ENOTVAR;

  return NC_NOERR;

}

/* Public */

int

NC3_def_var( int ncid, const char *name, nc_type type,

   int ndims, const int *dimids, int *varidp)

{

  int status;

  NC *nc;

  NC3_INFO* ncp;

  int varid;

  NC_var *varp = NULL;

  status = NC_check_id(ncid, &nc);

  if(status != NC_NOERR)

    return status;

  ncp = NC3_DATA(nc);

  if(!NC_indef(ncp))

  {

    return NC_ENOTINDEFINE;

  }

  status = NC_check_name(name);

  if(status != NC_NOERR)

    return status;

  status = nc3_cktype(nc->mode, type);

  if(status != NC_NOERR)

    return status;

        if (ndims > NC_MAX_VAR_DIMS) return NC_EMAXDIMS;

    /* cast needed for braindead systems with signed size_t */

  if((unsigned long) ndims > X_INT_MAX) /* Backward compat */

  {

    return NC_EINVAL;

  }

  varid = NC_findvar(&ncp->vars, name, &varp);

  if(varid != -1)

  {

    return NC_ENAMEINUSE;

  }

  varp = new_NC_var(name, type, ndims, dimids);

  if(varp == NULL)

    return NC_ENOMEM;

  status = NC_var_shape(varp, &ncp->dims);

  if(status != NC_NOERR)

  {

    free_NC_var(varp);

    return status;

  }

  status = incr_NC_vararray(&ncp->vars, varp);

  if(status != NC_NOERR)

  {

    free_NC_var(varp);

    return status;

  }

  if(varidp != NULL)

    *varidp = (int)ncp->vars.nelems -1; /* varid */

  /* set the variable's fill mode */

  if (NC_dofill(ncp))

    varp->no_fill = 0;

  else

    varp->no_fill = 1;

  return NC_NOERR;

}

int

NC3_inq_varid(int ncid, const char *name, int *varid_ptr)

{

  int status;

  NC *nc;

  NC3_INFO* ncp;

  NC_var *varp;

  int varid;

  status = NC_check_id(ncid, &nc);

  if(status != NC_NOERR)

    return status;

  ncp = NC3_DATA(nc);

  varid = NC_findvar(&ncp->vars, name, &varp);

  if(varid == -1)

  {

    return NC_ENOTVAR;

  }

  *varid_ptr = varid;

  return NC_NOERR;

}

int

NC3_inq_var(int ncid,

  int varid,

  char *name,

  nc_type *typep,

  int *ndimsp,

  int *dimids,

  int *nattsp,

  int *no_fillp,

  void *fill_valuep)

{

  int status;

  NC *nc;

  NC3_INFO* ncp;

  NC_var *varp;

  size_t ii;

  status = NC_check_id(ncid, &nc);

  if(status != NC_NOERR)

    return status;

  ncp = NC3_DATA(nc);

  varp = elem_NC_vararray(&ncp->vars, (size_t)varid);

  if(varp == NULL)

    return NC_ENOTVAR;

  if(name != NULL)

  {

    (void) strncpy(name, varp->name->cp, varp->name->nchars);

    name[varp->name->nchars] = 0;

  }

  if(typep != 0)

    *typep = varp->type;

  if(ndimsp != 0)

  {

    *ndimsp = (int) varp->ndims;

  }

  if(dimids != 0)

  {

    for(ii = 0; ii < varp->ndims; ii++)

    {

      dimids[ii] = varp->dimids[ii];

    }

  }

  if(nattsp != 0)

  {

    *nattsp = (int) varp->attrs.nelems;

  }

  if (no_fillp != NULL) *no_fillp = varp->no_fill;

  if (fill_valuep != NULL) {

    status = nc_get_att(ncid, varid, _FillValue, fill_valuep);

    if (status != NC_NOERR && status != NC_ENOTATT)

      return status;

    if (status == NC_ENOTATT) {

      status = NC3_inq_default_fill_value(varp->type, fill_valuep);

      if (status != NC_NOERR) return status;

    }

  }

  return NC_NOERR;

}

int

NC3_rename_var(int ncid, int varid, const char *unewname)

{

  int status = NC_NOERR;

  NC *nc;

  NC3_INFO* ncp;

  uintptr_t intdata;

  NC_var *varp;

  NC_string *old, *newStr;

  int other;

  char *newname = NULL; /* normalized */

  status = NC_check_id(ncid, &nc);

  if(status != NC_NOERR)

      goto done;

  ncp = NC3_DATA(nc);

  if(NC_readonly(ncp))

      {status = NC_EPERM; goto done;}

  status = NC_check_name(unewname);

  if(status != NC_NOERR)

      goto done;

  /* check for name in use */

  other = NC_findvar(&ncp->vars, unewname, &varp);

  if(other != -1)

      {status = NC_ENAMEINUSE; goto done;}

  status = NC_lookupvar(ncp, varid, &varp);

  if(status != NC_NOERR)

      goto done; /* invalid varid */

  old = varp->name;

        status = nc_utf8_normalize((const unsigned char *)unewname,(unsigned char **)&newname);

        if(status != NC_NOERR)

      goto done;

  if(NC_indef(ncp))

  {

    /* Remove old name from hashmap; add new... */

          /* WARNING: strlen(NC_string.cp) may be less than NC_string.nchars */

    NC_hashmapremove(ncp->vars.hashmap,old->cp,strlen(old->cp),NULL);

    newStr = new_NC_string(strlen(newname),newname);

    if(newStr == NULL)

        {status = NC_ENOMEM; goto done;}

    varp->name = newStr;

    intdata = (uintptr_t)varid;

    NC_hashmapadd(ncp->vars.hashmap, intdata, varp->name->cp, strlen(varp->name->cp));

    free_NC_string(old);

    goto done;

  }

  /* else, not in define mode */

  /* If new name is longer than old, then complain,

           but otherwise, no change (test is same as set_NC_string)*/

  if(varp->name->nchars < strlen(newname))

      {status = NC_ENOTINDEFINE; goto done;}

  /* WARNING: strlen(NC_string.cp) may be less than NC_string.nchars */

  /* Remove old name from hashmap; add new... */

        NC_hashmapremove(ncp->vars.hashmap,old->cp,strlen(old->cp),NULL);

  /* WARNING: strlen(NC_string.cp) may be less than NC_string.nchars */

  status = set_NC_string(varp->name, newname);

  if(status != NC_NOERR)

    goto done;

  intdata = (uintptr_t)varid;

  NC_hashmapadd(ncp->vars.hashmap, intdata, varp->name->cp, strlen(varp->name->cp));

  set_NC_hdirty(ncp);

  if(NC_doHsync(ncp))

  {

    status = NC_sync(ncp);

    if(status != NC_NOERR)

      goto done;

  }

done:

  if(newname) free(newname);

  return status;

}

int

NC3_def_var_fill(int ncid,

  int varid,

  int no_fill,

  const void *fill_value)

{

  int status;

  NC *nc;

  NC3_INFO* ncp;

  NC_var *varp;

  status = NC_check_id(ncid, &nc);

  if(status != NC_NOERR)

    return status;

  ncp = NC3_DATA(nc);

  if(NC_readonly(ncp))

  {

    return NC_EPERM;

  }

  if(!NC_indef(ncp))

  {

    return NC_ENOTINDEFINE;

  }

  varp = elem_NC_vararray(&ncp->vars, (size_t)varid);

  if(varp == NULL)

    return NC_ENOTVAR;

  if (no_fill)

    varp->no_fill = 1;

  else

    varp->no_fill = 0;

  /* Are we setting a fill value? */

  if (fill_value != NULL && !varp->no_fill) {

    /* If there's a _FillValue attribute, delete it. */

    status = NC3_del_att(ncid, varid, _FillValue);

    if (status != NC_NOERR && status != NC_ENOTATT)

      return status;

    /* Create/overwrite attribute _FillValue */

    status = NC3_put_att(ncid, varid, _FillValue, varp->type, 1, fill_value, varp->type);

    if (status != NC_NOERR) return status;

  }

  return NC_NOERR;

}