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<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">PLoS ONE</journal-id>
<journal-id journal-id-type="publisher-id">plos</journal-id>
<journal-id journal-id-type="pmc">plosone</journal-id>
<journal-title-group>
<journal-title>PLOS ONE</journal-title>
</journal-title-group>
<issn pub-type="epub">1932-6203</issn>
<publisher>
<publisher-name>Public Library of Science</publisher-name>
<publisher-loc>San Francisco, CA USA</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.1371/journal.pone.0155745</article-id>
<article-id pub-id-type="publisher-id">PONE-D-15-41617</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Research Article</subject>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Organisms</subject><subj-group><subject>Animals</subject><subj-group><subject>Vertebrates</subject><subj-group><subject>Amphibians</subject><subj-group><subject>Frogs</subject></subj-group></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Organisms</subject><subj-group><subject>Animals</subject><subj-group><subject>Vertebrates</subject><subj-group><subject>Amphibians</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Microbiology</subject><subj-group><subject>Medical microbiology</subject><subj-group><subject>Microbial pathogens</subject><subj-group><subject>Fungal pathogens</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Medicine and health sciences</subject><subj-group><subject>Pathology and laboratory medicine</subject><subj-group><subject>Pathogens</subject><subj-group><subject>Microbial pathogens</subject><subj-group><subject>Fungal pathogens</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Mycology</subject><subj-group><subject>Fungal pathogens</subject></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Conservation biology</subject><subj-group><subject>Species extinction</subject></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Ecology and environmental sciences</subject><subj-group><subject>Conservation science</subject><subj-group><subject>Conservation biology</subject><subj-group><subject>Species extinction</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Evolutionary biology</subject><subj-group><subject>Evolutionary processes</subject><subj-group><subject>Species extinction</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>People and places</subject><subj-group><subject>Geographical locations</subject><subj-group><subject>North America</subject><subj-group><subject>Central America</subject><subj-group><subject>Costa Rica</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Engineering and technology</subject><subj-group><subject>Civil engineering</subject><subj-group><subject>Transportation infrastructure</subject><subj-group><subject>Canals</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Engineering and technology</subject><subj-group><subject>Transportation</subject><subj-group><subject>Transportation infrastructure</subject><subj-group><subject>Canals</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Earth sciences</subject><subj-group><subject>Marine and aquatic sciences</subject><subj-group><subject>Bodies of water</subject><subj-group><subject>Rivers</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Ecology and environmental sciences</subject><subj-group><subject>Aquatic environments</subject><subj-group><subject>Freshwater environments</subject><subj-group><subject>Rivers</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Earth sciences</subject><subj-group><subject>Marine and aquatic sciences</subject><subj-group><subject>Aquatic environments</subject><subj-group><subject>Freshwater environments</subject><subj-group><subject>Rivers</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Ecology</subject><subj-group><subject>Ecosystems</subject><subj-group><subject>Forests</subject><subj-group><subject>Rainforests</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Ecology and environmental sciences</subject><subj-group><subject>Ecology</subject><subj-group><subject>Ecosystems</subject><subj-group><subject>Forests</subject><subj-group><subject>Rainforests</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Ecology and environmental sciences</subject><subj-group><subject>Terrestrial environments</subject><subj-group><subject>Forests</subject><subj-group><subject>Rainforests</subject></subj-group></subj-group></subj-group></subj-group></article-categories>
<title-group>
<article-title>Spread of Amphibian Chytrid Fungus across Lowland Populations of Túngara Frogs in Panamá</article-title>
<alt-title alt-title-type="running-head">Amphibian Chytrid Spreads across Tropical Lowlands</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes" xlink:type="simple">
<name name-style="western">
<surname>Rodríguez-Brenes</surname>
<given-names>Sofía</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup></xref>
<xref ref-type="corresp" rid="cor001">*</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple">
<name name-style="western">
<surname>Rodriguez</surname>
<given-names>David</given-names>
</name>
<xref ref-type="aff" rid="aff002"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple">
<name name-style="western">
<surname>Ibáñez</surname>
<given-names>Roberto</given-names>
</name>
<xref ref-type="aff" rid="aff003"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff004"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple">
<name name-style="western">
<surname>Ryan</surname>
<given-names>Michael J.</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff003"><sup>3</sup></xref>
</contrib>
</contrib-group>
<aff id="aff001"><label>1</label> <addr-line>Department of Integrative Biology, University of Texas, Austin, Texas, United States of America</addr-line></aff>
<aff id="aff002"><label>2</label> <addr-line>Department of Biology, Texas State University, San Marcos, Texas, United States of America</addr-line></aff>
<aff id="aff003"><label>3</label> <addr-line>Smithsonian Tropical Research Institute, Balboa, Panamá</addr-line></aff>
<aff id="aff004"><label>4</label> <addr-line>Departamento de Zoología, Universidad de Panamá, Panamá, Panamá</addr-line></aff>
<contrib-group>
<contrib contrib-type="editor" xlink:type="simple">
<name name-style="western">
<surname>Rollins-Smith</surname>
<given-names>Louise A.</given-names>
</name>
<role>Editor</role>
<xref ref-type="aff" rid="edit1"/>
</contrib>
</contrib-group>
<aff id="edit1"><addr-line>Vanderbilt University School of Medicine, UNITED STATES</addr-line></aff>
<author-notes>
<fn fn-type="conflict" id="coi001">
<p>The authors have declared that no competing interests exist.</p>
</fn>
<fn fn-type="con" id="contrib001">
<p>Conceived and designed the experiments: SRB MJR. Performed the experiments: SRB MJR RI DR. Analyzed the data: SRB DR RI. Contributed reagents/materials/analysis tools: SRB MJR DR RI. Wrote the paper: SRB MJR DR RI.</p>
</fn>
<corresp id="cor001">* E-mail: <email xlink:type="simple">sofiarb@utexas.edu</email></corresp>
</author-notes>
<pub-date pub-type="epub">
<day>13</day>
<month>5</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="collection">
<year>2016</year>
</pub-date>
<volume>11</volume>
<issue>5</issue>
<elocation-id>e0155745</elocation-id>
<history>
<date date-type="received">
<day>29</day>
<month>9</month>
<year>2015</year>
</date>
<date date-type="accepted">
<day>3</day>
<month>5</month>
<year>2016</year>
</date>
</history>
<permissions>
<copyright-year>2016</copyright-year>
<copyright-holder>Rodríguez-Brenes et al</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/" xlink:type="simple">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/" xlink:type="simple">Creative Commons Attribution License</ext-link>, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri content-type="pdf" xlink:href="info:doi/10.1371/journal.pone.0155745"/>
<abstract>
<p>Chytridiomycosis, caused by the fungal pathogen <italic>Batrachochytrium dendrobatidis</italic> (<italic>Bd</italic>), is an emergent infectious disease partially responsible for worldwide amphibian population declines. The spread of <italic>Bd</italic> along highland habitats (&gt; 500 meters above sea level, m a.s.l.) of Costa Rica and Panamá is well documented and has been linked to amphibian population collapses. In contrast, data are scarce on the prevalence and dispersal of <italic>Bd</italic> in lowland habitats where amphibians may be infected but asymptomatic. Here we describe the spread (2009 to 2014) of <italic>Bd</italic> across lowland habitats east of the Panamá Canal (&lt; 500 m a.s.l.) with a focus on the Túngara frog (<italic>Physalaemus [Engystomops] pustulosus</italic>), one of the most common and abundant frog species in this region. Highland populations in western Panamá were already infected with <italic>Bd</italic> at the start of the study, which was consistent with previous studies indicating that <italic>Bd</italic> is enzootic in this region. In central Panamá, we collected the first positive samples in 2010, and by 2014, we detected <italic>Bd</italic> from remote sites in eastern Panamá (Darién National Park). We discuss the importance of studying <italic>Bd</italic> in lowland species, which may serve as potential reservoirs and agents of dispersal of <italic>Bd</italic> to highland species that are more susceptible to chytridiomycosis.</p>
</abstract>
<funding-group>
<award-group id="award001">
<funding-source>
<institution-wrap>
<institution-id institution-id-type="funder-id">http://dx.doi.org/10.13039/100000076</institution-id>
<institution>Directorate for Biological Sciences</institution>
</institution-wrap>
</funding-source>
<award-id>IBN 0517328</award-id>
<principal-award-recipient>
<name name-style="western">
<surname>Ryan</surname>
<given-names>Michael J.</given-names>
</name>
</principal-award-recipient>
</award-group>
<funding-statement>This work was funded by National Science Foundation (<ext-link ext-link-type="uri" xlink:href="http://www.nsf.gov/" xlink:type="simple">http://www.nsf.gov/</ext-link>), IBN 0517328 to MJR. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</funding-statement>
</funding-group>
<counts>
<fig-count count="1"/>
<table-count count="1"/>
<page-count count="8"/>
</counts>
<custom-meta-group>
<custom-meta id="data-availability">
<meta-name>Data Availability</meta-name>
<meta-value>All data are available from the DRYAD Digital Repository (doi:<ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.5061/dryad.6bp92" xlink:type="simple">10.5061/dryad.6bp92</ext-link>).</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
</front>
<body>
<sec id="sec001" sec-type="intro">
<title>Introduction</title>
<p>Wildlife extinctions are not typically attributed to infectious diseases, yet there are a few examples showing pathogens as the direct cause of local extinctions [<xref ref-type="bibr" rid="pone.0155745.ref001">1</xref>–<xref ref-type="bibr" rid="pone.0155745.ref003">3</xref>]. Some of them have been linked to chytridiomycosis, an emerging infectious disease [<xref ref-type="bibr" rid="pone.0155745.ref004">4</xref>,<xref ref-type="bibr" rid="pone.0155745.ref005">5</xref>]. In amphibians, chytridiomycosis results from a skin infection caused by the chytrid fungus <italic>Batrachochytrium dendrobatidis</italic> (<italic>Bd</italic>). In the tropics, the most severe declines have been documented in comparatively cooler and humid areas above 500 m [<xref ref-type="bibr" rid="pone.0155745.ref006">6</xref>], most likely because lower temperatures (17–25°C) are optimal for <italic>Bd</italic> growth and water facilitates the propagation and dispersal of the aquatic, flagellated <italic>Bd</italic> zoospores [<xref ref-type="bibr" rid="pone.0155745.ref007">7</xref>]. Although the rapid spread of <italic>Bd</italic> into apparently <italic>Bd</italic>-free areas throughout the world is well-documented [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>–<xref ref-type="bibr" rid="pone.0155745.ref012">12</xref>], the process by which <italic>Bd</italic> spreads is still not clearly understood [<xref ref-type="bibr" rid="pone.0155745.ref013">13</xref>].</p>
<p><italic>Bd</italic> has rapidly spread throughout the highlands of Central America. In the late 1980s, the disappearance of golden toads (<italic>Incilius periglenes</italic>) and declines of other anuran populations in the protected cloud forest of Monteverde, Costa Rica (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>), were the first alerts to what later became a predictable pattern of declines spreading towards Panamá [<xref ref-type="bibr" rid="pone.0155745.ref014">14</xref>,<xref ref-type="bibr" rid="pone.0155745.ref015">15</xref>]. Shortly thereafter, between 1993 and 1997 additional cases of amphibian population declines or extinctions were reported in the highlands close to the border with Panamá at Las Tablas, Costa Rica, and Fortuna, Panamá (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>)[<xref ref-type="bibr" rid="pone.0155745.ref016">16</xref>,<xref ref-type="bibr" rid="pone.0155745.ref017">17</xref>]. The sites experiencing population declines were located at altitudes above 500 m, and the fastest declining species were stream dwellers with aquatic tadpoles [<xref ref-type="bibr" rid="pone.0155745.ref006">6</xref>]. <italic>Bd</italic> was spreading west to east in a wave like pattern [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>]. High elevation sites in western and central Panamá were then intensively studied prior to and during the arrival of <italic>Bd</italic>, these studies documented amphibian population declines after the arrival of <italic>Bd</italic> in this region (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>)[<xref ref-type="bibr" rid="pone.0155745.ref016">16</xref>–<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>].</p>
<fig id="pone.0155745.g001" position="float">
<object-id pub-id-type="doi">10.1371/journal.pone.0155745.g001</object-id>
<label>Fig 1</label>
<caption>
<title>Sites where <italic>Bd</italic> has been detected in the past (filled circles), and sites where we sampled Túngara frog <italic>(Physalaemus [Engystomops] pustulosus)</italic> populations (open triangles).</title>
<p>Year in parenthesis corresponds to year of decline or the year that <italic>Bd</italic> was first detected.</p>
</caption>
<graphic mimetype="image" position="float" xlink:href="info:doi/10.1371/journal.pone.0155745.g001" xlink:type="simple"/>
</fig>
<p>Only two studies have investigated <italic>Bd</italic> infection spread in eastern Panamá. Rebollar et al. [<xref ref-type="bibr" rid="pone.0155745.ref020">20</xref>] sampled populations along the lowlands of east Panamá, and Woodhams et al. [<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>] sampled sites in central Panamá. These studies did not detect a clear pattern of wave-like spread from west to east as observed in the highlands of Panamá. It is also possible that another wave of <italic>Bd</italic> from South America crossed into Panamá [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>]. Currently, the dynamics of <italic>Bd</italic> spread in the lowlands of Panamá, where environmental conditions are not ideal for <italic>Bd</italic>, are still unclear and require additional investigation.</p>
<p>Evaluating the spread of a pathogen in a single, abundant, and well-characterized host can help to predict spread dynamics while controlling for host phylogenetic diversity. The Túngara frog (<italic>Physalaemus [Engystomops] pustulosus</italic>) is a common species occupying lowland habitats ranging from Mexico to Colombia, Venezuela, and a small portion of the Guyana Shield. Its range parallels many highland regions where <italic>Bd</italic> and amphibian declines have been extensively documented [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>–<xref ref-type="bibr" rid="pone.0155745.ref013">13</xref>]. The adults and tadpoles of this species use both permanent and ephemeral bodies of water in habitats ranging from urban areas to pristine forests. Thus, the Túngara frog is an ideal species in which to characterize the spread of <italic>Bd</italic> through populations of a lowland host. Here, we (i) report the <italic>Bd</italic> infection of túngara frogs at two sites west of the Panamá Canal where <italic>Bd</italic> is enzootic, and (ii) present data documenting the spread of <italic>Bd</italic> in the lowlands of central and east Panamá from 2009 to 2014.</p>
</sec>
<sec id="sec002" sec-type="materials|methods">
<title>Methods</title>
<p>We sampled Túngara frog populations in Panamá from 2009 to 2014, each year during the rainy season (June to November), which falls within their reproductive season. In most cases, populations were sampled during two reproductive seasons. Lowland sites in east and central Panamá ranged from 12 to 67 m in altitude (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>). We also sampled highland populations at El Valle (elevation 600 m; <xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>) in central Panamá, and at Chiriquí near the town of Cuesta de Piedra (elevation 460–967 m; <xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>) in western Panamá. This altitude is the highest known Túngara population in Panamá. Chiriquí was also our western most site and was located 30 km east of sites where other amphibian species experienced declines in 1993 [<xref ref-type="bibr" rid="pone.0155745.ref017">17</xref>].</p>
<p>In central Panamá, we sampled two lowland sites east of the Panamá Canal, Gamboa and Summit, ranging from 46 to 98 m in elevation (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>). These two lowland sites are located on the eastern side of the Panamá Canal but are separated by the Chagres River. Gamboa is a small town north of the river that is surrounded by rainforest. Here we included Pipeline Road, which intersects a protected rainforest in the Soberanía National Park. Summit is located south of the river and includes portions of the Soberanía National Park. We sampled along the main road, on trails and dirt roads within the National Park.</p>
<p>In east Panamá, we sampled four sites. Metetí and Yaviza are located along and at the very end of the Inter-American Highway, respectively (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>). Here, we sampled disturbed, deforested habitats, in puddles on dirt roads and cattle ranches. Further east, along the Tuira River, we sampled at El Real (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>), a small town surrounded by less disturbed habitat and in Darién National Park. In Darién National Park, we sampled around the Rancho Frío field station (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>) at an average of 50 m of elevation. This site is predominantly primary rainforest with a tall canopy, thick lianas and an understory dominated by palms.</p>
<sec id="sec003">
<title>Time scale of surveys</title>
<p>We first sampled El Valle in 2009 and then Chiriquí in 2010, where <italic>Bd</italic> is thought to have arrived in the mid-1990s according to previous estimations [<xref ref-type="bibr" rid="pone.0155745.ref013">13</xref>]. In 2010, we also sampled Gamboa and Summit in central Panamá. Woodhams et al. [<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>] reported <italic>Bd</italic> in Summit in 2007. We then sampled Metetí and Yaviza in eastern Panamá during 2011, where we expected the front of the <italic>Bd</italic> wave to be just arriving. In 2013, we sampled all the populations previously surveyed. In 2014 we sampled in Gamboa, Yaviza and finally Darién National Park, which was the eastern most site and where we expected <italic>P</italic>. <italic>pustulosus</italic> populations to be <italic>Bd</italic> naive.</p>
</sec>
<sec id="sec004">
<title><italic>Bd</italic> sampling</title>
<p>We toe-clipped individuals to avoid recapture. To avoid cross contamination, we captured adults by hand using a new pair of nitrile gloves for each individual and kept them isolated in a plastic bag until processing. We swabbed the ventral area using a sterile cotton tip dry swab (Medical Wire &amp; Equipment, model MW113 and MW110) following established procedures [<xref ref-type="bibr" rid="pone.0155745.ref021">21</xref>]. Swabs were stored in 90% ethanol or they were kept frozen until extraction, thus we expect no effects of sample storage on estimates of prevalence or infection intensity [<xref ref-type="bibr" rid="pone.0155745.ref022">22</xref>]. To avoid potential cross-contamination between sites, we bleached our rubber boots and vehicle tires and then rinsed them with tap water before leaving the collection site.</p>
</sec>
<sec id="sec005">
<title>Real time quantitative PCR</title>
<p>To determine the prevalence of <italic>Bd</italic> in each population and the intensity of infection for individual frogs, we processed the swabs using quantitative PCR (qPCR) following the protocol developed by Boyle et al. [<xref ref-type="bibr" rid="pone.0155745.ref023">23</xref>] and modified by Kriger et al. [<xref ref-type="bibr" rid="pone.0155745.ref024">24</xref>]. For samples collected from 2009 to 2012, we used a Roche LightCycler 480 system with a high confidence setting to detect positive samples. For samples collected during 2009–2010, we did not quantify the number of zoospores due to lack of <italic>Bd</italic> standards. For samples collected during 2013 and 2014, we used TaqMan® Fast Advanced Master Mix (Applied Biosystems) and a StepOnePlus™ system. We used a dilution series of genomic DNA from strain JEL423 as our standard reference for the estimations of infection intensity in samples collected from 2011 to 2014. We calculated prevalence by using the ratio of positive samples to total samples per population and calculated 95% binomial confidence intervals. For each population, we calculated average infection intensity using the average number of zoospore equivalents (z.e.) inferred from qPCR among positive individuals.</p>
<p>To calculate the rate of <italic>Bd</italic> spread across sites east of the Canal, we used the distance between sites and the year we first detected infected frogs. We sampled frogs from June to November. If <italic>Bd</italic> arrived after sampling was completed for a given year, then we would have detected it the following year. We could not calculate the rate of spread in western Panamá because <italic>Bd</italic> was already present at the beginning of our sampling period. Thus, we approximated when Túngara frogs were first infected based on historical reports for sites near Chiriquí [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>,<xref ref-type="bibr" rid="pone.0155745.ref013">13</xref>,<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>].</p>
</sec>
<sec id="sec006">
<title>Ethical approval</title>
<p>All applicable institutional and/or national guidelines for the care and use of animals were followed. The protocol was approved by the Institutional Animal Care and Use Committee of the Smithsonian Tropical Research Institute (protocol number: 2011-0825-2014-02), and by the Autoridad Nacional del Ambiente (permit numbers: SE/A-81-09, SE/A-73-10, SE/A-48-10, SC/A-28-11, SE/A-83-11, SE/A-42-11, SE/A-30-12, SE/A-47-13, SC/A-9-14)</p>
</sec>
</sec>
<sec id="sec007" sec-type="results">
<title>Results</title>
<p>In total, we sampled 1695 <italic>P</italic>. <italic>pustulosus</italic> adults across Panamá from 2009 to 2014 (<xref ref-type="fig" rid="pone.0155745.g001">Fig 1</xref>). Sample size, prevalence, and 95% binomial confidence intervals are shown in <xref ref-type="table" rid="pone.0155745.t001">Table 1</xref>. We considered sites with sample sizes greater than 60 individuals and no positive samples as <italic>Bd</italic>-negative [<xref ref-type="bibr" rid="pone.0155745.ref025">25</xref>]. The site Chiriquí, in western Panamá, was positive for <italic>Bd</italic> in 2010 and 2013. In central Panamá, El Valle was positive for <italic>Bd</italic> in 2009. In 2010, Gamboa samples were negative for <italic>Bd</italic>, but Summit, which is only 8 km to the south, was positive. <italic>Bd</italic> reached Gamboa in 2011, and in following years we detected <italic>Bd</italic> positive samples in both Summit and Gamboa. By 2014, prevalence had reached 26% in Gamboa (<xref ref-type="table" rid="pone.0155745.t001">Table 1</xref>). Populations in Metetí were <italic>Bd</italic> naive in 2011 but positive in 2013. Farther east, Yaviza was naive for <italic>Bd</italic> in 2013, but by 2014 prevalence reached approximately 6%. By 2014, <italic>Bd</italic> was also present in <italic>P</italic>. <italic>pustulosus</italic> populations from El Real and Rancho Frío, Darién National Park (<xref ref-type="table" rid="pone.0155745.t001">Table 1</xref>).</p>
<table-wrap id="pone.0155745.t001" position="float">
<object-id pub-id-type="doi">10.1371/journal.pone.0155745.t001</object-id>
<label>Table 1</label> <caption><title><italic>Bd</italic> prevalence and infection intensity per site and year in Túngara frog (<italic>Physalaemus [Engystomops] pustulosus</italic>) populations sampled in this study (n = number of individuals sampled; Positive = number of individuals detected positive for <italic>Bd</italic>; 95% CI = 95% binomial distribution confidence intervals; Average intensity = average of number of zoospore equivalents in infected frogs per population).</title> <p>Sites are arranged west to east by longitude.</p></caption>
<alternatives>
<graphic id="pone.0155745.t001g" mimetype="image" position="float" xlink:href="info:doi/10.1371/journal.pone.0155745.t001" xlink:type="simple"/>
<table>
<colgroup>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
</colgroup>
<thead>
<tr>
<th align="center">Site</th>
<th align="center">Year</th>
<th align="center">N</th>
<th align="center">Positive</th>
<th align="center">Prevalence % (95% CI)</th>
<th align="center">Average Intensity (± St.Dev)</th>
</tr>
</thead>
<tbody>
<tr>
<td align="center">Chiriquí</td>
<td align="center">2010</td>
<td align="center">41</td>
<td align="center">11</td>
<td align="center">27 (14–43)</td>
<td align="center">data not available</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2013</td>
<td align="center">38</td>
<td align="center">16</td>
<td align="center">42 (26–60)</td>
<td align="center">3570 (± 12454)</td>
</tr>
<tr>
<td align="center">El Valle</td>
<td align="center">2009</td>
<td align="center">5</td>
<td align="center">3</td>
<td align="center">60 (15–95)</td>
<td align="center">data not available</td>
</tr>
<tr>
<td align="center">Gamboa</td>
<td align="center">2010</td>
<td align="center">321</td>
<td align="center">0</td>
<td align="center">0 (0–0.5)</td>
<td align="center">0</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2011</td>
<td align="center">111</td>
<td align="center">7</td>
<td align="center">6 (3–13)</td>
<td align="center">86 (± 117)</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2012</td>
<td align="center">205</td>
<td align="center">26</td>
<td align="center">13 (8–18)</td>
<td align="center">1617 (± 5485)</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2013</td>
<td align="center">166</td>
<td align="center">35</td>
<td align="center">21 (15–29)</td>
<td align="center">536 (± 2061)</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2014</td>
<td align="center">84</td>
<td align="center">22</td>
<td align="center">26 (17–37)</td>
<td align="center">209 (± 833)</td>
</tr>
<tr>
<td align="center">Summit</td>
<td align="center">2010</td>
<td align="center">12</td>
<td align="center">2</td>
<td align="center">17 (2–48)</td>
<td align="center">data not available</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2011</td>
<td align="center">108</td>
<td align="center">2</td>
<td align="center">2 (0–6)</td>
<td align="center">10 (± 7)</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2013</td>
<td align="center">120</td>
<td align="center">17</td>
<td align="center">14 (9–22)</td>
<td align="center">89 (± 193)</td>
</tr>
<tr>
<td align="center">Metetí</td>
<td align="center">2011</td>
<td align="center">91</td>
<td align="center">0</td>
<td align="center">0 (0–4)</td>
<td align="center">0</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2013</td>
<td align="center">94</td>
<td align="center">2</td>
<td align="center">2 (0–8)</td>
<td align="center">7 (± 3)</td>
</tr>
<tr>
<td align="center">Yaviza</td>
<td align="center">2013</td>
<td align="center">68</td>
<td align="center">0</td>
<td align="center">0 (0–0.5)</td>
<td align="center">0</td>
</tr>
<tr>
<td align="center"/>
<td align="center">2014</td>
<td align="center">41</td>
<td align="center">3</td>
<td align="center">7 (2–20)</td>
<td align="center">6 (± 1)</td>
</tr>
<tr>
<td align="center">El Real</td>
<td align="center">2014</td>
<td align="center">40</td>
<td align="center">2</td>
<td align="center">5 (1–17)</td>
<td align="center">6 (± 1)</td>
</tr>
<tr>
<td align="center">Rancho Frío</td>
<td align="center">2014</td>
<td align="center">150</td>
<td align="center">11</td>
<td align="center">7 (4–13)</td>
<td align="center">48 (± 101)</td>
</tr>
</tbody>
</table>
</alternatives>
</table-wrap>
<sec id="sec008">
<title>Rates of spread of <italic>Bd</italic> in Túngara frogs</title>
<p>If <italic>Bd</italic> spread eastward from Summit in central Panamá to Darién in eastern Panamá, then the front moved at an average rate of 54 km/year among these lowland Túngara frog populations. The rates of spread, however, vary substantially. Specifically, our data suggest that it took approximately one year for <italic>Bd</italic> to move the 8 km distance between Summit and Gamboa, which are separated by the Chagres River. In contrast, the rate of <italic>Bd</italic> spread from Summit to Metetí was 65 km/year, and 42 km/year from Metetí to Yaviza.</p>
<p>All data are available from the DRYAD Digital Repository (doi:<ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.5061/dryad.6bp92" xlink:type="simple">10.5061/dryad.6bp92</ext-link>).</p>
</sec>
</sec>
<sec id="sec009" sec-type="conclusions">
<title>Discussion</title>
<p>Data for the spread of <italic>Bd</italic> in the lowlands of Middle America are scarce. Here we estimated the rate of spread of <italic>Bd</italic> in Túngara frogs based on the first detection of <italic>Bd</italic>, and we assumed that <italic>Bd</italic> spread in a wave-like fashion [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>]. In the lowlands of Panamá, <italic>Bd</italic> spread at a similar rate among Túngara frogs (54 km/year) when compared to other amphibian species tested in this area (30–174 km/year) [<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>]. There was one exception. The rate of spread from Summit across the Chagres River to Gamboa was slower than the average (8 km/year).</p>
<p>In western Panamá, we sampled in Chiriquí, at elevations where amphibian population declines have been severe in the past [<xref ref-type="bibr" rid="pone.0155745.ref016">16</xref>]. Since <italic>Bd</italic> is now enzootic in this area [<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>] and at El Valle in central Panamá, it is not surprising that the Túngara frog populations from Chiriquí and El Valle were positive in 2010, and 2009, respectively. We also found the highest average loads of <italic>Bd</italic> in Chiriquí (3570 z.e., <xref ref-type="table" rid="pone.0155745.t001">Table 1</xref>). We could not estimate the rate of <italic>Bd</italic> dispersal among Túngara frog populations between Chiriquí and El Valle as they were already infected at the time we sampled. In 2007, Woodhams et al. [<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>] reported <italic>Bd</italic> positive individuals (30% prevalence) among three species at Soberanía National Park, including the Summit area where we sampled in 2010, and they suggested that <italic>Bd</italic> was already enzootic during their study. In the same year, Gamboa, was still naive and we most likely sampled before <italic>Bd</italic> arrived. In 2011, we detected <italic>Bd</italic> at Gamboa for the first time, one year earlier than previously reported for this area [<xref ref-type="bibr" rid="pone.0155745.ref020">20</xref>].</p>
<p>We cannot discern whether the source of infection of the Gamboa populations was from Summit Túngara frogs or from other species of frogs in Gamboa. Regardless, there is a relatively large time lag between when <italic>Bd</italic> was detected in Túngara frogs from Gamboa compared to when <italic>Bd</italic> was first detected in Túngara frogs from Summit. The mechanism by which <italic>Bd</italic> spreads is unknown, but it has been suggested that <italic>Bd</italic> could survive and could be carried in mud, and thus easily dispersed by humans [<xref ref-type="bibr" rid="pone.0155745.ref026">26</xref>]. In Túngara frogs, <italic>Bd</italic> did not spread as fast as expected from Summit to Gamboa, which are only 8 km apart and connected by a well-traveled road and bridge over the Chagres River.</p>
<p>Certain geographic features, like rivers, could impede the spread of <italic>Bd</italic>. The Chagres River, which is about 100 m wide and has water all year long, separates Gamboa and Summit. Genetic studies demonstrate that the Chagres River is a geographical barrier for gene flow between Túngara frog populations [<xref ref-type="bibr" rid="pone.0155745.ref027">27</xref>], thus it is possible that limited migration between these populations could slow the spread of <italic>Bd</italic> whether Túngara frogs contracted <italic>Bd</italic> from conspecifics or heterospecifics. <italic>Bd</italic> does seem to have spread rapidly in the lowlands towards eastern Panamá. An alternative explanation for the spread of <italic>Bd</italic> from east to west throughout all of Panamá is that populations in Darién, and elsewhere in far eastern Panamá, were infected by a wave coming from the south [<xref ref-type="bibr" rid="pone.0155745.ref008">8</xref>]. These two scenarios should be tested through a phylogenetic analysis of <italic>Bd</italic> throughout the Túngara frog's range in Central and South America. As such data are currently unavailable, it is difficult to determine the recent origin of <italic>Bd</italic> in eastern Panamá; therefore, our estimates of rate of spread should be viewed with this potential caveat in mind.</p>
<p>Woodhams <italic>et al</italic>. [<xref ref-type="bibr" rid="pone.0155745.ref019">19</xref>] conservatively estimated that <italic>Bd</italic> spread east and would have reached Tortí in September of 2012, but [<xref ref-type="bibr" rid="pone.0155745.ref028">28</xref>] reported two positives out of 93 samples of other species of frogs at this site in 2010. There are no other published reports on the presence of <italic>Bd</italic> among amphibian species from this specific area. In 2011, we sampled in Metetí, approximately 70 km southeast of Tortí, and found this site to be <italic>Bd</italic> naive. Rebollar <italic>et al</italic>. [<xref ref-type="bibr" rid="pone.0155745.ref020">20</xref>] recorded <italic>Bd</italic> positive samples from Nuevo Vigía in 2012, just 26 km east of Metetí, where we detected low <italic>Bd</italic> prevalence in 2013, thus supporting a wave-like <italic>Bd</italic> spread from west to east in Túngara frogs.</p>
<p>Species that carry <italic>Bd</italic> asymptomatically and share the habitat with more vulnerable species can potentially function as <italic>Bd</italic> spreaders. Túngara frog population declines have not been reported and were not evident during our study. If the prevalence and dispersal of <italic>Bd</italic> is density dependent, then the spread of <italic>Bd</italic> along the lowlands might be enhanced by abundant and apparently resistant species serving as reservoirs. Túngara frogs are known to disperse between breeding sites at distances up to 200 m [<xref ref-type="bibr" rid="pone.0155745.ref029">29</xref>]. They also share the habitat with a wide variety of species; thus, they could contribute to the rapid dispersal of <italic>Bd</italic> if they are effective carriers. Moreover, if most species in the lowlands are less susceptible to <italic>Bd</italic> or <italic>Bd</italic> is less virulent [<xref ref-type="bibr" rid="pone.0155745.ref007">7</xref>], then the high diversity and abundance of hosts could further facilitate the dispersal of <italic>Bd</italic>.</p>
<p>Chytridiomycosis is linked to some of the most severe population declines and extinctions of wildlife yet recorded. While substantial efforts have been aimed at understanding the spread and pathogenicity in the more vulnerable highland frog species, we know relatively little about the dynamics of <italic>Bd</italic> in tropical lowland regions of the world. Lowland species, however, could be reservoirs and dispersal agents between areas where amphibian species are more vulnerable to <italic>Bd</italic> infection. As highlighted by our results, even though lowland regions are typically characterized by less favorable climatic conditions for <italic>Bd</italic> [<xref ref-type="bibr" rid="pone.0155745.ref007">7</xref>], by harboring asymptomatic <italic>B</italic>d infections, lowland amphibian populations could potentially play an important role in the spread of <italic>Bd</italic> across tropical regions.</p>
</sec>
</body>
<back>
<ack>
<p>For help in the field we thank Emma and Lucy Ryan, Tony Alexander, Alex Jordan, Meghan Still, Ty Hoskin, Mahudy Díaz, Samuel Sucre, and for logistical support we thank SENAFRONT, ANAM, and STRI. We thank Teofil Nakov and Robert Puschendorf for comments on the manuscript. We also thank Michael R.J. Forstner at Texas State University for instrumentation support, and Mahudy Díaz at STRI for laboratory assistance.</p>
</ack>
<ref-list>
<title>References</title>
<ref id="pone.0155745.ref001"><label>1</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>MacPhee</surname> <given-names>RDE</given-names></name>, <name name-style="western"><surname>Greenwood</surname> <given-names>AD</given-names></name>. <article-title>Infectious disease, endangerment, and extinction</article-title>. <source>Int J Evol Biol</source>. <year>2013</year> <month>Jan</month> <day>16</day>;<volume>2013</volume>:<fpage>e571939</fpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref002"><label>2</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>McCallum</surname> <given-names>H</given-names></name>. <article-title>Disease and the dynamics of extinction</article-title>. <source>Philos Trans R Soc B Biol Sci</source>. <year>2012</year> <month>Oct</month> <day>19</day>;<volume>367</volume>(<issue>1604</issue>):<fpage>2828</fpage>–<lpage>39</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref003"><label>3</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Smith</surname> <given-names>KF</given-names></name>, <name name-style="western"><surname>Sax</surname> <given-names>DF</given-names></name>, <name name-style="western"><surname>Lafferty</surname> <given-names>KD</given-names></name>. <article-title>Evidence for the role of infectious disease in species extinction and endangerment</article-title>. <source>Conserv Biol</source>. <year>2006</year> <month>Oct</month> <day>1</day>;<volume>20</volume>(<issue>5</issue>):<fpage>1349</fpage>–<lpage>57</lpage>. <object-id pub-id-type="pmid">17002752</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref004"><label>4</label><mixed-citation publication-type="book" xlink:type="simple"><name name-style="western"><surname>Collins</surname> <given-names>JP</given-names></name>, <name name-style="western"><surname>Crump</surname> <given-names>ML</given-names></name>. <source>Extinction in Our Times: Global Amphibian Decline</source>. <publisher-name>Oxford University Press</publisher-name>; <year>2009</year>. 477 p.</mixed-citation></ref>
<ref id="pone.0155745.ref005"><label>5</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Fisher</surname> <given-names>MC</given-names></name>, <name name-style="western"><surname>Henk</surname> <given-names>DA</given-names></name>, <name name-style="western"><surname>Briggs</surname> <given-names>CJ</given-names></name>, <name name-style="western"><surname>Brownstein</surname> <given-names>JS</given-names></name>, <name name-style="western"><surname>Madoff</surname> <given-names>LC</given-names></name>, <name name-style="western"><surname>McCraw</surname> <given-names>SL</given-names></name>, <etal>et al</etal>. <article-title>Emerging fungal threats to animal, plant and ecosystem health</article-title>. <source>Nature</source>. <year>2012</year> <month>Apr</month> <day>12</day>;<volume>484</volume>(<issue>7393</issue>):<fpage>186</fpage>–<lpage>94</lpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1038/nature10947" xlink:type="simple">10.1038/nature10947</ext-link></comment> <object-id pub-id-type="pmid">22498624</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref006"><label>6</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Brem</surname> <given-names>FMR</given-names></name>, <name name-style="western"><surname>Lips</surname> <given-names>KR</given-names></name>. <article-title><italic>Batrachochytrium dendrobatidis</italic> infection patterns among Panamanian amphibian species, habitats and elevations during epizootic and enzootic stages</article-title>. <source>Dis Aquat Organ</source>. <year>2008</year> <month>Sep</month> <day>24</day>;<volume>81</volume>(<issue>3</issue>):<fpage>189</fpage>–<lpage>202</lpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.3354/dao01960" xlink:type="simple">10.3354/dao01960</ext-link></comment> <object-id pub-id-type="pmid">18998584</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref007"><label>7</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Piotrowski</surname> <given-names>JS</given-names></name>, <name name-style="western"><surname>Annis</surname> <given-names>SL</given-names></name>, <name name-style="western"><surname>Longcore</surname> <given-names>JE</given-names></name>. <article-title>Physiology of <italic>Batrachochytrium dendrobatidis</italic>, a chytrid pathogen of amphibians</article-title>. <source>Mycologia</source>. <year>2004</year> <month>Jan</month> <day>1</day>;<volume>96</volume>(<issue>1</issue>):<fpage>9</fpage>–<lpage>15</lpage>. <object-id pub-id-type="pmid">21148822</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref008"><label>8</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Lips</surname> <given-names>KR</given-names></name>, <name name-style="western"><surname>Diffendorfer</surname> <given-names>J</given-names></name>, <name name-style="western"><surname>Mendelson</surname> <given-names>JR</given-names></name>, <name name-style="western"><surname>Sears</surname> <given-names>MW</given-names></name>. <article-title>Riding the wave: reconciling the roles of disease and climate change in amphibian declines</article-title>. <source>PLoS Biol</source>. <year>2008</year> <month>Mar</month>;<volume>6</volume>(<issue>3</issue>):<fpage>e72</fpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1371/journal.pbio.0060072" xlink:type="simple">10.1371/journal.pbio.0060072</ext-link></comment> <object-id pub-id-type="pmid">18366257</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref009"><label>9</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Farrer</surname> <given-names>RA</given-names></name>, <name name-style="western"><surname>Weinert</surname> <given-names>LA</given-names></name>, <name name-style="western"><surname>Bielby</surname> <given-names>J</given-names></name>, <name name-style="western"><surname>Garner</surname> <given-names>TWJ</given-names></name>, <name name-style="western"><surname>Balloux</surname> <given-names>F</given-names></name>, <name name-style="western"><surname>Clare</surname> <given-names>F</given-names></name>, <etal>et al</etal>. <article-title>Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage</article-title>. <source>Proc Natl Acad Sci</source>. <year>2011</year> <month>Nov</month> <day>15</day>;<volume>108</volume>(<issue>46</issue>):<fpage>18732</fpage>–<lpage>6</lpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1073/pnas.1111915108" xlink:type="simple">10.1073/pnas.1111915108</ext-link></comment> <object-id pub-id-type="pmid">22065772</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref010"><label>10</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Fisher</surname> <given-names>MC</given-names></name>, <name name-style="western"><surname>Garner</surname> <given-names>TWJ</given-names></name>, <name name-style="western"><surname>Walker</surname> <given-names>SF</given-names></name>. <article-title>Global emergence of <italic>Batrachochytrium dendrobatidis</italic> and amphibian chytridiomycosis in space, time, and host</article-title>. <source>Annu Rev Microbiol</source>. <year>2009</year>;<volume>63</volume>(<issue>1</issue>):<fpage>291</fpage>–<lpage>310</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref011"><label>11</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>James</surname> <given-names>TY</given-names></name>, <name name-style="western"><surname>Litvintseva</surname> <given-names>AP</given-names></name>, <name name-style="western"><surname>Vilgalys</surname> <given-names>R</given-names></name>, <name name-style="western"><surname>Morgan</surname> <given-names>JAT</given-names></name>, <name name-style="western"><surname>Taylor</surname> <given-names>JW</given-names></name>, <name name-style="western"><surname>Fisher</surname> <given-names>MC</given-names></name>, <etal>et al</etal>. <article-title>Rapid global expansion of the fungal disease chytridiomycosis into declining and healthy amphibian populations</article-title>. <source>PLoS Pathog</source>. <year>2009</year> <month>May</month> <day>29</day>;<volume>5</volume>(<issue>5</issue>):<fpage>e1000458</fpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1371/journal.ppat.1000458" xlink:type="simple">10.1371/journal.ppat.1000458</ext-link></comment> <object-id pub-id-type="pmid">19478871</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref012"><label>12</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Velo-Antón</surname> <given-names>G</given-names></name>, <name name-style="western"><surname>Rodríguez</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Savage</surname> <given-names>AE</given-names></name>, <name name-style="western"><surname>Parra-Olea</surname> <given-names>G</given-names></name>, <name name-style="western"><surname>Lips</surname> <given-names>KR</given-names></name>, <name name-style="western"><surname>Zamudio</surname> <given-names>KR</given-names></name>. <article-title>Amphibian-killing fungus loses genetic diversity as it spreads across the New World</article-title>. <source>Biol Conserv</source>. <year>2012</year> <month>Feb</month>;<volume>146</volume>(<issue>1</issue>):<fpage>213</fpage>–<lpage>8</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref013"><label>13</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Phillips</surname> <given-names>BL</given-names></name>, <name name-style="western"><surname>Puschendorf</surname> <given-names>R</given-names></name>. <article-title>Do pathogens become more virulent as they spread? Evidence from the amphibian declines in Central America</article-title>. <source>Proc R Soc B Biol Sci</source> [Internet]. <year>2013</year> <month>Sep</month> <day>7</day> [cited 2013 Jul 29];<volume>280</volume>(<issue>1766</issue>). Available: <ext-link ext-link-type="uri" xlink:href="http://rspb.royalsocietypublishing.org/content/280/1766/20131290" xlink:type="simple">http://rspb.royalsocietypublishing.org/content/280/1766/20131290</ext-link></mixed-citation></ref>
<ref id="pone.0155745.ref014"><label>14</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Pounds</surname> <given-names>JA</given-names></name>, <name name-style="western"><surname>Crump</surname> <given-names>ML</given-names></name>. <article-title>Amphibian declines and climate disturbance: the case of the Golden Toad and the Harlequin Frog</article-title>. <source>Conserv Biol</source>. <year>1994</year> <month>Mar</month> <day>1</day>;<volume>8</volume>(<issue>1</issue>):<fpage>72</fpage>–<lpage>85</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref015"><label>15</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Pounds</surname> <given-names>JA</given-names></name>, <name name-style="western"><surname>Fogden</surname> <given-names>MPL</given-names></name>, <name name-style="western"><surname>Savage</surname> <given-names>JM</given-names></name>, <name name-style="western"><surname>Gorman</surname> <given-names>GC</given-names></name>. <article-title>Tests of null models for amphibian declines on a tropical mountain</article-title>. <source>Conserv Biol</source>. <year>1997</year>;<volume>11</volume>(<issue>6</issue>):<fpage>1307</fpage>–<lpage>22</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref016"><label>16</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Lips</surname> <given-names>KR</given-names></name>. <article-title>Mass mortality and population declines of anurans at an upland site in western Panama</article-title>. <source>Conserv Biol</source>. <year>1999</year>;<volume>13</volume>(<issue>1</issue>):<fpage>117</fpage>–<lpage>25</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref017"><label>17</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Lips</surname> <given-names>KR</given-names></name>. <article-title>Decline of a tropical montane amphibian fauna</article-title>. <source>Conserv Biol</source>. <year>1998</year>;<volume>12</volume>(<issue>1</issue>):<fpage>106</fpage>–<lpage>17</lpage>.</mixed-citation></ref>
<ref id="pone.0155745.ref018"><label>18</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Lips</surname> <given-names>KR</given-names></name>, <name name-style="western"><surname>Brem</surname> <given-names>F</given-names></name>, <name name-style="western"><surname>Brenes</surname> <given-names>R</given-names></name>, <name name-style="western"><surname>Reeve</surname> <given-names>JD</given-names></name>, <name name-style="western"><surname>Alford</surname> <given-names>RA</given-names></name>, <name name-style="western"><surname>Voyles</surname> <given-names>J</given-names></name>, <etal>et al</etal>. <article-title>Emerging infectious disease and the loss of biodiversity in a neotropical amphibian community</article-title>. <source>Proc Natl Acad Sci U S A</source>. <year>2006</year> <month>Feb</month> <day>28</day>;<volume>103</volume>(<issue>9</issue>):<fpage>3165</fpage>–<lpage>70</lpage>. <object-id pub-id-type="pmid">16481617</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref019"><label>19</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Woodhams</surname> <given-names>DC</given-names></name>, <name name-style="western"><surname>Kilburn</surname> <given-names>VL</given-names></name>, <name name-style="western"><surname>Reinert</surname> <given-names>LK</given-names></name>, <name name-style="western"><surname>Voyles</surname> <given-names>J</given-names></name>, <name name-style="western"><surname>Medina</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Ibáñez</surname> <given-names>R</given-names></name>, <etal>et al</etal>. <article-title>Chytridiomycosis and amphibian population declines continue to spread eastward in Panama</article-title>. <source>EcoHealth</source>. <year>2008</year> <month>Sep</month> <day>1</day>;<volume>5</volume>(<issue>3</issue>):<fpage>268</fpage>–<lpage>74</lpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1007/s10393-008-0190-0" xlink:type="simple">10.1007/s10393-008-0190-0</ext-link></comment> <object-id pub-id-type="pmid">18807089</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref020"><label>20</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Rebollar</surname> <given-names>EA</given-names></name>, <name name-style="western"><surname>Hughey</surname> <given-names>MC</given-names></name>, <name name-style="western"><surname>Harris</surname> <given-names>RN</given-names></name>, <name name-style="western"><surname>Domangue</surname> <given-names>RJ</given-names></name>, <name name-style="western"><surname>Medina</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Ibáñez</surname> <given-names>R</given-names></name>, <etal>et al</etal>. <article-title>The lethal fungus <italic>Batrachochytrium dendrobatidis</italic> is present in lowland tropical forests of far eastern Panamá</article-title>. <source>PLoS ONE</source>. <year>2014</year> <month>Apr</month> <day>16</day>;<volume>9</volume>(<issue>4</issue>):<fpage>e95484</fpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1371/journal.pone.0095484" xlink:type="simple">10.1371/journal.pone.0095484</ext-link></comment> <object-id pub-id-type="pmid">24740162</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref021"><label>21</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Hyatt</surname> <given-names>A</given-names></name>, <name name-style="western"><surname>Boyle</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Olsen</surname> <given-names>V</given-names></name>, <name name-style="western"><surname>Boyle</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Berger</surname> <given-names>L</given-names></name>, <name name-style="western"><surname>Obendorf</surname> <given-names>D</given-names></name>, <etal>et al</etal>. <article-title>Diagnostic assays and sampling protocols for the detection of <italic>Batrachochytrium dendrobatidis</italic></article-title>. <source>Dis Aquat Organ</source>. <year>2007</year>;<volume>73</volume>:<fpage>175</fpage>–<lpage>92</lpage>. <object-id pub-id-type="pmid">17330737</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref022"><label>22</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Sluys</surname> <given-names>MV</given-names></name>, <name name-style="western"><surname>Kriger</surname> <given-names>KM</given-names></name>, <name name-style="western"><surname>Phillott</surname> <given-names>AD</given-names></name>, <name name-style="western"><surname>Campbell</surname> <given-names>R</given-names></name>, <name name-style="western"><surname>Skerratt</surname> <given-names>LF</given-names></name>, <name name-style="western"><surname>Hero</surname> <given-names>JM</given-names></name>. <article-title>Storage of samples at high temperatures reduces the amount of amphibian chytrid fungus <italic>Batrachochytrium dendrobatidis</italic> DNA detectable by PCR assay</article-title>. <source>Dis Aquat Organ</source>. <year>2008</year> <month>Aug</month> <day>27</day>;<volume>81</volume>(<issue>2</issue>):<fpage>93</fpage>–<lpage>7</lpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.3354/dao01953" xlink:type="simple">10.3354/dao01953</ext-link></comment> <object-id pub-id-type="pmid">18924373</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref023"><label>23</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Boyle</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Boyle</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Olsen</surname> <given-names>V</given-names></name>, <name name-style="western"><surname>Morgan</surname> <given-names>J</given-names></name>, <name name-style="western"><surname>Hyatt</surname> <given-names>A</given-names></name>. <article-title>Rapid quantitative detection of chytridiomycosis (<italic>Batrachochytrium dendrobatidis</italic>) in amphibian samples using real-time Taqman PCR assay</article-title>. <source>Dis Aquat Organ</source>. <year>2004</year>;<volume>60</volume>:<fpage>141</fpage>–<lpage>8</lpage>. <object-id pub-id-type="pmid">15460858</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref024"><label>24</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Kriger</surname> <given-names>KM</given-names></name>, <name name-style="western"><surname>Hero</surname> <given-names>J</given-names></name>, <name name-style="western"><surname>Ashton</surname> <given-names>KJ</given-names></name>. <article-title>Cost efficiency in the detection of chytridiomycosis using PCR assay</article-title>. <source>Dis Aquat Organ</source>. <year>2006</year> <month>Jul</month> <day>25</day>;<volume>71</volume>(<issue>2</issue>):<fpage>149</fpage>–<lpage>54</lpage>. <object-id pub-id-type="pmid">16956062</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref025"><label>25</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Skerratt</surname> <given-names>LF</given-names></name>, <name name-style="western"><surname>Berger</surname> <given-names>L</given-names></name>, <name name-style="western"><surname>Hines</surname> <given-names>HB</given-names></name>, <name name-style="western"><surname>McDonald</surname> <given-names>KR</given-names></name>, <name name-style="western"><surname>Mendez</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Speare</surname> <given-names>R</given-names></name>. <article-title>Survey protocol for detecting chytridiomycosis in all Australian frog populations</article-title>. <source>Dis Aquat Organ</source>. <year>2008</year> <month>Jul</month> <day>7</day>;<volume>80</volume>(<issue>2</issue>):<fpage>85</fpage>–<lpage>94</lpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.3354/dao01923" xlink:type="simple">10.3354/dao01923</ext-link></comment> <object-id pub-id-type="pmid">18717061</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref026"><label>26</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Johnson</surname> <given-names>ML</given-names></name>, <name name-style="western"><surname>Speare</surname> <given-names>R</given-names></name>. <article-title>Possible modes of dissemination of the amphibian chytrid <italic>Batrachochytrium dendrobatidis</italic> in the environment</article-title>. <source>Dis Aquat Organ</source>. <year>2005</year> <month>Jul</month> <day>18</day>;<volume>65</volume>(<issue>3</issue>):<fpage>181</fpage>–<lpage>6</lpage>. <object-id pub-id-type="pmid">16119886</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref027"><label>27</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Lampert</surname> <given-names>KP</given-names></name>, <name name-style="western"><surname>Rand</surname> <given-names>AS</given-names></name>, <name name-style="western"><surname>Mueller</surname> <given-names>UG</given-names></name>, <name name-style="western"><surname>Ryan</surname> <given-names>MJ</given-names></name>. <article-title>Fine-scale genetic pattern and evidence for sex-biased dispersal in the túngara frog, <italic>Physalaemus pustulosus</italic></article-title>. <source>Mol Ecol</source>. <year>2003</year> <month>Dec</month> <day>1</day>;<volume>12</volume>(<issue>12</issue>):<fpage>3325</fpage>–<lpage>34</lpage>. <object-id pub-id-type="pmid">14629349</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref028"><label>28</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Küng</surname> <given-names>D</given-names></name>, <name name-style="western"><surname>Bigler</surname> <given-names>L</given-names></name>, <name name-style="western"><surname>Davis</surname> <given-names>LR</given-names></name>, <name name-style="western"><surname>Gratwicke</surname> <given-names>B</given-names></name>, <name name-style="western"><surname>Griffith</surname> <given-names>E</given-names></name>, <name name-style="western"><surname>Woodhams</surname> <given-names>DC</given-names></name>. <article-title>Stability of microbiota facilitated by host immune regulation: informing probiotic strategies to manage amphibian disease</article-title>. <source>PLoS ONE</source>. <year>2014</year> <month>Jan</month> <day>29</day>;<volume>9</volume>(<issue>1</issue>):<fpage>e87101</fpage>. <comment>doi: <ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1371/journal.pone.0087101" xlink:type="simple">10.1371/journal.pone.0087101</ext-link></comment> <object-id pub-id-type="pmid">24489847</object-id></mixed-citation></ref>
<ref id="pone.0155745.ref029"><label>29</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Marsh</surname> <given-names>DM</given-names></name>, <name name-style="western"><surname>Fegraus</surname> <given-names>EH</given-names></name>, <name name-style="western"><surname>Harrison</surname> <given-names>S</given-names></name>. <article-title>Effects of breeding pond isolation on the spatial and temporal dynamics of pond use by the Tungara frog, <italic>Physalaemus pustulosus</italic></article-title>. <source>J Anim Ecol</source>. <year>1999</year> <month>Jul</month> <day>1</day>;<volume>68</volume>(<issue>4</issue>):<fpage>804</fpage>–<lpage>14</lpage>.</mixed-citation></ref>
</ref-list>
</back>
</article>